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2024-04-20 03:14:32, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_746435               3803 bp    RNA     linear   PRI 12-FEB-2021
DEFINITION  PREDICTED: Saimiri boliviensis boliviensis NRDE-2, necessary for
            RNA interference, domain containing (NRDE2), transcript variant X2,
            misc_RNA.
ACCESSION   XR_746435
VERSION     XR_746435.2
DBLINK      BioProject: PRJNA699579
KEYWORDS    RefSeq.
SOURCE      Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
  ORGANISM  Saimiri boliviensis boliviensis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Platyrrhini; Cebidae; Saimiriinae; Saimiri.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024100921.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Feb 12, 2021 this sequence version replaced XR_746435.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Saimiri boliviensis Annotation
                                           Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3803
                     /organism="Saimiri boliviensis boliviensis"
                     /mol_type="transcribed RNA"
                     /isolate="100643"
                     /sub_species="boliviensis"
                     /db_xref="taxon:39432"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /collection_date="2019-07-23"
                     /breed="Bolivian squirrel monkey"
     gene            1..3803
                     /gene="NRDE2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 mRNAs, 96 ESTs, 6 Proteins, and
                     96% coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:101050171"
     misc_RNA        1..3803
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X2"
                     /db_xref="GeneID:101050171"
ORIGIN      
gctttgccctgccccctgccccgccttgtccccgtgccatgacgcccctcccctctgggccccgcccctcccgcttccgggtcaggccctagaaagcgccgggaaaaccacatttcccagagtgcaccgccacggcggggtcctcggaccggcgcttgctcgcctgcgccatttctgtagagaggaacggcggtgcggcctgtggtcatggcgctgttcccggcctttgcgggggttagtgagacccccgatagtgggagctccaggaaagagttagactggctgagcaacccaagcttttgtgtcggatccataacgtcccggagccaacaaactgaagcagccacagcccatgtttctgaagggtcaccactgtcaaggagtcctctgaaatcagagccttcagatgaaagtgacactaacaaaaagttcaaacaaacaagcagaaaaaagaagaaagagaaaaagaaaagaaggaagcaccagcatcataagaaaacaaagaggaaacatggacagtcgagtagcagcaggtctgagacagacactgattctgaaaaggacaaaccttccagaaccatcggaggcagtaaaaaggaatctgagaaaccgaatcaaggaaataatgctgcagctgatactggacatcgctttgtttggcttgaggacattcaggctgtgacaggagaaaccttcagaacagataagaaaccagatcctgcaaactgggagtacaagtctctctaccgaggggatatagcaagatacaagaggaaaggagactcctgccttggcattaatcctgcgaagcaacgcatatcttgggaagggacttccacagagaagaagcattcacacaagcaggttgaacgctattttactaagaagagtgtggggttaatgaacatcgatggagttgccattagcagtaaaactgaacctccatcatctgaccccgcctcctttataccagtgaaggacttggaagatgcagctcctgttacaacctggttgaatcctctggggatttatgatcagtcaactacacagtggttacaaggacagggtcctccagagcaggaatccaagcagccagacacacagccagacagcgagagtgcggctctcaaggccagggtggaggagttcaacaggagggtgcgggagaatccgcgggatacgcagctgtggatggcatttgttgcttttcaggacgaggtcatgaaaagtcctggcctgtatgccatcgaggaaggagagcaggaaaagcgaaagaggtccctgaagctcattctggagaagaagctggccattctggagcgggccattgagagcaaccagagcagtgtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccactctggtcaaagagtggcagaaactgatatttttacatcccaataatacggtcctttggcagaaataccttttgttttgccagagccagtttagtaccttttcaatatcaaaaattcacagtctttatggaaaatgcttgagcaccttgtctgctgtgaaggatggcagcatcttatctcaccctgcgttgcctggcacagaagaggccatgtttgccctctttcttcagcactgccactttctgcggcaggccggccactctgagaaggccatctcattgttccaggccatggtggacttcacattcttcaaacccgacagcctgaaagatatgcctaccaaaggacaggtagaattctttgagcccttttgggacagtggagagccccgggctggggagaagggagcccgaggctggaaggcgtggatgcaccagcaggagcgaggtggctgggtggtcatcaacccagacgaggatgacgatgaaccagaagaggacgatcaggaaataaaagataagactcttcccaggtggcagatctggcttgctgctgagcgttcccgagaccagaggcactggcggccctggcgccctgataagaccaagaagcaaaccgaggaagactgtgaggatcctgagagacaggtgttgtttgatgatattgggcagtctttgatcagactttcaagccaagatctgcagttccagctggtggaggcctttctgcagttcttgggtgtgccttctggcttcactcttccagcctcctgtctctatctggccatggatgagaacagcatctttgacaatggactttatgatgaaaagcccttgacttttttcaaccctttgttttccggggccagcagtgtgggccgcatggaccggctgggctgtcctcgctggaccaggggtcagaaccgagagggtgaggagttcatccgcaacgtcttccacctggtcatgcctttgttttcaggcaaagagaagtctcagctctgcttctcctggttacagtatgagattggaaaggtcatgtggtgtctgcacactaaaaacaagaagagattaaagtcacaagggaagaactgcaaaaaactcgccaagaatctccttaaggagccagaaaaccgcaacagcttttgcctctggaagcagtatgcccatctggagtggttgcttggcaacacagaggatgctaggaaagtttttgacacagcactcggcacggcaggaagccaaggactgaaggactctgaactctgtgagctcagtctgctctatgccgagctggaggtggagctgttgccggaagtgagaggggccgcctccgctcgagctgttcacatattaaccaagctgaccgagagcagcccctacgggccctatactggagaggtgttggctgttcacattttgaaagcacgaaaggcttacgagcacgcgctgcaggactgtttgggtgacagctgtgtctccgatccagctcccaccgattcctgtacccgcctaattagcttggccaaatgcttcatgctcttccagtatttgaccatcgggattggtgctgctgtacggatatacgaacaggtatttgccaaactgcacggttctgttttcccagaaggctctggcgaggggaacagtgccagctcccagagttggagcagtgttctcgaagccatcacactgatgcatgcaagcctgctgagattccacatgaaagtgagtgtttacccgctggcccctctgcgagaggcactctcacaggctttaaagctgtatccaggcaaccaggttctttggaggtcctatgtccagattcagaataagtcccacagcgccagcaagaccaggagattttttgacacaatcaccaggtctgctaaactcttggaaccttggctgtttgcaattgaagctgagaaaatgaggaaaagactagtggaaactgttcagaggttagacggtcgagagatccacgccacgattcctgagaccggcttaacacatcggatccaagccctgtttgaaaacgccatgcgcagcgacggtggcagccagtgccccttgctgtggaggatgtatttgaactttttggtttccttaggaaataaagaaagaagcaaaggtgtattctacaaagcacttcagaattgtccttgggcaaaggtgttgtacctggacgctgtggagtacttccccgaggagatgcaggaggtcctggatctgatgaccgagaaggagctccgggtgcgcctgccactggaggagctggagctgctgctggaggattagagagccgcggggaacggaccgtaactgtgaggccaagtcgcccaccctgcagagccaggaggcacgaggggagaatgtaccgagtctgctgtgtcacccag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]