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2025-12-08 09:45:43, GGRNA.v2 : RefSeq release 232 (Sep, 2025)

LOCUS       XR_011359458            2409 bp    RNA     linear   VRT 18-NOV-2024
DEFINITION  PREDICTED: Dendropsophus ebraccatus dicer 1, ribonuclease III
            (DICER1), transcript variant X4, misc_RNA.
ACCESSION   XR_011359458
VERSION     XR_011359458.1
DBLINK      BioProject: PRJNA1181002
KEYWORDS    RefSeq.
SOURCE      Dendropsophus ebraccatus (hourglass treefrog)
  ORGANISM  Dendropsophus ebraccatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Hylidae;
            Hylinae; Dendropsophini.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091466) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_027789765.1-RS_2024_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/13/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Dendropsophus ebraccatus"
                     /mol_type="transcribed RNA"
                     /isolate="aDenEbr1"
                     /db_xref="taxon:150705"
                     /chromosome="13"
                     /sex="female"
                     /tissue_type="whole body, brain, muscle, liver"
                     /dev_stage="adult"
                     /geo_loc_name="USA: Vassar College, Poughkeepsie, New
                     York"
                     /lat_lon="41.684639 N 73.895553 W"
                     /collection_date="2018-03-28"
                     /collected_by="Justin Touchon, Erich Jarvis"
     gene            1..2409
                     /gene="DICER1"
                     /note="dicer 1, ribonuclease III; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:138770296"
     misc_RNA        1..2409
                     /gene="DICER1"
                     /product="dicer 1, ribonuclease III, transcript variant
                     X4"
                     /db_xref="GeneID:138770296"
ORIGIN      
ggagcccgtcagcccccgcatccttccgccgtgtggggtctcatgagcccggcctggccccgcgggtctaagaacctccaggacggctcataaacagctctgagggatgatgatgtcacagaaggtttcaagagttatcgcgtttgtgacgtctcaggctgaaatagaaagctgtgcccaccccctggctgcaatgatctaagtcactggatgatagagaccctcagcatggcaggcctgcagctcctgaccccggcctcctcacccatgggccctttctttggactgccctggcagcaggaggcaattcatgataatatatacacccctaggaaatatcaggtggagctgctggaagcagcattggaccacaatactatagtgtgtttgaactctggctcagggaagacgttcatcgctgtactacttactaaagagctgtcctatcagatccggggagacttccacacatccgccaagagaacagtgttcctggtcaactctgataaacaagttgcccagcaagtgtctgcagtccgcactcactcagatcttaaggtcggggaatattccagtctagaagtcgtggaaagttggtcgaaggaaaaatgggacgaagaatttgtggctcatcagattctggtgatgacttgtcacatcttcctcagtgtcctgaagaggaagagcctctccttatgcaagatcaacctcctggtgttcgatgagtgccacctcgccatccaggatcatccctatcgggagattatgaagatctgtgaaggttgccagacatgtccacgaattttaggactgaccgcctccatactgaacgggaaatgcgacccccgcgaccttaaagagaagatccagaaactggaggaaattctgaagagtaatgctgaaacggcaactgatctggtggttttagacaggtacgcctcccagccctgtgagatcgtactggactgtggtccctatcacgacaaaagcggactctatcagaggctcctgcatgaactggacgactcgctgcacttcctggatgactgcaacattcccattgtatctaaagagagagattcaacctccatctctaaacagatcctctctgactgccgggcggtcctgctcgtcctcggtccgtggtgtgctgacaaagttgccgggatgatggtgagggaactgcagaaatacattaagcacgagcaagaagagctgcaccggaaatttctgctgtttacagacaccatcctaagaaagatccacgctctgtgcgaggagcatttctcccctgcctccctcgacttgaaattcgtcacccccaaagtcataaagcttctggagatcctgcgcaagtacaagccctacgagcgacagcaatttgagagcgtagagtggtacaacaaccgcaaccaggataactatgtgtcgtggagtgactctgaggatgatgaagatgaggacgaggagatagaggagaaagagaagacagagaccagcttcccatcgcctttcaccaacatcctgtgcgggatcatctttgtggagcggagatacacagcagtcgtcttaaataggttgatcaaggaggctgggaagcaggacccagagctggcgtacataagcagcaacttcataactggacacggcattggaaagaaccagccccgaaacaagcagatggaagtggagtttagaaaacaggaggaggttcttcgaaagttcagagctcatgagaccaacctgctcatcgccaccagcattgtggaggagggggtggacatccccaaatgcaacttggttgtccgcttcgatctgccgacagaatacaggtcatacgttcagtccaaaggtcgggcccgggcccccatctccaactacatcatgttggcggacactgacagaatcaaggggttcgaggaggatctgaaaacctacaaagccatcgagaagatcctgaggaataaatgctccaaatcgctggattgtggtgacacggagtctgaccccattgtggatgacgatggactttttcccccatatgtgctcaggcaggatgacggcagccccagggtcaccctaaacaacgccattggccacatcaatcggtattgtgctcggctgcccagcgaccccttcacccacctcgctccaaaatgcaaaacccgggaggtgtccagcgctctgtaccaggcaactctttacctgccaatcaactccccactcagagcccccattgttgtaagtacttgggcccatccatgaactgcgccaggctcgccgaacgagcggtagctcttatatgctgcaagatgctgcaccagatcggtgagctggacgaccatttaatgccagtcggcaaggagacggtgaaatacgaggaggagctggatctacacgatgaggaag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]