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Previous release (v1)
2025-10-28 01:38:55, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_009864795 3810 bp RNA linear MAM 10-JAN-2024
DEFINITION PREDICTED: Lepus europaeus NRDE-2, necessary for RNA interference,
domain containing (NRDE2), transcript variant X5, misc_RNA.
ACCESSION XR_009864795
VERSION XR_009864795.1
DBLINK BioProject: PRJNA1061222
KEYWORDS RefSeq.
SOURCE Lepus europaeus (European hare)
ORGANISM Lepus europaeus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha;
Leporidae; Lepus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_084848) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_033115175.1-RS_2024_01
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 01/05/2024
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3810
/organism="Lepus europaeus"
/mol_type="transcribed RNA"
/isolate="LE1"
/db_xref="taxon:9983"
/chromosome="22"
/sex="male"
/cell_line="ZFMK-TIS-69753"
/tissue_type="Fibroblast"
/dev_stage="adult"
/geo_loc_name="Finland: Ilomantsi"
/collection_date="2018-10-25"
/collected_by="Jaakko Pohjoismaki"
gene 1..3810
/gene="NRDE2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins"
/db_xref="GeneID:133751238"
misc_RNA 1..3810
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X5"
/db_xref="GeneID:133751238"
ORIGIN
gacggcggaggcttcaaaccggcgcttggctgccgccgccatttctgtagaggggaagggcggagaaagctgcgttgatggcgctgttcccggcctttgcgggcgtgagtgaggcccccgatggtgggagctcccggaaagaattagactggctgagcaaccctagcttttgtgttggaagcctgccgtcgctgagccaccaaactgaggagcccacggccctggtttctgaaggggcaccactgccaaggagttctttgaaatcagaacctgcagatgaaagtgacaccgaccagaagctcatccaaacgagcagaaaaaagaagaaagagaggaagaagaagaggaagcatcagcatcacaggaagacaaagagaaggcgcaggcagtctggcagcagtgagtctgagccgaacactgattctgccgaggacgggccctccaggggcagcaggagggcctccgagaaaccaggtccaggaagtaactctgctgcggagactggacgtcgccttgtttggcttgaggatgtccaggctgtgagtggagaaaccttcagaacagataagaagcctgatcctgccaactgggagtataagtctctctaccgcggcgatatagcaagatacaggaggaaaggagattcctgccttggcataaaccccaagaaacagtgtatttcttgggaaggggcttccacaggaaagaagcggacccgtaagcatgtcgaacgctattttacaaagaagagtgtgggactgatgaacatcgatagcgtcgccattaccagtgaaactgcatctccctcggcggagccaggcccctttatcccagtgaaggactcggatgatgtgactgctcctgttgcagcctggctgaatcctttaggggtttatgatcagtcaaccacacagtggttacaaggacagggtccttccgagcaagagtcaaagcagcctgactcacaggcagacagagagagtgctgctctcaaggccaaggtcgaggagtttaacaggaaagttcgggagaatccttgtgatactcagctgtggatggcattcgttgctttccaggatgaggtcatgcggtgtcctggtctgtacgccatcgaggacggcgagcgggagacgcggaagaagtccctgaggctgctcctggagaagaagctggccgtcctggagcgggccgtcgagagcaacccgagcagcgtggagctgaagctcgccaagctgcagctgtgtgccgagttctgggagccctccgctctgctcaaagagtggcagaaactgatttttttacaccctaataatacagccctttggcagaaataccttttattttgccagagccagtttagcaccttctcagtatcaaagattcacaacctgtatggaaagtgcttgagtactttgtcggctgtgaaggacggcagcgtcttgtctcaccccgcgctgcctggcacggaagaggcgatgtttgcgctctttcttcagcagtgccactttctgcggcaggctggccactcggagaaggccgtcgctttgttccaggccatgattgacttcactttcttcaaacccgacagcgtgagagatctgccgaccaaagtgcaggtggaattctttgagcccttctgggatagtggagagccccgggctggggagaagggagcccggggctggagagcgtggatgcaccagcaggagcgcggtggctgggtggtcatcaacccagatgaggaggaggatgagccggaagaggacgaccaggagataaaggataagactctgcccaggtggcgaatctggcttgctgcggagcgttcccgagaccacaggcattggcggccctggcgccctgataagagcaagaagcagacagaggacgactgtgaggaccctgagagacaggtgctgtttgatgacgttggacagtctctcatcagactctgcagtcccgatcttcagttccgacttgtggaggcctttctgcaggtcctgggtgtgccttctggcttcacgcctcccgcctcctgcctttacctggctctggacgagaacagcatctttgagaacgggctttatgatgaaaagcccttgacgtccttcagccctttgttttctggtgtcagcagcgttggccggatggacccgctgggctgtcggcggtggaccaggggtcacggtcgagagggcgaggacttcatccgcaacatcttccacctcgtgatgcctttgttttcaggcaaggaaaagtctcagctctgcttctcctggctgcagtacgagattgccaaggtcatttggtgtcttcacactaaaaataagaagagattaaaatcacaggggaaaaactgcaaaaaactagccaagaatctccttaaggagccagaaaaccgcaacaacttttgcctctggaagcagtatgcgcatctggagtggttgcttggcaacaccgaggactccaggaaagttttcgatacggcgctcagcttggtgggaagcagagacctgaaggaccatgaactctgtgagcttagcctgctctatgcccaactggaggtggagacggagctgtcaccagactccacggggtccgccacggcccgagctgtccacgtattaacccgactgaccgagagcagtccctacgcgccctacacggggcaggtgttggctgtgcacattctgaaggcccggaaggcttatgagcacgcgctgcaggacagcctgagtgagagctgtggccccactccagcgcctgtcccttctgtcagttgcctgatcagcttggtcaggtgctttatgctcttccagtatttgactgtagggattgacgctgccgtgcgggtatacgagcaggtgtttgccaaactgaaagagtgtgttttcccggaaggctctggcctggaggacagagcgggctccccgagtctgagcggagccctggaagcggtcaccctgatgcacacgagtctgctgcagttccacatgcgagtcagcgtttaccctctggctcctctgcgagaggcactctcagaggctttacagctgtatcctggcaaccaggttctttggaggtcatatgtgcaggtgcaaaataagtcccacagtgccagcaagactagaaggttcttcgctgcaatcaccaggtctgccaaacccttggagccttggctgtttgcaattgaagctgagaagacgaggcgaaggctggtagagacggtccagagggtaggtggtggagaggtccactccacgatccccgagactggcctgacgcaccggatcacggccctgttcgagaatgcgctgcggcgtgatgatggcagccagtgccccctactgtggaggatgtatttgaactttttggtctccttaggaaatacagacagaagtaaaggtgtgttctacagagcacttcagaagtgcccgtgggcaaaggccttgtacctggacgctgtggagcacttccccaatgccatgcaggaggtgctggacctgatgaccgagaaggagctgcgtgtgcgcctgccgctggaggagctcgagctgctgctggaggaacagcgcactggagggtcctggcctgtggcaggtgcgtggaacagttctcattgatccctgagccgcacttggtgacgctgacctctggggaccagcagtgccgccgggaggagcagtgcatgctgtctgcccgccccagctgtgctcaatcaggatccgccccgacagtgttggcacctctgggacaaggatggctgtgcctgggggaggagctgccaccaccttctgtgccgtgtcccag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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