LOCUS       NM_128854               3123 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana Argonaute family protein (AGO6), mRNA.
ACCESSION   NM_128854
VERSION     NM_128854.4
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 3123)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 3123)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 3123)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003071).
            
            On Sep 12, 2016 this sequence version replaced NM_128854.3.
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     gene            1..3123
                     /gene="AGO6"
                     /locus_tag="AT2G32940"
                     /gene_synonym="ARGONAUTE 6; T21L14.12; T21L14_12"
                     /note="Encodes a nuclear localized 879-amino-acid protein
                     that contains conserved PAZ and PIWI domains that is
                     important for the accumulation of specific
                     heterochromatin-related siRNAs, and for DNA methylation
                     and transcriptional gene silencing."
                     /db_xref="Araport:AT2G32940"
                     /db_xref="GeneID:817856"
                     /db_xref="TAIR:AT2G32940"
     CDS             185..2821
                     /gene="AGO6"
                     /locus_tag="AT2G32940"
                     /gene_synonym="ARGONAUTE 6; T21L14.12; T21L14_12"
                     /inference="Similar to RNA sequence,
                     EST:INSD:DR383728.1,INSD:DR363588.1,INSD:EL108990.1"
                     /note="ARGONAUTE 6 (AGO6); CONTAINS InterPro DOMAIN/s:
                     Domain of unknown function DUF1785 (InterPro:IPR014811),
                     Stem cell self-renewal protein Piwi (InterPro:IPR003165),
                     Polynucleotidyl transferase, ribonuclease H fold
                     (InterPro:IPR012337), Argonaute/Dicer protein, PAZ
                     (InterPro:IPR003100); BEST Arabidopsis thaliana protein
                     match is: Argonaute family protein (TAIR:AT5G21150.1); Has
                     35333 Blast hits to 34131 proteins in 2444 species: Archae
                     - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
                     Plants - 531; Viruses - 0; Other Eukaryotes - 9610
                     (source: NCBI BLink)."
                     /codon_start=1
                     /product="Argonaute family protein"
                     /protein_id="NP_180853.2"
                     /db_xref="Araport:AT2G32940"
                     /db_xref="GeneID:817856"
                     /db_xref="TAIR:AT2G32940"
                     /translation="

METSSSLPLSPISIEPEQPSHRDYDITTRRGVGTTGNPIELCTNHFNVSVRQPDVVFYQYTVSITTENGDAVDGTGISRKLMDQLFKTYSSDLDGKRLAYDGEKTLYTVGPLPQNEFDFLVIVEGSFSKRDCGVSDGGSSSGTCKRSKRSFLPRSYKVQIHYAAEIPLKTVLGTQRGAYTPDKSAQDALRVLDIVLRQQAAERGCLLVRQAFFHSDGHPMKVGGGVIGIRGLHSSFRPTHGGLSLNIDVSTTMILEPGPVIEFLKANQSVETPRQIDWIKAAKMLKHMRVKATHRNMEFKIIGLSSKPCNQQLFSMKIKDGEREVPIREITVYDYFKQTYTEPISSAYFPCLDVGKPDRPNYLPLEFCNLVSLQRYTKPLSGRQRVLLVESSRQKPLERIKTLNDAMHTYCYDKDPFLAGCGISIEKEMTQVEGRVLKPPMLKFGKNEDFQPCNGRWNFNNKMLLEPRAIKSWAIVNFSFPCDSSHISRELISCGMRKGIEIDRPFALVEEDPQYKKAGPVERVEKMIATMKLKFPDPPHFILCILPERKTSDIYGPWKKICLTEEGIHTQCICPIKISDQYLTNVLLKINSKLGGINSLLGIEYSYNIPLINKIPTLILGMDVSHGPPGRADVPSVAAVVGSKCWPLISRYRAAVRTQSPRLEMIDSLFQPIENTEKGDNGIMNELFVEFYRTSRARKPKQIIIFRDGVSESQFEQVLKIEVDQIIKAYQRLGESDVPKFTVIVAQKNHHTKLFQAKGPENVPAGTVVDTKIVHPTNYDFYMCAHAGKIGTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQVAQFTKFEGISEDGKVPELPRLHENVEGNMFFC"

     misc_feature    227..2818
                     /gene="AGO6"
                     /locus_tag="AT2G32940"
                     /gene_synonym="ARGONAUTE 6; T21L14.12; T21L14_12"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
ORIGIN      

aagtgaaatatattttaattttcccatcactggaaacgttccctccattcttttgcttgtctgggaaacccaaagagactgtgacggagaagagaaatgagctaaataaattcctctctttgattcaccggaaccctagaaatcctcttcttaattctttcaaagattattttcccctggaaggatggagacatcttcatctctgccactgtcacccataagtatagaaccagaacagcccagccatcgagattatgacatcacaactagacgtggggttggaaccacaggcaacccaatagaattgtgcaccaatcactttaatgtttctgtgagacagccggatgtagtattttaccagtacactgttagtatcaccacagaaaacggtgatgctgttgatgggacaggaataagcagaaagcttatggaccaactattcaagacttactcttctgatcttgatggtaaaaggttggcatatgatggagagaagactttatatactgttggtcctctaccacagaacgaatttgactttctagtcatcgtggaagggtcattttcaaaacgtgattgtggtgtctctgatggtggtagttcttccggtacttgcaagcgatcaaaacgttctttcttgccaagaagttacaaggttcagatacattatgctgcagaaataccgttgaagactgttcttggcactcagagaggagcttatacaccagataagagtgctcaggatgcacttagagtgcttgacattgtactgaggcagcaagcagctgaaaggggatgccttttggtcagacaggcatttttccatagcgatgggcaccccatgaaagttggaggaggtgttataggtattcgaggtttacattcgagctttcgtccaactcatggaggactctcgcttaacattgatgtgtcaacaacaatgatcttagaacctggtccagttattgaattcctgaaagccaatcagagtgttgagacaccacggcaaatcgactggattaaggctgcgaaaatgcttaaacatatgagggttaaggcaacacaccgtaacatggaatttaaaattataggtctaagttcgaaaccgtgcaatcagcaactgttttcaatgaagattaaagatggtgaacgtgaggtacctattagagagattactgtgtatgactatttcaagcaaacctacacagagcctatttcttctgcgtactttccatgccttgatgttggcaagccagatcggcccaactatcttccactggagttttgtaatcttgtatctctgcaacgttatacaaaaccattgtcagggaggcaaagagttttacttgttgaaagttcaagacaaaaacctctagagagaattaaaacactcaatgatgcaatgcatacctactgctatgacaaggacccatttttggctggatgtggcatctccattgaaaaagaaatgactcaagttgaaggccgtgttctcaagcccccaatgctgaagtttggcaagaatgaagattttcaaccttgcaacggacggtggaactttaacaacaagatgcttctagaaccaagagctattaaaagctgggctatcgtcaacttttcttttccatgcgacagtagtcacatttcccgtgagcttataagctgtggcatgaggaaaggcattgaaattgatcgaccttttgcactagttgaagaggatccacagtacaaaaaagcaggtcctgttgaaagggtagaaaaaatgattgcaacgatgaagttaaaatttccagatcctcctcattttatcctctgtattctgccagaacggaaaacttctgatatctatggtccctggaagaagatatgcctcactgaagaagggatccacacacaatgcatctgcccaatcaagatcagtgaccaatatctcaccaatgtacttctgaagataaattcgaagcttggaggcatcaattctctgttgggaatagagtactcttacaacattccattgataaacaaaattcccaccttgattttgggtatggatgtatctcatgggcctccaggtcgggcagatgttccttcagtagcagcggttgttggttcaaaatgctggcccttaatctcaaggtatagggcagctgtaagaactcagtcaccacgtctggagatgattgattcgctcttccaacctatcgagaacactgagaaaggagataacggtatcatgaacgaattatttgtagagttctatcggacaagcagggcacggaaacctaagcagattatcattttcagggatggtgtgagtgaatcacagttcgagcaagtcttgaagatcgaagtggaccaaattataaaggcgtatcaacgtcttggtgaatctgatgtgccaaaattcactgtcattgtggctcagaagaaccaccacaccaagttgtttcaagctaagggtcctgaaaatgttcctgcaggaactgtcgtggacaccaagatcgtacacccgacaaactacgatttttacatgtgtgctcatgcaggaaaaataggaacttcaagaccggctcattaccatgtattacttgatgagattggtttctcccccgatgacttgcagaatctcatccattctctctcctatgtcaaccaacgtagcacaactgcaacttcgatcgtggctccagtacgatacgctcatcttgcagcagctcaagttgcgcaattcacaaagtttgaaggtatatcggaggacgggaaagttccagagcttccacgtctgcacgagaatgtcgaaggcaacatgttcttctgctgagtacatataagtagttctgcttcctccctagtctaaacccaaaccctcctctttagaggaagtttatcattttgcatatatgcaatcatcaccgtacagtttcattagaagtaagaagaaagatcctcgcgtagattaagaggctcattggcttattgatagcccaagtttgcttactaaacggcagcgatttttgcgtttagcttttggatttttcaatacgttatattaaattttcttttttgttttgtgacgggactcacaaagggaaatgaaaagtgagaaaaactcttgacgtaaaa

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