2024-05-02 18:49:20, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001368584 678 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans DUF998 domain-containing protein (Y14H12A.5), mRNA. ACCESSION NM_001368584 VERSION NM_001368584.2 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 678) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 678) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 678) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 678) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On May 27, 2020 this sequence version replaced NM_001368584.1. FEATURES Location/Qualifiers source 1..678 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="II" gene 1..678 /gene="Y14H12A.5" /locus_tag="CELE_Y14H12A.5" /db_xref="GeneID:39010821" /db_xref="WormBase:WBGene00303364" CDS 48..614 /gene="Y14H12A.5" /locus_tag="CELE_Y14H12A.5" /standard_name="Y14H12A.5" /note="Confirmed by transcript evidence" /codon_start=1 /product="DUF998 domain-containing protein" /protein_id="NP_001355421.2" /db_xref="GeneID:39010821" /db_xref="GOA:A0A3B1E9Z2" /db_xref="InterPro:IPR009545" /db_xref="UniProtKB/TrEMBL:A0A3B1E9Z2" /db_xref="WormBase:WBGene00303364" /translation="
MKKCMTTLKLTALFFSIVISGILNAFSVYLPYWNLDKPSHTKSVSVIFQKGLFPIHWKQNPTFFNAVTVMMLVSSGVLICLFLMFLLSLMAILCHSARQVKIGFRLCAVITVLAGLFQLYSFIIMAIEFSLNKTPNWRIGGSKINNGCEYLALVSAIIDLFVISYLSIISSRISLAKSSKRNSILIWT"
misc_feature 66..563 /gene="Y14H12A.5" /locus_tag="CELE_Y14H12A.5" /note="Tight junction protein, Claudin-like; Region: Claudin_3; pfam06653" /db_xref="CDD:399563" ORIGIN
tagacacagtttccaatttaaaattattattactcgttagtaaaaaaatgaaaaaatgtatgactacactcaaattgaccgcactattcttttctatcgttatttccggaattctcaatgcattttccgtttatttaccctattggaatctggataagccttcacatacaaaaagtgtttcagtaatttttcaaaaaggactttttccgattcattggaagcaaaatccaacattcttcaatgcagttacggttatgatgttggtgtcatctggtgtattaatttgtcttttcttaatgtttttgctatccctaatggcaattctgtgccactcagctcgtcaagtcaaaattggcttccgcttgtgcgcagtcatcaccgttttggcgggactttttcaactttattcatttatcattatggcaattgagtttagtcttaataaaacaccgaattggagaataggtggtagtaaaataaataatgggtgtgaatatttggcactggtttcagcgattattgatttatttgttatttcttatttatcgattatttcatctaggatatcacttgcaaaatcttcaaaacgaaattcaattttaatttggacatgattcacggggagctttgttttactcgtagctttgattgattttcaataaaatgtgatattcacga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]