LOCUS       NM_001335111            1064 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana yacP-like NYN domain protein (AT2G02410),
            mRNA.
ACCESSION   NM_001335111
VERSION     NM_001335111.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 1064)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1064)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1064)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003071).
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     gene            1..1064
                     /locus_tag="AT2G02410"
                     /gene_synonym="AT2G02420; T16F16.20; T16F16_20"
                     /db_xref="Araport:AT2G02410"
                     /db_xref="GeneID:814772"
                     /db_xref="TAIR:AT2G02410"
     CDS             110..778
                     /locus_tag="AT2G02410"
                     /gene_synonym="AT2G02420; T16F16.20; T16F16_20"
                     /codon_start=1
                     /product="yacP-like NYN domain protein"
                     /protein_id="NP_001323999.1"
                     /db_xref="Araport:AT2G02410"
                     /db_xref="GeneID:814772"
                     /db_xref="TAIR:AT2G02410"
                     /translation="

MAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEVVALREDGCPKVWVVTSDVCQQQAAHGAGAYIWSSKALVSEIKSMHKEVEKMMQETRSTSFQGRLLKHNLDSEVVDALKDLRDKLSENETKR"

     misc_feature    245..670
                     /locus_tag="AT2G02410"
                     /gene_synonym="AT2G02420; T16F16.20; T16F16_20"
                     /note="PIN_domain of Bacillus subtilis YacP/Rae1 and
                     related proteins; Region: PIN_YacP-like; cd10912"
                     /db_xref="CDD:350236"
     misc_feature    order(287..289,323..325,332..337,344..346,353..358,
                     365..370,443..445,635..637,644..649,653..661,665..670)
                     /locus_tag="AT2G02410"
                     /gene_synonym="AT2G02420; T16F16.20; T16F16_20"
                     /note="homodimer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:350236"
ORIGIN      

actactgtgtctaagtctaaacattattagtgttcaagaatttgtctaagttacaatctttggaattgtatgatatatattgtaggagtttcagagcagaggatctggcatggctaagccagcgactagttacaggaagaagaaagtagagaaagacgagttaccggatgatagcgagctctaccgggatcctacaaatacgctttactacacgaaccaaggtctattggatgacgcagttccggttttgcttgttgatggttataatgtgtgtggatattggatgaagttaaagaaacatttcatgaaaggaaggcttgacgttgctcggcagaagttagttgatgaacttgtgtccttcagtatggttaaagaggttaaggtagtggttgtgtttgatgctctcatgtctggtcttcctactcacaaggaagactttgcaggtgttgatgtgattttctcaggagaaacttgtgctgacgcttggattgaaaaggaggtggttgcattgagagaagatggatgccccaaggtttgggttgtaacatctgatgtctgtcaacaacaagcagcacatggagcgggagcttatatttggagtagcaaggcattggtttctgagattaaatcgatgcataaggaggttgagaaaatgatgcaagaaacaaggtcaacatctttccaagggagattgcttaaacacaatcttgattctgaagtcgttgatgctcttaaagatcttagagacaaattatcagaaaacgaaacaaagagatgacaaaaagaccaatccggattatataaacaattaacaaggcttggtctctccatgtaacttctgtcccaagtaagtaagctaatctgacttgtaaaaaacagaggctgcagaggaaacgagggagatagagagagagagagctcaaatgctttgttattgttgtatttgtgtctgaattctttttgactaatctatatatagattcgttttctttggtccaaacatatggttaaaagatagttctgaatttttcttttagcttcatgcataagaatcatcttaacct

//