2024-09-08 11:38:22, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS XR_010405301 4606 bp RNA linear MAM 25-APR-2024 DEFINITION PREDICTED: Mirounga angustirostris NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X4, misc_RNA. ACCESSION XR_010405301 VERSION XR_010405301.1 DBLINK BioProject: PRJNA1100993 KEYWORDS RefSeq. SOURCE Mirounga angustirostris (Northern elephant seal) ORGANISM Mirounga angustirostris Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Mirounga. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_026991717) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_029215605.1-RS_2024_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/19/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4606 /organism="Mirounga angustirostris" /mol_type="transcribed RNA" /isolate="CCGP_5_RB_7025" /db_xref="taxon:9716" /chromosome="Unknown" /sex="female" /tissue_type="whole blood" /dev_stage="adult" /lat_lon="37.114554 N 122.329689 W" gene 1..4606 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 Proteins" /db_xref="GeneID:123861858" misc_RNA 1..4606 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X4" /db_xref="GeneID:123861858" ORIGIN
cttcccagagtgcaccgcgagcgcgaaggcctcactaccggcgtccgctcgccggcgccatttctgtcgaggggaacggcagtgcggcctgtgatcatggcgctgttcccggcctttgccggtattggtgacgctcccaacagcggcagcgcccggaaagaattagattggctgagcaacccgagcttttgtgtcggagccataagctctctgagccaacaacctgaagaggctgccgctctggtttctgaagggtcaccgctgacgaggagtcctctgaaatcagagccttcagatgaaagtgatgctaacggaaagcccaaacaaacaagcagaaaaaagaagaaagagaagaagaagaggaggaaacgtcaccacaagaaaaccaagagaaaacgtgggcaggccagtagcagtggctccgagccggatagtgagcctgaagaggacaaaacttccagaagccctggagatagtagaagggaatcggagaaacccagtcaagaaggtaatgctgccgctgatattgggcatcgctttgtttggcttgaggacgttcaggctctgactggagaaaccttcagaacagataagaaaccggatccggccaactgggagtataagtctctctaccgaggagacatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgtatatcctgggagagggctgccgcagaaaagaagccttcacacaagcgtgttgagcgctattttacgaagaagagcgtgggcttaatgaacatggacggagttgccgttggcagtaaaaccgaacctccctcgtctgagccgatctcgtttatccccgtgaagggctcggatgatgtggttcctcccgttacgacctggttgaaccctctggggatttacgatccgtccaccgcgcagtggttacaaggacagggccctccagagcaagaaccaaagcagccagactcccagacagacagagagcgcgcgctgctcaaggccaaggtggaggagttcaacaggagagtgcgggagaaccctcacgatattcagctgtggatggcgttcgttgcttttcaggacgaggtcgtgcggagccccggcctgtatgccctggaggcaggggagcaggagaagcggaagaggtctgcgaagctggtgctggagaagcagctggctgtcctggagcgggccatcgagagcaaccagagctccgtggagctgcagctggcccggctgaagctgtgcgccgagttctgggagccctcggcgctgctcagggagtggcagaaactgatctttgtgcaccccaacagtacggccctctggcagaagtaccttttattttgccaaagccagttcagcaccttcaccgtgtcgaagatccacggtctttacggcaaatgcttgagcactctgtccgcggtgcaggacggcagcatcctgtcgcaccccgccctgcccggcaccgaggaggccgtgttcgctctctttcttcagcactgtcacttcctgcggcaggccggtcactctgagaaggcgatctcgctcttccaggccatggtggacttcaccttcttcaagccagacagcgtgaaagacctgcctaccaaaggacaggtggaattctttgagcccttctgggacagcggggagccccgggctggggagaagggcgcccgaggctggagagcctggatgcaccagcaggagcgaggcggctgggtggtcatcagtccagatgatgatgatgacgaaccagaagacgaggaccaggaaataagagataagagtctgcccaggtggcagatctggctcgccgccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaagaagcaaactgaagaagactgtgaggacccagagagacaggtgctgttcgatgacattgcgcagtctctgatccagctctccagccgggatcttcagtttcagctggtcgcggcctttctgcagttcctgggcgtgccttctggcctcagccccccggcctcctgcctctacctggccatggacgaggacagcatcttcgataacgggcttcatgatgaaaagccattgacttttctcgacctgtccttttccggcgtcagctgtgttggccgctcagacccactgggctgccgtcgctggacccgcgggcacaatcgagagggcgaggagttcatccgtaacatctttcaccttgtgatgcctctgttttcaggccaggagaggtctcagctctgcttttcctggctacggtacgagatggcgaaggtcgtttggtgtctgcacactaaaaacaagaagaggttaaagtcacaaggaaagaactgcaaaaaacttgccaaaaacctcctgaaggagccagaaaaccgcaacaacttttgcctctggaagcagtacgcacatctggagtggttgctcggcaacaccgaggacgccaggaaggtgttcgacagggcgctcagcctggcggggggcggagagccgcggggctgcgagccctgggagctcggcctgctctacgcggggctggagctggagctggagctggagctggagctgtcgccggccgcgagaggggccgccacggcccgagccgtccacatactgaccgggctggcggagaatggtccctacgcgccctactccgggccggtctcggctgttcacgttttgaaggcccggaaggcttacgaacacgcgctgcaggactgtcgggggcagagccgtggcgctgggccgcctcccgccgacgcctctcaccgcctcaccggcctgctcaggtgcttcatgctcttccagtacttgaccgtggggatcgaagccgctgtgcggatctacgagcaggcgtgtgcgcagctgcagggctccgtctccgcgggcggctgtgggccggacgagcccggctgcgcgcagagcccgggccgcggcctcgaggccgtcgcgctgatgcacacgagcctgctgcggttccacgcgagggtcagcgtgtgccccgtggctcctctgcagcaggcgctctcggacgccttacggtggtaccccggcagccaggttctgtggcgggcctacgtacagcttcagagtaagtcccacacggccagtaagaccagaaggttcttcgatgccattaccaggtctgccaaacccttggagccgtggttgtttgcgattgaagccgagaaaacgaggaagaggctggtggaaaccgttcagagggtggatggcagagaggtccacgccacaattcccgagaccggcttgacgcatcggatcgaagccctgtttgaaaatgctttgcggagcgacaacggcagccagtgccccttactgtggagaatgtatttgaactttctggtctccttgggaaacaaagaaaggagcaaaggcgtgttctacaaagcacttcagaattgtccttgggcaaagacgctgtacctggatgccgtgggccacttccctgaagagatgcaggaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcccgtggaggagttggagcttctactcgaggactagagaccaggaggtgttcaacagtccctgccttcagggcctcgtcgcctgcactgctggagccgggatgcagcagacggggcacgtgtaagaatcctgccccatgacaacggaatctctcgtggttggcgtgttcgagtgtgttctcttcctctgcggccccggccccgccgtggcgagtgcgtcctgttggttggccttcttggcggtcctgccagggtttctgggtcttgcagtcatgataggaaaggttcggtgactcaacgctagaacctcttcccaggctggttagcaggagagcagattttgctcttctcttcaggccacagccctggagtccctgagaacttggtgttccggcctgtgtcaagtgtaggaagcgtctcgtggtccctaagctcttcttgacgcctcccggctgtggaccagcagcatcgcctgggcgcgctgcagcctcgcacttggacaggacccctggagacttaggagcacccaggtgtgggagggacccctgctgcagggggcacgcgggcagccatccgagcggagcagaatggagcggcggcctcctaccagaccctgcccgcccacgagccgggccccggacgccctcatgtgggtgcagcagtgccgcccaggacagaggcctgcactggccgccgccttgatgtctgagggttgtgaatggaatgaaatgtaaatacccacattcagaccactttcttctgaagagaacatggctgcagttattaactgttagtatttaactaggaggaaattgctttatcttctctgagccctgctctcaaacaaaaccacgatgcctctaactgctgaagttgtcgttctttggcagctcatccagaaaagccagtgtcatggaacaaaattttggctcaaaacagctggaaaaggaggatggcaagtcagagcccccgaggaaggcggccggccagccagccaaggggacgcttgccgtgcctgcccggctcactccccg
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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