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2021-12-06 05:59:11, GGRNA : RefSeq release 208 (Sep, 2021)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Arabidopsis thaliana CLAVATA3 (CLV3), mRNA. (616 bp)
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink)." /codon_start=1 /product="CLAVATA3" /protein_id="NP_973541.1" /db_xref="Araport:AT2G27250" /db_xref="GeneID:817267" /db_xref="TAIR:AT2G27250" /translation="MDSYKSQHNFFLLFTISPDLTQAHAHVQGLSNRKMMMMKMESEWVGANGEAEKAKTKGLGLHEELRTVPSGPDPLHHHVNPPRQPRNNFQLP" ORIGIN // REFERENCE 1 (bases 1 to 616) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S.,...
AA_position 72
Synonym: AtCLV3; CLAVATA3; F12K2.17; F12K2_17
NM_201812.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana CLAVATA3 (CLV3), mRNA. (783 bp)
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink)." /codon_start=1 /product="CLAVATA3" /protein_id="NP_565641.2" /db_xref="Araport:AT2G27250" /db_xref="GeneID:817267" /db_xref="TAIR:AT2G27250" /translation="MSGPVQQLFHCFSCHEKYLYILLWCAKHSKMLFNWQMMMMKMESEWVGANGEAEKAKTKGLGLHEELRTVPSGPDPLHHHVNPPRQPRNNFQLP" ORIGIN // REFERENCE 1 (bases 1 to 783) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S...
AA_position 74
Synonym: AtCLV3; CLAVATA3; F12K2.17; F12K2_17
NM_128283.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana CLAVATA3 (CLV3), mRNA. (552 bp)
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /codon_start=1 /product="CLAVATA3" /protein_id="NP_001118398.1" /db_xref="Araport:AT2G27250" /db_xref="GeneID:817267" /db_xref="TAIR:AT2G27250" /translation="MDSKSFLLLLLLFCFLFLHDASDLTQAHAHVQGLSNRKMMMMKMESEWVGANGEAEKAKTKGLGLHEELRTVPSGPDPLHHHVNPPRQPRNNFQLP" ORIGIN // REFERENCE 1 (bases 1 to 552) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van...
AA_position 76
Synonym: AtCLV3; CLAVATA3; F12K2.17; F12K2_17
NM_001124926.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/at/aa%3aPDPLHHH
lang : en | div : | spe : at | query_string : aa:PDPLHHH | format : html | download :

0.000 | 0.000 | search_start;
0.085 | 0.085 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:PDPLHHH)?source=Arabidopsis thaliana (thale cress)?to=0&format=json
0.097 | 0.012 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:PDPLHHH)?source=Arabidopsis thaliana (thale cress)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.097 | 0.000 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]