LOCUS       NM_058992                914 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans Homeobox protein ceh-17 (ceh-17), mRNA.
ACCESSION   NM_058992
VERSION     NM_058992.6
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 914)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 914)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 914)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003279).
            
            On Feb 2, 2021 this sequence version replaced NM_058992.5.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="I"
     gene            1..914
                     /gene="ceh-17"
                     /locus_tag="CELE_D1007.1"
                     /db_xref="GeneID:172059"
                     /db_xref="WormBase:WBGene00000440"
     CDS             4..717
                     /gene="ceh-17"
                     /locus_tag="CELE_D1007.1"
                     /standard_name="D1007.1"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="Homeobox protein ceh-17"
                     /protein_id="NP_491393.1"
                     /db_xref="EnsemblGenomes-Gn:WBGene00000440"
                     /db_xref="EnsemblGenomes-Tr:D1007.1"
                     /db_xref="GeneID:172059"
                     /db_xref="GOA:G5EC89"
                     /db_xref="InterPro:IPR001356"
                     /db_xref="InterPro:IPR009057"
                     /db_xref="InterPro:IPR017970"
                     /db_xref="InterPro:IPR022135"
                     /db_xref="UniProtKB/TrEMBL:G5EC89"
                     /db_xref="WormBase:WBGene00000440"
                     /translation="

MMMEYGGYFSSSAVAQQSGDVPTTAPSAVTNSFFYTPQSHNIYHQYATPYLQSGRALTTAHNTSSSSAGNSTSSSSSSSNYRNTTHDSLQAFFNTGLQYQLYQKSQLIGSDTIQRTSSNVLNGLPRSSLVGALCSTGGAPLNPAERRKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEARVQVWFQNRRAKYRKQEKIRRVKDEEEDPLKKEPGQISLEEIIDQI"

     misc_feature    58..339
                     /gene="ceh-17"
                     /locus_tag="CELE_D1007.1"
                     /note="Homeobox protein distal-less-like N terminal;
                     Region: DLL_N; pfam12413"
                     /db_xref="CDD:432536"
     misc_feature    order(451..465,469..471,520..522,538..540,577..579,
                     583..588,595..600,604..612,616..621)
                     /gene="ceh-17"
                     /locus_tag="CELE_D1007.1"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(457..459,466..468,586..588,595..600,607..609)
                     /gene="ceh-17"
                     /locus_tag="CELE_D1007.1"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    460..618
                     /gene="ceh-17"
                     /locus_tag="CELE_D1007.1"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
ORIGIN      

gcgatgatgatggaatacggtggctatttttcaagtagcgccgtggctcaacaatcaggcgatgttccaacaactgcaccatctgcagttacaaattcatttttctatacaccacagtcacataatatttatcaccaatatgcaactccgtatctacaaagtggacgtgccttgacaactgctcacaatacttcaagctcttcagcgggcaattccacatcttcatcatcttcctcatcaaactaccgtaatacaacacacgattcactacaagctttttttaatactggtctacaatatcagttgtatcaaaaatcacaattaattggaagtgatacgattcagaggacaagtagcaatgttttgaacggactgccaagaagttctcttgttggtgctctctgctcaaccggtggagctcctttgaaccctgccgagcgtcgaaaacaacgccgaatccgtaccacattcacatcaggacaactgaaggagttggaaagatcattctgtgaaactcattatccagatatttatacacgagaagaaattgcaatgagaattgatttaactgaagcccgagttcaagtgtggtttcagaatcggcgggcgaagtatcgaaaacaggagaagatcagaagagttaaggacgaggaagaggatccgttgaagaaggaacccgggcaaattagtttagaagagattattgatcaaatttgaacaaaaaatgtaaaataattgcttgtgatctctatttatctcttcctttttgtaattattcaaaagtagtgctcacttaaaattgtataaaagtaaaaaaccgtgctgaatgtgtctctatgtcagttttttgtccagaatcccattgcttctcactttttcaatttattgtttttttcaggaataaatataagttc

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