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Previous release (v1)
2024-05-06 17:04:48, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_122039 5666 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana dicer-like 4 (DCL4), mRNA.
ACCESSION NM_122039
VERSION NM_122039.5
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 5666)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 5666)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5666)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 5666)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003076).
On Sep 12, 2016 this sequence version replaced NM_122039.4.
FEATURES Location/Qualifiers
source 1..5666
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
gene 1..5666
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="Encodes an RNase III-like enzyme that catalyzes
processing of trans-acting small interfering RNA
precursors in a distinct small RNA biogenesis pathway. The
protein is also involved in the production of 21-nt
primary siRNAs from both inverted-repeat constructs and
endogenous sequences, as well as the RDR6-dependent 21-nt
secondary siRNAs involved in long-range cell-to-cell
signaling. It binds DRB4, a ds-RNA binding protein."
/db_xref="Araport:AT5G20320"
/db_xref="GeneID:832154"
/db_xref="TAIR:AT5G20320"
CDS 199..5307
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/inference="Similar to RNA sequence,
EST:INSD:EG516431.1,INSD:EG444778.1,INSD:DR379871.1,
INSD:DR282135.1,INSD:ES129452.1,INSD:EG516429.1,
INSD:ES160742.1,INSD:EL094925.1,INSD:ES060053.1,
INSD:ES020542.1,INSD:EG444780.1,INSD:ES192314.1,
INSD:ES037607.1,INSD:AV547573.1,INSD:EH908718.1"
/inference="similar to RNA sequence, mRNA:INSD:DQ118423.1"
/note="dicer-like 4 (DCL4); CONTAINS InterPro DOMAIN/s:
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
(InterPro:IPR011545), Double-stranded RNA-binding
(InterPro:IPR001159), Argonaute/Dicer protein, PAZ
(InterPro:IPR003100), Ribonuclease III
(InterPro:IPR000999), Double-stranded RNA-binding-like
(InterPro:IPR014720), DEAD-like helicase, N-terminal
(InterPro:IPR014001), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Dicer double-stranded RNA-binding
fold (InterPro:IPR005034), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: dicer-like 2
(TAIR:AT3G03300.3); Has 20138 Blast hits to 15531 proteins
in 2958 species: Archae - 325; Bacteria - 10957; Metazoa -
2671; Fungi - 1592; Plants - 1161; Viruses - 33; Other
Eukaryotes - 3399 (source: NCBI BLink)."
/codon_start=1
/product="dicer-like 4"
/protein_id="NP_197532.3"
/db_xref="GeneID:832154"
/db_xref="TAIR:AT5G20320"
/db_xref="Araport:AT5G20320"
/translation="
MRDEVDLSLTIPSKLLGKRDREQKNCEEEKNKNKKAKKQQKDPILLHTSAATHKFLPPPLTMPYSEIGDDLRSLDFDHADVSSDLHLTSSSSVSSFSSSSSSLFSAAGTDDPSPKMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYELGHLVLSPKKSVCIFLAPTVALVEQQAKVIADSVNFKVAIHCGGKRIVKSHSEWEREIAANEVLVMTPQILLHNLQHCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQRPRIFGMTASPVVGKGSFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRSALSDASQSTIRYENMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGLWGAIQAAKIQLNSDHNVQDEPVGKNPKSKICDTYLSMAAEALSSGVAKDENASDLLSLAALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFLVGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARMPQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRLDEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCSRGDLYEMRVPVLFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMKSPLPVEAETMDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELIPDFVPLELQDSSRTSKSTFYLLLPLCLHDGESVISVDWVTIRNCLSSPIFKTPSVLVEDIFPPSGSHLKLANGCWNIDDVKNSLVFTTYSKQFYFVADICHGRNGFSPVKESSTKSHVESIYKLYGVELKHPAQPLLRVKPLCHVRNLLHNRMQTNLEPQELDEYFIEIPPELSHLKIKGLSKDIGSSLSLLPSIMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFGHPCRVTCDEVASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTRNNLETLENQLDYKFLHKGLLVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCPKVLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISATKKDGAFTVELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKAHENITTSHPLEDVLKNGIRNEAKLIGYNEDPIDVVDLVGLDVENLNILETFGGNSERSSSYVIRRGLPQAPSKTEDRLPQKAIIKAGGPSSKTAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMTLECYGEARATKKGAAEHAAQAAIWCLKHSGFLC"
misc_feature 562..1161
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="DEXH-box helicase domain of endoribonuclease Dicer;
Region: DEXHc_dicer; cd18034"
/db_xref="CDD:350792"
misc_feature order(562..573,580..582,631..654,766..768,952..954,
1057..1059)
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350792"
misc_feature order(730..735,802..807,877..879,883..888,895..897,
970..972,979..984)
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="nucleic acid binding site [nucleotide binding];
other site"
/db_xref="CDD:350792"
misc_feature 1594..1998
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="C-terminal helicase domain of the endoribonuclease
Dicer; Region: SF2_C_dicer; cd18802"
/db_xref="CDD:350189"
misc_feature order(1684..1692,1867..1869,1924..1926,1930..1932)
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:350189"
misc_feature order(1879..1881,1885..1887,1960..1962,1966..1968)
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350189"
misc_feature 2164..2433
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="Dicer dimerization domain; Region: Dicer_dimer;
pfam03368"
/db_xref="CDD:427264"
misc_feature 3007..3438
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="This domain is named PAZ after the proteins Piwi
Argonaut and Zwille; Region: PAZ; smart00949"
/db_xref="CDD:198017"
misc_feature order(3106..3108,3175..3177,3187..3189,3241..3243,
3325..3327,3331..3333)
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="nucleic acid-binding interface [nucleotide
binding]; other site"
/db_xref="CDD:239207"
misc_feature 3508..3981
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="Ribonuclease III C terminal domain. This group
consists of eukaryotic, bacterial and archeal ribonuclease
III (RNAse III) proteins. RNAse III is a double stranded
RNA-specific endonuclease. Prokaryotic RNAse III is
important in post-transcriptional...; Region: RIBOc;
cd00593"
/db_xref="CDD:238333"
misc_feature order(3553..3558,3565..3570,3577..3579,3586..3591,
3598..3603,3607..3615,3643..3645,3937..3939,3964..3966)
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature order(3553..3555,3562..3564,3574..3576,3907..3909,
3916..3918)
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="active site"
/db_xref="CDD:238333"
misc_feature order(3562..3564,3907..3909,3916..3918)
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238333"
misc_feature 4051..4791
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="dsRNA-specific ribonuclease [Transcription];
Region: Rnc; COG0571"
/db_xref="CDD:223644"
misc_feature 5077..5289
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="double-stranded RNA binding motif of plant
Dicer-like proteins; Region: DSRM_DCL_plant; cd19869"
/db_xref="CDD:380698"
misc_feature order(5077..5082,5089..5094,5107..5112,5140..5154,
5158..5160,5230..5241,5248..5253)
/gene="DCL4"
/locus_tag="AT5G20320"
/gene_synonym="ATDCL4; dicer-like 4; DICER-LIKE 4;
F5O24.210; F5O24_210"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:380698"
ORIGIN
aaaaattttcagaatcaatgattgtagaaacacatgatttctggttcagaatttcacacactccacccaaaaaaatacccttaaaaagttataattgtattgattagctgataaaatcaatttattggaaagaaatcctaataataacgctgtaatagaagagaagagaagagagagggagacgtgagatcgtgaattatgcgtgacgaagttgacttgagcttgaccattccctcgaagcttttggggaagcgagacagagaacaaaaaaattgtgaagaagaaaaaaacaaaaacaaaaaagctaaaaagcagcaaaaggacccaattcttcttcacactagtgctgccactcacaagtttcttcctcctcctttgaccatgccgtacagtgaaatcggcgacgatcttcgctcactcgactttgaccacgccgatgtttcttccgaccttcacctcacttcttcttcctctgtttcttcgttttcctcttcttcgtcttctttgttctccgcggctggtacggatgatccttcaccgaaaatggagaaagaccctagaaaaatcgccaggaggtatcaggtggagctgtgtaagaaagcaacggaggagaacgttattgtatatttgggtacaggttgtgggaagactcacattgcagtgatgcttatatatgagcttggtcatttggttcttagtcccaagaaaagtgtttgtatttttcttgctcccaccgtggctttggtcgaacagcaagccaaggtcatagcggactctgtcaacttcaaagttgcaatacattgtggaggcaagaggattgtgaagagccactcggagtgggagagagagattgcagcgaatgaggttcttgttatgactccacaaatacttctgcataacttacagcactgtttcatcaagatggagtgtatctcccttctaatatttgatgagtgtcaccatgctcaacaacaaagcaaccatccttatgcagaaatcatgaaggttttctataaatcggaaagtttacaacggcctcgaatatttggaatgactgcatctccagttgttggcaaagggtcttttcaatcagagaatttatcgaaaagcattaatagccttgaaaatttgctcaatgccaaggtttattcagtggaaagcaatgtccagctggatggttttgtttcatctcctttagtcaaagtatattattatcggtcagctttaagtgatgcatctcaatcgaccatcagatatgaaaacatgctggaggacatcaaacagcggtgcttggcatcacttaagctgctgattgatactcatcaaacacaaaccctcctaagtatgaaaaggcttctcaaaagatctcatgataatctcatatatactctgctgaatcttggcctctggggagcaatacaggctgctaaaatccaattgaatagtgaccataatgtacaagacgagcctgtgggaaagaatcctaagtcaaagatatgtgatacatatctttctatggctgctgaggccctctcttctggtgttgctaaagatgagaatgcatctgacctcctcagcttagcggcgttgaaggaaccattattctctagaaagctagttcaattgattaagatcctttcggtattcaggctagagccacacatgaaatgtataatatttgtcaatcggattgtgactgcaagaacattgtcatgcatactaaataacttggaactgctacggtcttggaagtctgatttccttgttggacttagttctggactgaagagcatgtcaagaaggagtatggaaacaatacttaaacggttccaatctaaagagctcaatttactggttgccactaaagttggtgaagaaggccttgatattcagacatgctgtcttgtgatccgttatgatttaccagagactgttaccagcttcatacagtccagaggtcgtgctcgaatgcctcagtctgaatatgcgtttctagtggacagcggaaacgagaaagagatggatcttattgaaaattttaaagtaaatgaagatcgaatgaatctagaaattacttacagaagctcagaggaaacttgtcctagacttgatgaggagttatacaaagttcatgagacaggagcttgtatcagtggtggaagcagcatctcccttctctataaatattgttctaggcttccacatgatgaattttttcagcccaagccagagtttcaattcaagcctgttgacgaatttggtggaactatctgtcgcataactttacctgctaatgctcctataagtgaaatcgaaagttcactactaccttcgacagaagctgctaaaaaggatgcttgtctaaaggctgtgcatgagttgcacaacttgggtgtacttaacgattttctgttgccagattccaaggatgaaattgaggacgaattgtcagatgatgaatttgattttgataacatcaaaggtgaaggctgttcacgaggtgacctgtatgagatgcgtgtaccagtcttgtttaaacaaaagtgggatccatctacaagttgtgtcaatcttcattcttactatataatgtttgtgcctcatcccgctgataggatctacaaaaagtttggtttcttcatgaagtcacctcttcccgttgaggctgagactatggatatcgatcttcaccttgctcatcaaagatctgtaagtgtaaagatttttccatcaggggtcacagaattcgacaacgatgagataagactagctgagcttttccaggagattgccctgaaggttctttttgaacggggggagctgatcccggactttgttcccttggaactgcaagactcttctagaacaagcaaatccaccttctaccttcttcttccactctgtctgcatgatggagaaagtgttatatctgtagattgggtgactatcagaaactgcttgtcatcaccaatctttaagactccatctgttttagtggaagatatatttcctccttcgggctctcatttaaagctagcaaatggctgctggaatattgatgatgtgaagaacagcttggtttttacaacctacagtaaacaattttactttgttgctgatatctgccatggaagaaatggtttcagtcctgttaaggaatctagcaccaaaagccatgtggagagcatatataagttgtatggcgtggaactcaagcatcctgcacagccactcttgcgtgtgaaaccactttgtcatgttcggaacttgcttcacaaccgaatgcagacgaatttggaaccacaagaacttgacgaatacttcatagagattcctcccgaactttctcacttaaagataaaaggattatctaaagacatcggaagctcgttatccttgttaccatcaatcatgcatcgtatggagaatttactcgtggctattgaactgaaacatgtgctgtctgcttcgatccctgagatagctgaagtttctggtcacagggtactcgaggcgctcacaacagagaaatgtcatgagcgcctttctcttgaaaggcttgaggtgcttggtgatgcattcctcaagtttgctgttagccgacacctttttctacaccatgatagtcttgatgaaggagagttgactcggagacgctctaacgttgttaacaattccaacttgtgcaggcttgcaataaaaaaaaatctgcaggtctacatccgtgatcaagcattggatcctactcagttctttgcatttggccatccatgcagagtaacctgtgacgaggtagccagtaaagaggttcattccttgaatagggatcttgggatcttggagtcaaatactggtgaaatcagatgtagcaaaggccatcattggttgtacaagaaaacaattgctgatgtggttgaggctcttgtgggagctttcttagttgacagtggcttcaaaggtgctgtgaaatttctgaagtggattggtgtaaatgttgattttgaatccttgcaagtacaagatgcttgtattgcaagcaggcgctacttgcccctcactactcgcaataatttggagacccttgaaaaccagcttgactataagttcctccacaaaggtctacttgtacaagcctttatccatccatcttacaacaggcatggaggaggctgctaccagagattggagtttcttggggatgctgttctggactacttgatgacatcctattttttcacagtcttcccgaaactgaaacctggtcaactgaccgatctaagatctctctcagtaaataatgaggcgctagcaaatgttgctgtcagtttttcgctaaagagatttctattttgcgagtccatttatcttcatgaagttatagaggattataccaatttcctggcatcttccccattggcaagtggacaatctgaaggtccaagatgcccaaaggttcttggtgacttggtagaatcctgtttgggggctcttttcctcgattgtgggttcaacttgaatcatgtctggactatgatgctatcatttctagatccggtcaaaaacttgtctaaccttcagattagtcctataaaagaactgattgaactttgccagtcttacaagtgggatcgggaaatatcagcgacgaaaaaggatggtgcttttactgttgaactaaaagtgaccaagaatggttgttgccttacagtttctgcaactggtcggaacaaaagagagggcacaaaaaaggctgcacagctgatgattacaaacctgaaggctcatgagaacataacaacctcccatccgttggaggatgttctgaagaatggcatccgaaatgaagctaaattaattggctacaatgaagatcctatagatgttgtggatcttgttgggctggacgttgaaaacctaaatatcctagaaacttttggcgggaatagtgaaagaagcagctcatacgtcatcagacgaggtctcccccaagcaccatctaaaacagaagacaggcttcctcaaaaggccatcataaaagcaggtggaccaagcagcaaaaccgcaaaatccctcttgcacgaaacatgtgttgctaactgttggaagccaccacacttcgaatgttgtgaagaggaaggaccaggccacctgaaatcattcgtctacaaggtaatcctggaagttgaagatgcgcccaatatgacattggaatgttatggtgaggctagagcaacgaagaaaggtgcagcagagcacgctgcccaagctgctatatggtgcctcaagcattctggattcctttgctgatgatctcgagcggctatatatcggttagaaatagatgttatcataggcatatataacttttaccagagctacatattagcatatatgatcgacacctacaatttctcgaaagagaaaaaaggatgtctgaaaactaaccttaaaccatagattttggagcggagagctttcggcaaaagttctcttcgattgctcttctgaatttctgaatataagtatatgtttacttgtacttgatgaacccatagcatgataggctccaaaaatatagtttactcatctctcatgcatcaaatatgttcctgtgtgatcttaattaaacaatatatgaactaagcgttaactggtcttacattttc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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