ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2026-09-16 21:33:12, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_012446044 2211 bp RNA linear ROD 19-MAY-2025 DEFINITION PREDICTED: Castor canadensis dicer 1, ribonuclease III (Dicer1), transcript variant X6, misc_RNA. ACCESSION XR_012446044 VERSION XR_012446044.1 DBLINK BioProject: PRJNA1254772 KEYWORDS RefSeq. SOURCE Castor canadensis (American beaver) ORGANISM Castor canadensis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133388) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_047511655.1-RS_2025_05 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 05/09/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2211 /organism="Castor canadensis" /mol_type="transcribed RNA" /db_xref="taxon:51338" /chromosome="3" gene 1..2211 /gene="Dicer1" /note="dicer 1, ribonuclease III; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns" /db_xref="GeneID:109698296" misc_RNA 1..2211 /gene="Dicer1" /product="dicer 1, ribonuclease III, transcript variant X6" /db_xref="GeneID:109698296" ORIGIN
cgccggcgggaggggtcgggaggcgcagcgcggcgcggcgcaggctgctccgaggcccaggtgaatggagtaacctgacagcgggaacgaggcgacggcgagcggcaggaaatggcggcggcggcggcggcgccgggtggcaccgggaggcctgggctgtgacgcgcgcgccggagcggggtccgatggttctggaaggcccgcggcgccccgtgctgcaggttacctagggtatgaattaatacagacttggaaactctgaaagaacttagaatcagcattttgagagcagaagcttgggcatgctgtgattttccaataaactgctatcacaatgtcaaaatgcagttcagacaacagcaacacagagatctcaaacattaaaacgtaagctgtgctagaacaaaaatgcaatgaaagaaacactggatgaatgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgcttcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataacatttatacgccaagaaaatatcaggtcgaactgcttgaagcagctctggatcataataccatcgtctgtttaaacactggctcagggaagacattcattgcagtactactcactaaagagctgtcctatcagatcaggggagacttcagccgaaatggaaaaaggaccgtgtttttggtcaactctgcaaaccaggttgctcaacaagtgtcagctgtaagaactcattctgatctcaaggttggggaatattcaaatccagaagtaaatgcatcttggacgaaagagagatggaaccaagagtttactaagcaccaggttctcattatgacttgctatgtcgccttgaatgttttgaaaaatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgcaattctagaccacccctacagagaaattatgaagctctgtgaaaattgtccatcatgtcctcgcattttgggactaactgcatccattttaaatgggaaatgtgatccagaggaattggaagaaaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgacctggtggtcttagacagatacacttctcagccatgtgagattgtggtagattgtggaccatttactgatagaagtgggctttatgaaagactgctcaaggagttagaagaagcacttgattttatcaatgactgtaatatatctgtacattcaaaagaaagagattctactttaatttctaaacagatattatcagactgtcgtgcagtactggtagttttgggaccctggtgtgcagataaagtagctggaatgatggtaagagaacttcagaagtatatcaagcatgaacaagaggagctgcacaggaagtttttattgtttacagacactttcctaaggaaaatacatgcactatgtgaagagcacttctcacctgcctcacttgacttgaaattcgtcactcctaaagtaataaaactgcttgaaatcttgcgcaaatataaaccatatgagcgacagcagtttgaaagtgttgaatggtataataataggaatcaggataattatgtttcttggagtgattctgaggatgatgatgaggatgaagaagttgaagaaaaagaaaagccagagacaaatttcccttctccatttaccaacattttatgtggaattatttttgtggaaagaagatacacagcagttgtcctcaacagattgataaaggaagctggcaaacaagacccagagctggcttacatcagcagcaacttcataactggacatggcattgggaagaatcagcctcgtaacaaacagatggaagctgagttcaggaagcaggaagagagtaccgatcctatgttcagtctaaaggaagagcaagggcaccaatctctaattacataatgttagcagacacagacaaaatgaaaagttttgaagaagatcttaaaacctacaaagctatcgagaagattttaagaaacaaatgttccaagtcagttgatactggtgagtctgacattgatgctgttgtggatgatgatgatgttttcccaccatatgtactgcggcctgatgatgggggtccacgagtcaccatcaacactgccatt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]