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2026-11-11 15:33:40, GGRNA.v2 : RefSeq release 233 (Jan, 2026)

LOCUS       XR_011024179            2460 bp    RNA     linear   VRT 10-SEP-2024
DEFINITION  PREDICTED: Hyperolius riggenbachi dicer 1, ribonuclease III
            (DICER1), transcript variant X3, misc_RNA.
ACCESSION   XR_011024179
VERSION     XR_011024179.1
DBLINK      BioProject: PRJNA1153528
KEYWORDS    RefSeq.
SOURCE      Hyperolius riggenbachi (Riggenbach's reed frog)
  ORGANISM  Hyperolius riggenbachi
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Neobatrachia; Microhyloidea;
            Hyperoliidae; Hyperolius.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_090654) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_040937935.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/28/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Hyperolius riggenbachi"
                     /mol_type="transcribed RNA"
                     /isolate="aHypRig1"
                     /db_xref="taxon:752182"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="blood, heart, liver, eyes, gonads, brain,
                     heart, muscle, whole body"
                     /dev_stage="adult"
                     /geo_loc_name="USA: San Francisco, California"
                     /lat_lon="37.770050 N 122.466362 W"
                     /collection_date="2020-09-11"
     gene            1..2460
                     /gene="DICER1"
                     /note="dicer 1, ribonuclease III; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:137533362"
     misc_RNA        1..2460
                     /gene="DICER1"
                     /product="dicer 1, ribonuclease III, transcript variant
                     X3"
                     /db_xref="GeneID:137533362"
ORIGIN      
cgtcagagcggagagtcctggcggagggatcacgggccgcgctgctccgctctcccccggctgagcacaacgggttgccgagagtgatactgagttaccagcagcgggccgcggggacgtctcataatcaacgctgaggtaaaggattacgcagatatgatgtcacagagcgtcacatgtaccacccccctgctgtcatcacaagctaaagctgaaagctgtgcggctgctcagttgcaatgatttaagtcgctggatgtgggagagactttcagcatggcaggcctgcagctcctgaccccggcctcctcccccatgggccccttctttgggctgccctggcagcaggaggcaattcatgacaatatttacacccccaggaagtatcaggtggagctgttggaagcagctttggaccacaatactatagtatgtttgaattctggctcagggaagactttcattgctgtactacttactaaagagctgtcctatcagatccggggagacttcagtaaaggcaccaagaggacagtattcctggtcaactctgctaaacaagttgcccagcaggtctctgcggtccgaactcactctgatctcaaggttggggagtattccgatgtggaggtggtggagagctgggcaaaggagagatggaaccaagagtttgggaatcatcagatcctcgtcatgacctgcaacatcttcctgaacgttctcaagagccaaagcctgtcattagccagcatcaatttactggtatttgacgaatgccatctcgccatccaggatcacccgtatcgtgacatcatgaagatctgtgagcgatgccagacgtgtccgcggatcctggggctgaccgcgtcaatcctgaacgggaaatgtgacccctgcaacctggaggagaagatccagagactggaggagattctgaagagcaacgccgaaactgcaaccgatctggtggtgctagacaggtacgcctctcagccctgcgagatcgtgttggactgtggcccgtaccacgacaagagcgaactgtatctgagactgttatcagaactggaggaggctcttcacttcctggaggactgcaacattccaatccaatctaaagagagggattctacagccatctccaagcagatcttgtcggattgccgagcggttctggtggtcctcggtccctggtgcgcagataaagtggcggggatgatggtccgggaactccagaagtacataaaacacgagcaggaggagctgcaccgcaagttcctgctcttcaccgataccatcctgaggaagatccacgcactctgcgaggaacatttctccccggcttccctggacctcaaatttgtcacccccaaagtcctccagctgctggagatcttacgaaagtacaagccctacgagcgccagcagttcgaaagcgtggagtggtacaacaaccgcaaccaagataactacgtctcctggagcgactctgaggatgatgacgacgatgaagacgaggaggtcgaggagaaagagaagaccgaaaccagcttcccttcgccgttcaccaacattctctgcgggatcatctttgtggagcgacgatacacagcagttgttttaaatcggctgattaaggaggccgggaagcaggaccccgagctggcttacattagcagtaacttcataactggccatggcatcggaaaaaaccagcccaggaacaagcagatggaagtggagttcagaaagcaagaagaggtccttcgaaaattccgagcacacgaaaccaatttgctgattgccaccagcattgtggaggaaggcgtggacattccaaagtgcaacctggtggttcgctttgacctgcccacggaatacaggtcttacgttcagtccaagggtcgcgcaagggcccccatctcaaactacatcatgctagcggacacggacaggataaaagacttcgaagaagatctgaagacctataaggctattgagaagattctgcgtaataaatgttccaagtccatggattgtggggagacggagtccgaagccattgtggacgatgatgagatcattcctccttatgtgttacgtcaagatgatgggagcccacgggttaccataaacaccgccattggccatattaaccggtactgtgcccggttgcccagcgacccgttcactcacctcgctccgaagtgtaaaactcgggaaacattagacggcctgtatcggtccaccctctacctgccgataaattcccctctgagagcccccattgttgtaagtacctgggtccttctatgagctgtgcaagacttgctgagcgagccgtggccctgatatgctgcaagaagctgcatgaaataggtgagctggatgaccatttgatgcccgttggcaaggaaaccgttaaatatgaagaggagttggacctacatgacgaggagg
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]