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Previous release (v1)
2025-12-08 09:45:43, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_011517266 3581 bp RNA linear VRT 20-DEC-2024 DEFINITION PREDICTED: Nothobranchius furzeri dicer 1, ribonuclease type III (dicer1), transcript variant X3, misc_RNA. ACCESSION XR_011517266 VERSION XR_011517266.1 DBLINK BioProject: PRJNA1195976 KEYWORDS RefSeq. SOURCE Nothobranchius furzeri (turquoise killifish) ORGANISM Nothobranchius furzeri Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091758) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_043380555.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/11/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3581 /organism="Nothobranchius furzeri" /mol_type="transcribed RNA" /strain="GRZ-AD" /db_xref="taxon:105023" /chromosome="18" /sex="male" /tissue_type="skeletal muscle" /dev_stage="adult" /geo_loc_name="Japan: Osaka" /collection_date="2024-02-02" gene 1..3581 /gene="dicer1" /note="dicer 1, ribonuclease type III; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 902 long SRA reads, 3 Proteins" /db_xref="GeneID:107395773" misc_RNA 1..3581 /gene="dicer1" /product="dicer 1, ribonuclease type III, transcript variant X3" /db_xref="GeneID:107395773" ORIGIN
ataaataaataaacaaagtaattaattaatttaaaaagtgagtattcagttaaaagctaagctaaaaagatgggtcttcagcctgaacgttcagcagccctgaggtccctggcagctcgttccagaggcgaggaccgtcaccggaaggacgccactccgcacctgcaccgttaccttcggaggcgggccctgctccgtatgctccgtatgcaaggtttctattctcgtaaatttacgctcacgttgtgccgcagcttctaaagctacgcagttagcgtaaacatgtctgtggttagcgtccgtgtttttgcgtagcggaggcccagctgaacgctagttctccccgtggacgagcagcaaatcggaacaagtctggatggcacaaacaattcttcggaaccagtccacgtactttcggttggctcgatctggagcagttaaagcagcaggtctggttccttctgatcattgagaaccaccaggacatcagcagaactctgatcatgtagcccagactactcatcttctctcattgaactctaaaggagaccagaagatgaaataaacatctggaggagctcagccccttcacccctctcccagaagcatggcgggcctacagctcatcactccggccacttcgcccatggggcccttcttcggtctgccatggcagcaggaggccattcacgacaacatctacacaccccggaaatatcaggtggaacttcttgaagcagctcttgaacgcaacacgattgtctgcttgaacacggactcagggaaaactttcatcgccgtgcttctgactaaggagctctcccatcagatcagagggagctaccaggggaatgccaggagaactgtgttcctggtggactcagcgtcgtatgtggttcagcaagcggctgcagtcagaactcactcggacctccaggtgggagaatacacagactgggaggaggcgtcggcgtggacgggtcagcggtggagtcgggagatatgtgacaatcaggttctggtgatgacgtgccacgtgttcctgcatgttctgaagaacgacatcctgccgttgtctaagatcaacctgctggtgtttgatgattgtcacctggccatcacagagcacccatatggtgacatcatgaagctgtttaaagacacaggtggccctcggatcctgggcctcacggcctccatccttaacgggaagtgtgatccttcagaactggagcagaaaatccagaacctggagagaatcctgaagagtaaagctgaaacagccactgacctggtggtcctggataggtacgcttcccagccgagggaggtggttctggactgtggaccctacctggacaaaagcggcctctcgagccgtttacgggcagaactggacgaagctcttctcttcctcggtgactgtaacacggccggttcccgagacgaccgggacccgacgtttatctccaaacagatcttgagcgactgccaggctgtgctgcaggttctgggtccctggtgtgctgacaaggccgcgggcatcatggtgcgtgagctgcagaagtacatcaaacatgagcaggaggagctgaaccgcaagtttctgctgttcaccgacaccatcctgcggaaagtccacgctctgtgtgaggagcgcttctcccctgcttccctggacctgaagtttgtcacacccaaggtcctgagactgctggagatcctgcacgaatacaaacctttggagcggcagcagttcgagagcgttgagtggtacaacaaccggaaccaggacaactacgtgtcctggagcgattcagaagatgacgatgaagacgaggaggtggaggccaacgagaggcctgagactaacttcccctcccccttcaccaacattctgtgtgggatcatctttgtggagaggcgctacacggcggtggtcctgaaccgattgatcaaagaggcggggaagcaggacccggagctggcctacatcaacagtaacttcatcaccggccacagcatcgggaagaaccagccgaggaacaaacagatggaggtggagttcaggaaacaggaggaggtcctgagaaagttccgagctcatgaaaccaaccttctgatcgccaccagcatcgtggaggaaggcgtggacatcccaaagtgcaacctggttgtgcgattcgaccttcccgcagactaccggtcctatgtccagtccaaaggccgagcccgtgcccctgtctccaactacatcatgctggctgactctgagaggaccaagagctttgaggaggatctgaccacctacaaggccatcgagaagatcttgaggaacaagtgtttcaagtcagtggaggtgggcgagttggaagcagatcaggccttggatgatgatgacgtccttcctccatacgtcctgcagtcagaggacggaggtccacaggtcaccatcaacacggccatcggacacatcaacaggtactgtgctcgactgccgagcgacccattcactcacctggcgcccaaatgtaaaaccgtggaaaccaaggaccgaagcttccagtccactctctacttacccatcaactctcctctgagagttcctgttaagggtcccatcatggtctgctcccgcctggcagagaaagctgtggcgcttgtctgctgtgagaagcttcataaaataggtgagctggatgatcacctgatgcctgtaggaaaggaaaccgtaaagtatgaagaggagctggacctgcacgatgaggaggagacgagcgtcccgggtcggcctgggtccactaagagacgacagtgctaccctaaagccataccggagtgtctgcgggacagttacaccatcctggagcagacctacttcctgtacgtggttgggatggtcctcaccactcctctccctgatgaactcaattttcgcagaaggaagctgtacccgcctgaggacaccacccgctgcttcggcatcctgacggccaaacccatacctcgtatccctcacttcccagtgtacacccgttcaggtgaggtgaccatctccatcgagttacagaaaagtggcttcatgctcagcgctgcccagctggacctcatcacacgcatgcatcagtacatcttctcacacatcctccgcttggagaaacctgccctggagttcaagcccacgcaggctgactcggcgtactgcgttctacctttgaacgttgttggagactcccacactctggatatggactttaagttcatggaagacatagagcagtctgaggcccgcacaggcattcccaccactaagtacaccaagcagaatcctttcatcttcaagctggaggactaccaggatgctgtcatcattccaagagtatgagacgttcgctgagtactacaaaacaaagtataacctggacctgtccaacctgaaccagcctcttctggacgtggaccacacgtcctccagactgaacctgctgaccccccgacacctgaaccagaaggggaaagctctgcctttgagcagcgcggagaagaggaaggctaagtgggagagcctgcagaacaaacag
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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