2024-03-28 20:25:26, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_332023 3648 bp RNA linear VRT 04-JUN-2018 DEFINITION PREDICTED: Pelodiscus sinensis NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X3, misc_RNA. ACCESSION XR_332023 VERSION XR_332023.3 DBLINK BioProject: PRJNA221645 KEYWORDS RefSeq. SOURCE Pelodiscus sinensis (Chinese soft-shelled turtle) ORGANISM Pelodiscus sinensis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005854923.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 4, 2018 this sequence version replaced XR_332023.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pelodiscus sinensis Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3648 /organism="Pelodiscus sinensis" /mol_type="transcribed RNA" /isolate="Daiwa-1" /db_xref="taxon:13735" /chromosome="Unknown" /sex="female" /country="Japan: Saga" gene 1..3648 /gene="NRDE2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns" /db_xref="GeneID:102461156" misc_RNA 1..3648 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X3" /db_xref="GeneID:102461156" ORIGIN
tgctcgcgcgagccgcgccatcttgcctggctgggcgccggggcctccttgagaagcaagagggacggaagcggtggttcggcctatggctcttttcccagcctttgccggcgccgccgagcccggggagacgcccgctagcggtagcgagggctccaggagagaattgaactggcttagcaatccgagcttctgcacagaagatgcactaaaactgcaccagcatactacaaagactgtagatcttactgctgagagatcagaacttacaagcaggagtccttcaagagcagagctttcaggaggaagtgataccgatgaaggtctaaaaaaatcaattaagaaaagtaaatggaaaaagaaaaagcatcaccaccacaagaaaagaaaaaagaaaactagagatgaatcaagtaacagtgagtcagacttggatactgagtgtgtgaagggtaaacctcgaggaagtaacacaaaccctgaaagagaagtagcagcattaaatctagaagatataacatcaaatgttgccaccaatcgctttgtttggcttgaggatattcaggctttgacagcagaaaccttcagaacagacaagaaaccagaccctgcaaactgggaatacaagtcactatatcgtggcgacatagcaagatacaagaggaagggtgacttctgccttggtattgacctaaagaaacaacgtataacttgggaaggtcccatggtagaaaagaaacagtcccacaagcgacctgaacgctacttcacaaaaaacagtgtgcagttactgcgtgcaggtggaattccagtttacagtaaaagccaaacttattcatctgacccaagcacctttatattagtttcacaagtggacagcgatgctcctcctgcaacaaccagggtgaatcctctggggatttatgatccattgactactctgtggttgcaaggaaaaggtcccccagagtatgagacttcaaagcaacaggcatcccaagaaaccagtgaaaatgttaactcttttctaatggcaaaagtggaagactataataagagggtcagagaaaacccaagagatgtccacacttggatggaatttgtttcttttcaggatgaactaatgagaggacccagcctttatgccttcaaggagggagagcaggaaataaggagaaaatcattcaagctaatactagaaaagaaactgtcaattttagagagagctattgaaagcaacccaaatgaggttgatctgaagcttgccaagctgaacctttgtacagaattctgggaaccatcaactttgatcaaagaatggcagaaactggtttttttgcatcccaataatccagttttatggcagaaatatctcttattttgtcaaagtcagttcagtaccttttcagtttcaaaagtcaatagtttatatggaaaatgtttgagcactttggcagctatagaggacggcagtatggtatcacatcctgtactacctggcacagaagaagctatgttagctatctttcttcagcagtgccattttcttagacagacgggccattctgagaaagctgtgtctttgttccaagccctggttgatttcaccttctttaaacctgacaatgtaaaagatctgccaacaagaggacaggtggagttctttgaaccattttgggacagtggagagcctcggtttggagaaaaaggagcaaaaggctggaaatcatggatgcatcaacaagaaaagggaggctggattgttatcaataaacctgatgaagatgaggaagatgtagatgaagatccagaaataaaggataaaactctacccaaatggcaaatttggcttgacgttgaatgttcccgtgaaacaaggcattggatgccttggcgacctgacaaaactaaaaaacagagtgaagaagattgtgaagacccagagagacaggtattatttgatgatcttgggccatctttaatcagactttctagtccagatcttcagtttcagctgctatattcatttctacaatttttgggagtcccatgtgagcgtaatctctttccttcaaatctctatatcgctatggatgagaatagcatctttgatgctgggcattctgaagggccactgacttcttttgactcactgctttctggagtcaatagtattggccatatggatacaatgatcagagagagacagcgcataggacactgtaaggaaggagaggagttcctacagaatgtctttcatttcatactgccaatgttttcaggaaaggaaaagtcaaacctgtctgtctgttggctacaatatgaaatctcaaaggttgttcagtgtctccaagtgaaaaacaagaagaaactgaagtcacaggggaagaagagcaaaaaactagccaagaatctccttaaggaatctgaaaaccgaaacagcctttccctctggaaactgtatgcttacttggagtggttacttggcaacacagaagattctagaaaagtgtttgatacagctctttgtttggcgggaactgacgggatgagaagtacccaactctgtaatctgagcttgttttatgcttcactggaagtggagctgttagagagtctggaggaaactgttatgtcacgtgctgtacatatattgaccaaagtgactgaaagtggaccatatgtgccttatactgggcaggtgttatctgtgaatatcttgaaagctcggaaagcatatgagcatgcattgaaagattatttaaatgaaagccctgtcactaactgggatcaggccagtggttctagccaaatggttagtttagttggttgttatgcgcttttccagtatttgactgttgggattgatgctgctgtattcatatatagaaatatttctgaaaagcttaaagattttgcttcacagaagtttgaaagtattggagaaaatcttggcgttcagaattttcccactgcccttgaagctgtcacactcatgcacacaaatttactcaggtaccatatgaaagttagcatttatcctttaaatccactgcgagaggcactaatggaagctttgaagctgtatcctagcaaccagtctctttggagatcatatatccagatccaaagcaagtctcacaacgctagcaaagcacgaagattttttgatagcgtcgcaaggtctaccaagttcctagagccatggctgtttgcaatccaagccgagatgatgagaaagaagcttgttgagagtgtccaaagatgttggagaaatatattcaacaattcctgaaaccggattaacgaatcggatcaaagctttatttgaacatgcaattcagagtgaaaatggtgcccattgtccgttgctgtggagaatgtatttgaattttctgttttctctcggaaataaagaaaggagcaaaggactattttacaaagctcttcagaactgtccctgggcaaaggtgctgtatatggatgcaatagaatattttccagatcagctgcaagagatcctagatctaatgactgaaaaagaattgagaataagagtacctatagaagaactggaactgctactggaagattaaaagaagatggtgcaagaacaaaaaccaaaacaatacacaaagataagataag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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