2025-04-02 17:58:29, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XR_011461081 1257 bp RNA linear INV 12-DEC-2024 DEFINITION PREDICTED: Littorina saxatilis uncharacterized lncRNA (LOC138983323), ncRNA. ACCESSION XR_011461081 VERSION XR_011461081.1 DBLINK BioProject: PRJNA1148619 KEYWORDS RefSeq. SOURCE Littorina saxatilis ORGANISM Littorina saxatilis Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Caenogastropoda; Littorinimorpha; Littorinoidea; Littorinidae; Littorina. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_090256) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_037325665.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/06/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1257 /organism="Littorina saxatilis" /mol_type="transcribed RNA" /isolate="snail1" /isolation_source="shore boulder field crab ecotype" /db_xref="taxon:31220" /tissue_type="muscle from the foot" /dev_stage="adult" /geo_loc_name="Sweden" /collection_date="2017" /linkage_group="LG12" gene 1..1257 /gene="LOC138983323" /note="uncharacterized LOC138983323; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:138983323" ncRNA 1..1257 /ncRNA_class="lncRNA" /gene="LOC138983323" /product="uncharacterized lncRNA" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:138983323" ORIGIN
tttgactcacatgcgaagcaaaagtgagtctatgtactcacccgagtcgtccgtccgtccgtcccgccgtccgtccgtccgtccggaaaactttaacgttggatatttcttggacactattaagtctatcaacacctgatgtggcctgatggtgtatggttacaagatctcaaaaaacatgtgcggcaacttgacctcacttcaagttcaaggtcacaggggccgtaattgttgtcttaaaaacgaccatttttcacattttcgcatttttttctgaagttatcgagaatggcaaccttagctatgtatgctatacagggcaatgtaagccctatctttggacaccagtttggttgaccttgcttcaaggtcaaggtcgcaagggtcctttaaagttggattgtatacatagtttgaaatgaccttgaccttgaactatggaaggtaactcttccaaatctacatatgtgtgagggaaatacattatacttacaaaagtgagtctatatactcaccgacatcgtccgcctgtccttccgggcgtccgggcgtccgtcccccccccatccgtctgtgaaacctttaacattgtatatttcttggacactattaagtctatcaacaccaattgtggcctgatggtgtatggttacaagatcttcagaaacatgtttggcaacttgacctcacttcaaggtcaaggtcacagggtccttcaaagttgaaatgtatatattttgaagtgaccttgaccttgaactattgaaaataactcttccaaaactacatatgtgtgagggaaatacattagatcttcagaaacatgtttggcaacttgacctcacttcaaggtcaaggtcacagggtccttcaaagttgaaatgtatatattttgaagtgaccttgaccttgaactattgaaaataactcttccaaaactacatatgtgtgagggaaatacattatattttcataataactcacattaggttacatatcttcaagttccaggtcagtttgagttaaactgatatttgtcaaaaaagagaaaacaggcgccagactagagagaagtcggagaactgacgttccttgttcgactcgatcccctaatgaccagcgattagcattttaggatggagaaccttttgacacagtatgcaccataacttggatgcaattactgaatgtgcaactcacaatggcattagttttctgtaattattttctttactgaataaatattgtttttctcag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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