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Previous release (v1)
2025-10-26 08:17:10, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_009958593 3610 bp RNA linear VRT 29-JAN-2024
DEFINITION PREDICTED: Rhea pennata NRDE-2, necessary for RNA interference,
domain containing (NRDE2), transcript variant X4, misc_RNA.
ACCESSION XR_009958593
VERSION XR_009958593.1
DBLINK BioProject: PRJNA1054191
KEYWORDS RefSeq.
SOURCE Rhea pennata
ORGANISM Rhea pennata
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Palaeognathae; Rheiformes; Rheidae; Rhea.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_084667) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_028389875.1-RS_2023_12
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 12/20/2023
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3610
/organism="Rhea pennata"
/mol_type="transcribed RNA"
/isolate="bPtePen1"
/specimen_voucher="899214"
/db_xref="taxon:8795"
/chromosome="5"
/sex="male"
/tissue_type="heart muscle"
/dev_stage="unkown"
/geo_loc_name="USA: San Diego Zoo"
/lat_lon="32.73547391 N 117.14903527 W"
/collection_date="2012-12-14"
/collected_by="San Diego Zoo"
gene 1..3610
/gene="NRDE2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein"
/db_xref="GeneID:134141329"
misc_RNA 1..3610
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X4"
/db_xref="GeneID:134141329"
ORIGIN
catcttgcgtggccgaccggcagggtagcaagcgcaagtggaagtggcggcgagccgggacatggccctcttcccggcttttgccggtgcagccgagctgggagagaacccagccagcagcagcgaaggctcccggagagaattggactggcttagtaacccaagcttctcaacagaagatgcactattactgcatcagcgcactacagaaactgcaaaactcacccctgaaaaatcaccactaataagcaggaatacttcaagatcagatctgtcaggggaaagtgatacagatgagactctaaacaagacaagtaagagaagaaaaaagaaaaagaaaaagcatcatcaacataggaaaacaaaaaggaaaaccagaggggattccagtagcagtgaatcagaccttgactctaagtgcatcaaggacaaagtcacaggacgtggcagaaatcgtgaaaaagaagcagcagtaaatctagatgataaaacatcaaatcttactagcaatcgctttatttggcttgatgatatccaggctttcacagcagaaacgttcagaatagacaagaaatcagatcctgcaaactgggcctacaaatctctgtatcgaggggacatagcaagatataaaaggaaaggagagtcctgtcttggcatagatgtgaagaaacagtgtataacttggaccagttctgcgtcagaaaagaagcgatcacagaggcaacctgagcgctattttacaaagaacaatgtgaagatgctgaacacagatgggattcctgtttacaattcctgttctccatctgaccccgctgcctatataccagtttcccaaatagaaactgacgatcctcctgacacaacagaagtaaatcctcttggggtttatgatccctctactacaatgtggctgcaaggaaaagggtgcaagggtacagaccttgagcctgtgaaggagcaggtgttccaagagcctgggctaaatactaactccattctaatgtcaaaagtggaagagcataacaagaaggtcagagaaaacccaagagatattcatgcttggatggagtttgtttcctttcaggatgaattaatgagaggacctagcccttatgtgagtaagggagaacaggaagtaagaagaaaatcactgaagttaatcttggaaaagaaactagctattttagagagggctattgaaagcaatccaagtaatgttgatctgaaactcgccaggctgaagctttgcaccgagttctgggaaccaccagctttgatcaaagaatggcagaagctaattttcttacatcccaataatccagacctgtggaagaagtatctcctgttctgtcaaagtcagttcagtaccttttctgtttcaaaaatcaatagtctctatggaaaatgtttgactacattggcagctgtacgtgatggtagtatggtatcacatccactgctgcctggcacagaagaagctatgttagcgatatttcttcagcagtgccattttctgagacaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgtcaacaaggggacaggtggaattctttgaaccattttgggatagtggagaacctcgaattggagagaaaggagcaagaggctggagcgcatggattcatcaacaagaaaagggtggctggatagctgtaaccaaacctgatgatgatgatgaagatctagatgaggatcaagaaataaagaataaaactctaccaaaatggcaaatttggctggatattgaatattctcgtgaagcaagacagtggttaccttggaggccagacaaaaccaaaaagcagactgaagaagactgtgaagatccagaaagacaggtattatttgatgatcttggaccatctttaatccagctttctaatccagatcttcagcgtcaactactatactcgtttttgcaattcctgggagtaccatgtacaagtagactctttccttcaagcctctatattgccatggataaagacaatatttttgacagtgtgctttctgatgaaaagccattgacttctattgatttgcaactctctggattcaacagcattggtcatatggatacaatgctgggagggagacatcatgtaggccactataaggaaggagaggagttcatacagaatgtttttcatgttctattcccactgttttctggaaaggaacaatccagtttgtccatttgttggttacagtatgaaatatctaaggtagttcaatgtctccaaacaaaaaacaagaagaagttgaaagtacaagggaagaaaagtaaaaaattggccaagaatctccttaaagcacctgacaacagaaatcacctttccctctggaaactgtatgcctacctagaatggcttcttggtaacattgacgatgctagaaaagtatttgatacagctcttagcacggcagcgacaggaggaatgaagaatccccagctctgcagtttgggtctgctctatgctcagctggaagtggaactgctggaaagtctagaaggagctgtcatgtcacgtgctgttcatatattgaccaaactggctgaaagtggaccatacgtgccttacagtggacaaatactgtctgttaatatcttgaaagctaggaagacatatgaccacatattgcaagattatttaagtaaaaccccagtttctaatcaggatcaggtcagtgactctaatcagctggttaacttggttggttgttatgcaattttccagtatttaactgttgggattgatgctgcagtattaatatatacagaagctttggaaaagcttgaagttcctgactcaaagaaatgtgaaaatactggagagaatcttggcattcaaaatttccctacagctcttgaagctatcacactgctgcatacaaacttgctcaggttccacatgaaaattagtgtttatcctttgaatcctctgcgagaggcactaacagaggctctgaaacggtatcctagcaaccagtctctttggaggtcatatatccagatccaaaggaagtctcacaatgctagcaaagcacgaagattttttgatggtgtcacaaggtctactgactctttagagccatggctgtttgcaatccaagcagagcagatgagaaaaaaactcattgagaatgttcaaagaaaacaagtctgcttagatgaccaaagtggacattattagcttagaaattgctaaatcttagtaccacagaaataaggagtataacatagagctacattccagtttcttgctgagcttgctgccctgctttactcctggatcacagaatacagttgtggcagatttatctgtttccatagtgattacttgagagtttaatctttatatggagttgttgctatgtagaagaggctggaaatttcctgaaatcacagtgtagtctgcgctcagcagatcttttgctcctgggcaaggaggaaaatgtgagtaggaaatggcagatgttggtgaagtacattataccattcccgaaactggattaacaaatcggat
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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