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2025-08-29 09:12:12, GGRNA.v2 : RefSeq release 231 (Jul, 2025)

LOCUS       XR_012379129            4662 bp    RNA     linear   MAM 09-MAY-2025
DEFINITION  PREDICTED: Callorhinus ursinus NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X4,
            misc_RNA.
ACCESSION   XR_012379129
VERSION     XR_012379129.1
DBLINK      BioProject: PRJNA481736
KEYWORDS    RefSeq.
SOURCE      Callorhinus ursinus (northern fur seal)
  ORGANISM  Callorhinus ursinus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia;
            Pinnipedia; Otariidae; Callorhinus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_027397070) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_003265705.2-RS_2025_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/07/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4662
                     /organism="Callorhinus ursinus"
                     /mol_type="transcribed RNA"
                     /isolate="GAN/ISIS: 27379988/994484"
                     /db_xref="taxon:34884"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="adult"
     gene            1..4662
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:112822101"
     misc_RNA        1..4662
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:112822101"
ORIGIN      
agagcgaaggcctcactaccggcgtccgctcaccggcgccatttctgtcgaagggaacggcagtgcggcctgtgatcatggcgctgttcccggcctttgcgggcattggtgacgctcccaatagcggcagcgccaggaaagaattagattggctgagcaacccgagcttttgcgttggagccataacctctctgagccaacaacctgaagaggctgctgctctggtttctgaagggtcaccgctgacgaggagtcctctgaaatcagagccttcggatgaaagtgatgctaacagaaagcccaaacaaacaagcagaaaaaagaagaaagagaaaaagaagaagaggaaacatcaccacaagaaaaccaagagaaaacgtgggcaggccagtagcagtggctccgagccagatagtgagcctgaagaggacaaaacttccagaagcactggagacagtagaaaggaatcagagaaaccaagtcaagaaggtaatgctgccgctgatattgggcatcgctttgtttggcttgaggacgttcaggctctgactggagaaaccttcagaacagataagaaaccggatccggccaactgggagtataagtctctctaccgaggagacatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgtatatcctgggagggggctgccgcaggaaagaagccttcacacaagcatgttgagcgctattttacgaagaagagcgtgggcttaatgaacgttgatggagttgctgttggcagtaaaactgaacctccctcgtctgagccaatctcctttatccccgtgaagggcttggatgatgtgattcctcccgttatgacctggttgaaccctctggggatttacgatcagtccaccacgcagtggttacaagggcagggtcctccagagcaagaatcaaagcagccagactcccagacagacagagagcgtgcgctgctcaaggccaaggtggaggagttcaacaggagagtgcgggagaaccctcacgatattcagctgtggatggcgttcgttgcttttcaggacgaggtcgtgcggagccctggcctgtatgtcctggaggagggggagcaggagaagcggaagaggtctgtgaagctggtgctggagaagcagctggccatcctggagcgggccattgagagcaaccagagctccgtggagctgaagctggcccggctgaagctgtgcgcggagttctgggagccctcggcactgctcaaggagtggcagaaactgatatttgtacaccccaacagtacggccctctggcagaagtaccttttattttgccaaagccagttcagcaccttcaccgtgtccaagatccacggtctttacggcaaatgcttgagcactctgtccgcggtgcaggacggcagcatcctgtcgcaccccgccctgcccggcaccgaggaggccgtgttcgctctctttcttcagcactgtcacttcctgcggcaggccggtcactctgagaaggcgatctcgctcttccaggccatggtggacttcaccttcttcaagccagacagcgtgaaagacctgcctaccaaaggacaggtggaattctttgagcccttctgggacagcggggagccccgggctggggagaagggtgctcgaggctggagagcctggatgcaccagcaggagcgaggcggctgggtggtcatcagtccagatgatgatgatgacgaaccagaagacgaggacgaggaaataagagataagagtctgcccaggtggcagatctggctcgccgccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaagaagcaaaccgaggaagactgtgaggacccagagagacaggtgctgttcgatgacattgctcagtctctgatccagctctccagccaggatcttcagtttcagctggttgcggcctttctgcagttcctgggcgtgccttctggcctcagccccccagcctcctgcctctacctggccatggatgaggacagcatcttcgataatgggcttcatgatgaaaagccactgacttttctcaacctgtccctttccggcgtcagctgtgttggccgctcagacccactgggctgccgccgctggacccgcgggcacaatcgagagggcgaggagttcatccgcaacatctttcaccttgtgatgcctctgttttcaggccaggagaggtctcagctctgcttctcctggctacagtacgagatggcaaaggtcatttggtgtctgcacactaaaaacaagaagaggttaaagtcgcaaggaaagaactgcaaaaaactcgccaaaaacctccttaaggagccagaaaaccgcaacagtttttgcctctggaagcagtacgcacatgtggagtggttgctcggcaacaccgaggacgccaggaaggtgttcgacggggcgctcagcctggcggggagcggagaaccgcgggggtgcgagctctgggagctcggccgcctctacgcggggctggagctggagctggagctggagctctcgccggccgcgagaggggccgccacggcccgagccgtccacatactgaccagactgacggagaatggtccctacgcaccctactccgggccggtcttggccgttcacgttctgaaggcccggaaggcttacgaacacgcgctgcaggactgttgggggcagagctgtggctccggtccggctcccgccgacgcctctcaccgcctcaccggcccgctccagtgcttcatgctcttccagtatttgaccgtggggatcgatgccgcggtgcggctctacgagcaggcgtgtgcgaagctgcggggctcggtctccccgggcggctgtggcccggacgagcccggctgcgcgcagagcccgggccgcggtctcgaggccgtcacgctgacgcacacgagcctgctccgcttccacgcgagagtcagcgtttgccccgtggctcctctgcggcaggcgctctcggacgccttacggtggtacccgggcaaccaggttctgtggagggcctacgtacagattcagagtcggtcccacgcggccagtaagaccagaagattcttcgatgccatcaccaggtctgccaaacccttggagccgtggctatttgcgattgaagccgagaagatgaggaagaggctggtggaaagcgttcagagggtaggtggcagagaggtccacgccacaattcctgagaccggcttgacgcatcggatcaaagccctgtttgaaaatgctttgcggagtgacagcggcagccagtgccccttactgtggagaatgtatttgaactttctggtctccttgggaaacaaagaaaggagcaaaggcgtgttctacaaagcacttcagaattgtccttgggcaaaggcgctgtacctggatgccgtggggcacttccctgaggagatgcaggaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcccatggaggagttggagcttctgctcgaggactagagaccaggaggtgttcaacaggccctgccttccaggcctcgctgcctgccccgccggggccaggctgcaaaggacggggcacgcgacgaaattgctttctcttctctgaggcccggctctcaaacaaaaccgcgacgcctctaactgccgacgttgtcgttctttggcacctcatccagaaaagccagtgtcgtggaacagaattttggcgcacaacagctggaaaaggaggctggcgagtcagagcccccgaggaaggtggccggccagccagccaagtggacgcttgccgtgtctgcccggctcactccctggctcgcacacggacctgctcagaaaggagaggagtgctggaaacagatgggggaagggaagctctgacgtggttttgaacaccctggagatggatgaggtttctgaacctgagaacgagggatgccagggcagggggagggacgccagccagggcctgtggagagtcctactaggaaccccactactcctttcctgccccagagtgctaagaacccacaggctccagaccttccaaaatgaaaagctgtttccttctgaagccagagccatactcttcaacggcagagcccaccggctttaggggtcctgctttcccactagctgctgtccagctctgccaccggctctgggtgtgtgaggcagggcaagaggtgttgaagtctgcactccctgtcacctcccagaagcctccctatgcccaggtccacctgcttgttgctgctgagcgccaggcgtggaggctccagaaacaggagtttgagaaggagcacgctttattagggacagagcactgcacgtgaccaacagatgaaggcagcctcgggggcatcctacacatcacactcaaaaaggtacacaggagattttgctaataagaaagagcaactggaacatgggttcctctgggcaactaccccaacctcccatcccttcaaggggtcgggacaaccccaatcatctccttgaaggcagctgtggtccgctagagatacagtccctcaggggtgccttcttgttttttataaagaacattttctttaga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]