LOCUS       NM_059292                604 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans Homeobox protein ceh-12 (ceh-12), mRNA.
ACCESSION   NM_059292
VERSION     NM_059292.2
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 604)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 604)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 604)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003279).
            
            On Sep 4, 2019 this sequence version replaced NM_059292.1.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="I"
     gene            1..604
                     /gene="ceh-12"
                     /locus_tag="CELE_F33D11.4"
                     /db_xref="GeneID:172255"
                     /db_xref="WormBase:WBGene00000436"
     CDS             8..550
                     /gene="ceh-12"
                     /locus_tag="CELE_F33D11.4"
                     /standard_name="F33D11.4a"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="Homeobox protein ceh-12"
                     /protein_id="NP_491693.1"
                     /db_xref="EnsemblGenomes-Gn:WBGene00000436"
                     /db_xref="GeneID:172255"
                     /db_xref="WormBase:WBGene00000436"
                     /translation="

MMFSSIDSLLKISTSSQNEDQKLESHPSPPSQIPNYSTSCSEELMKMAAKAAQFAAQASLENSFSSSTSPTSTVTPLSAYTSLVQPVLPLIYDHLALTYSVNAWQAWGKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKRCPSSTPIQSTSSS"

     misc_feature    order(338..352,356..358,407..409,425..427,464..466,
                     470..475,482..487,491..499,503..508)
                     /gene="ceh-12"
                     /locus_tag="CELE_F33D11.4"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    344..505
                     /gene="ceh-12"
                     /locus_tag="CELE_F33D11.4"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
     misc_feature    order(344..346,353..355,473..475,482..487,494..496)
                     /gene="ceh-12"
                     /locus_tag="CELE_F33D11.4"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
ORIGIN      

tttcagaatgatgttttcctcaatagattctcttcttaaaatctcaacttcttctcaaaatgaagatcaaaaattagagagtcacccctcccctccatcacaaattccaaattattcaaccagctgctctgaggaattaatgaaaatggcggcaaaagcagcccaatttgctgctcaagcctcgctggagaactcattttccagttctacttctcccacatcaactgttactccactttctgcatacacgtcactggttcagccggtccttcctttgatctacgatcatttagcattaacatattcagtaaatgcatggcaagcatggggaaagatgagaagaccacgaaccgcattcagcagtgaacaattagttcaattagagaaacaattctcagataatcgatatttgagtagaccaagaagatatcaattggcacaacaattatctctttcagagactcagatcaaaatctggttccaaaatcgtcgaatgaaaaacaaacgttgcccatcttcaactccaattcaatcaacttcctcttcttgataatctttttatatttgatcacttttacttaataaattcttaatcaaaagacaa

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