LOCUS       NM_101329               1182 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana decoy (DECOY), mRNA.
ACCESSION   NM_101329
VERSION     NM_101329.4
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 1182)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1182)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1182)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (bases 1 to 1182)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003070).
            
            On Sep 12, 2016 this sequence version replaced NM_101329.3.
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     gene            1..1182
                     /gene="DECOY"
                     /locus_tag="AT1G14620"
                     /gene_synonym="T5E21.12; T5E21_12"
                     /db_xref="Araport:AT1G14620"
                     /db_xref="GeneID:838024"
                     /db_xref="TAIR:AT1G14620"
     CDS             208..909
                     /gene="DECOY"
                     /locus_tag="AT1G14620"
                     /gene_synonym="T5E21.12; T5E21_12"
                     /inference="Similar to RNA sequence,
                     EST:INSD:DR360408.1,INSD:AV824260.1,INSD:EG446080.1,
                     INSD:EG421473.1,INSD:EG495164.1,INSD:EG436242.1,
                     INSD:EH877347.1,INSD:EL095632.1,INSD:DR365267.1,
                     INSD:BP671916.1,INSD:ES154120.1,INSD:ES165016.1,
                     INSD:ES160909.1,INSD:BP622396.1,INSD:EL322504.1,
                     INSD:EG445877.1,INSD:ES164817.1,INSD:EG495162.1,
                     INSD:EG421467.1,INSD:EG446085.1,INSD:EG446084.1,
                     INSD:EL047295.1,INSD:ES113727.1,INSD:EH928773.1,
                     INSD:ES194560.1,INSD:EG445080.1,INSD:EG446081.1,
                     INSD:DR365268.1,INSD:EG445878.1,INSD:BP841827.1,
                     INSD:EG420782.1,INSD:BP861261.1,INSD:AV785476.1,
                     INSD:EL114949.1,INSD:AI998270.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT015444.1,INSD:BT001031.1,INSD:U87586.1,
                     INSD:AY127001.1"
                     /note="DECOY (DECOY); CONTAINS InterPro DOMAIN/s:
                     Ribosomal protein L46 (InterPro:IPR021757); Has 274 Blast
                     hits to 274 proteins in 142 species: Archae - 0; Bacteria
                     - 2; Metazoa - 83; Fungi - 120; Plants - 46; Viruses - 0;
                     Other Eukaryotes - 23 (source: NCBI BLink)."
                     /codon_start=1
                     /product="decoy"
                     /protein_id="NP_172914.1"
                     /db_xref="Araport:AT1G14620"
                     /db_xref="GeneID:838024"
                     /db_xref="TAIR:AT1G14620"
                     /translation="

MPRSSLRLLAKPLLESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIAKNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPEKVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDLPSYKRFFFKCSVVAASKYDISNCEDFVWVTKDELLEFFPEQAEFFNKMIIS"

     misc_feature    499..873
                     /gene="DECOY"
                     /locus_tag="AT1G14620"
                     /gene_synonym="T5E21.12; T5E21_12"
                     /note="Nudix hydrolase is a superfamily of enzymes found
                     in all three kingdoms of life, and it catalyzes the
                     hydrolysis of NUcleoside DIphosphates linked to other
                     moieties, X. Enzymes belonging to this superfamily require
                     a divalent cation, such as Mg2+ or Mn2+...; Region:
                     Nudix_Hydrolase; cl00447"
                     /db_xref="CDD:444909"
     misc_feature    order(607..615,628..654)
                     /gene="DECOY"
                     /locus_tag="AT1G14620"
                     /gene_synonym="T5E21.12; T5E21_12"
                     /note="nudix motif; other site"
                     /db_xref="CDD:239217"
ORIGIN      

agcaaaccggattctggtttggttatgtaatccaattttaattagatcaaaccggattctggttatgtaaaccaataatttttcgattccgtcgaaattgttttacctgaaaggggatttggaaaaaccctctcactctcaggctcaagcgccggcgttcactctctaaccaaactcgatttcgtttctgggttgtgagattgagaaatgccgagatcatctttgcggctactagctaagcctctcttggagagcaggcgagggttttgcacgagctctgataagatcgtagcttcggtgcttttcgagagattgcgcgttgtgatacccaaaccggatcctgccgtttacgctttccaggagttcaaattcaattggcaacagcagtttcgtcgtagatatcccgatgagttcttagacattgctaagaacagagccaagggtgaataccaaatggactatgtacctgctcctagaattacagaggctgacaagaataacgataggaagtcattatatagagccctagacaaaaagttgtatcttctcatattcggcaagccatttggagctactagtgacaaacctgtttggcacttcccagagaaagtctatgattctgagccaactcttcgcaagtgcgcggaatctgctttgaagtcagtcgtaggagacctcactcacacatactttgttggaaatgctccaatggctcacatggccatacaacctacagaagaaatgcctgatttgccatcttacaagaggttcttcttcaaatgcagtgtagtagcagcatcgaaatacgacataagcaactgcgaggattttgtgtgggtaaccaaagacgagctcttggaattcttccctgagcaagctgaattcttcaacaagatgatcattagctgagccactcacaccacaaaaactcctattttcatcccttcttctccatcaatgtcatctctctggtattagacagtgtgagaaggtcaatgtaataaccaaacaaaaccatgtctctggttgtgacgtgaaggaaatttttgttgacagttgatctgaagtacgtagttgaatgtagttgtggcttctttctcaacctttttttatacatctctccgatagatattatattacgtatcttgataagaaatcacacactcgttgattcgagaacag

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