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2025-12-08 09:45:42, GGRNA.v2 : RefSeq release 232 (Sep, 2025)

LOCUS       XR_009816063            3396 bp    RNA     linear   VRT 04-APR-2025
DEFINITION  PREDICTED: Nerophis lumbriciformis dicer 1, ribonuclease type III
            (dicer1), transcript variant X2, misc_RNA.
ACCESSION   XR_009816063
VERSION     XR_009816063.1
DBLINK      BioProject: PRJNA1054156
KEYWORDS    RefSeq.
SOURCE      Nerophis lumbriciformis (worm pipefish)
  ORGANISM  Nerophis lumbriciformis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei;
            Syngnathidae; Nerophis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_084555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033978685.3-RS_2025_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/03/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3396
                     /organism="Nerophis lumbriciformis"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:546530"
                     /linkage_group="LG08"
     gene            1..3396
                     /gene="dicer1"
                     /note="dicer 1, ribonuclease type III; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:133611887"
     misc_RNA        1..3396
                     /gene="dicer1"
                     /product="dicer 1, ribonuclease type III, transcript
                     variant X2"
                     /db_xref="GeneID:133611887"
ORIGIN      
aacgggcgcaatttacgttagcgttttgggtttgcagctaaggcccaggtgaggggaagtgctcctatcgcggagtacaagccacacaaacccggcgagcggagaacatgaaataccagacgttgaaataaaaacaccgtcgatcaactgaataagtacaatcagagctgaacaaatttgtctaagacccaaccatttgaagatgtggaaaggtttgttcttttgcagagaagcctgaggcagtactacataggttgcatcatgaattttctcctaatccaggtctccactacaactcttttgacattgtgaaagagaccatggtatgaaatgaaataaagtggacgacgggaggagctctgcccactcatctccacctctttaaagcatggcaggcctgcagcttgtcacccctgccacgtctcccatggggcctttttttggccttccatggcaacaagaggcgattcacgatgacatctatacacctagaaaatatcaggtagaacttctagaagcagctcttgagcataatactattgtctgcttgaacaccggctcagggaagacctttattgcagttctccttacaaaggagctctctcaccaaatccgtggacagtaccaaggaaatgcaagaaggacggtgtttcttgtggactcagccttgtctgttgttcagcaagcggctgcggtcaggactcactcggacctccaggtgggagagtatacagatttagaggagacctcaaaatggtcttaccagcattggaaggaagagataatcaacaatcaggtactggttatgacttgccatatattcttgcacgtactgaagagacaaatattaccattgtcaaaaatcaacctggtggtttttgatgattgtcatcttgccatcaccgatcacccctactgtgagataatgaagctctttgacgacagcttgtgcaatcctcgtattttgggtctcactgccgcaattctgaatggaaagtgtgatccatcagatcttgaacacaaaatccagaatttagagcaagtcctgaagagcaacgctgaaactgccacggatcttgtagttcttgacagatatgcctctcagcccagagaagttgttttagactgcggtccctatgtggataagactgggctgtctactcgtcttcaagtggagttggacgaagctctccacttcttagatgactgtaacgtttctgttttaagggaagatcgggaccctacagcaatctccagacaggtcctaagtgattgcagggctgtgctgcaggtgctggggccctggtgtgcagataaagcagcaggtatcatggtgcgcgagctccagaagtacatcaagcatgaactgggaggactgaaccgcaagtttctcctcttcaccgacacaattctacgaaaagtacatgcactttgtgaggagcatttctccccttcctccttggacctcaagtttgtcacaccaaaggttctccgtctgttggagatcttgcatgaatacaaaccctttgaacggcagcagtttgaaagtgtggagtggtacaacaaccgtaaccaggacaactatgtgtcttggagtgactctgaggacgaggacgaggacgaagaggtggagaccaaagagaggcccgaagccaactttccgtcaccgttcaccaacatactgtgtggaattatctttgtggagaggcgatacacagcagtcgtcctcaatcgtctgatcaaagaggccgggaagcaggatccagaacttgcttacatcagcaacaacttcattagtggccatagcattggcaagaaccagccacgaaacaagcaaatggaggtggaattcaggaagcaagaagaggttcttcgcaaattccgagctcatgaaactaacctgctgattgccaccagcattgtggaggaaggtgtcgacattccaaagtgtaacttggtggtacgctttgacttgccaacggagtacaggtcctacgtccagtcgaaaggcagagctcgagcgcctgtttccaactacattatgctggctgatagtgacaagaccaaaagctttgaagaagatctcactacctacaaggccattgaaaagatcttgaggaacaagtgctccaagtctgtggaggttggtgagtttgacgtagagcatgtgtttgatgacgacaacatcctcccaccatacgtgcttcgatccgaggatggaggtccgcgggtcaccataaacacagctattggacacatcaacaggtattgtgctcggctgccaagtgatccatttacacatttagcacccaagtgtaaaactacagagacccaagacggacgattccagtccacactttatttacccatcaactccccactcagagtgcctgtgaagggtccaaaaatgaattgtgccaggttggcagagaaggccgttgcactattgtgttgtgagaaactccacagaataggtgagctggacgatcatttgatgccagtggggaaggagactgtcaagtatgaggaagagctggaccttcatgatgaggaggagacaagcgttcctggcaggcctggctccacaaagaggaggcagtgttatcctaaagctataccagagtgtctgcgagacagttatgctgtacctgagcatacttactacctgtacgtgattggcatggtcctcaccaccccgctgcccgatgaactcaactttcgccgaaggaagctttacccgccagaggacaccaccaggtgcttcggtatcctgacagccaaacccataccgcgaatcccacatttcccggtgtacacgcgctccggtgaggtgaccatctccatcgaacttcaaaagtctggcttcacccttgccactgcccagcttgacctcatcacgcgcctgcaccagtacatcttctcccacatcctgcgcttggagaagcctgcattggagttcaagcccatatttgctgattctgcttactgtgttctacctctcaatgtcgttggaaattcggacacacttgatatggatttcaagttcatggaagaaattgaaaggtctgaggctcgaactggcattcctacaactcagtacaccaaacagaacccattcactttcaagttggaggactaccaggatgctgtcatcattccgagacctcacacctctcagcaagttcccttcaccagaatatgagacgttcgctgagtactacaaaaccaagtacaacttggacttgtccaacctgaaccaaccactcctggatgtagaccacacctcatccagacttaacctgttaacccctcgtcacctgaaccaaaagggtaaagcactgccgctcagcagtgcagagaagagaaaggcaaaatgggaaagtctgcagaacaaac
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]