2024-09-18 11:30:28, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS XR_009355766 7150 bp RNA linear MAM 23-AUG-2023 DEFINITION PREDICTED: Mustela lutreola NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, misc_RNA. ACCESSION XR_009355766 VERSION XR_009355766.1 DBLINK BioProject: PRJNA1006319 KEYWORDS RefSeq. SOURCE Mustela lutreola (European mink) ORGANISM Mustela lutreola Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081296) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030435805.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/17/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7150 /organism="Mustela lutreola" /mol_type="transcribed RNA" /isolate="mMusLut2" /isolation_source="Germany" /db_xref="taxon:9666" /chromosome="7" /sex="male" /tissue_type="blood" /dev_stage="adult" /geo_loc_name="Germany" /lat_lon="51.1657 N 10.4515 E" /collection_date="2022-03-14" /collected_by="Jakub Skorupski" gene 1..7150 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:131836773" misc_RNA 1..7150 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:131836773" ORIGIN
ttcccagagtgcaccgcgggcgcgaaggcctcactgtcggcgagcgttctccggcgccatttctgtagaggggaacggcagtgcggcctgtaatcatggcgctgttcccggcttttgcgggcattggtgaggctcccagtagcggcagcgccaggaaagaattagattggctgagcaacccgagcttttgtgctggagccgtaacctctctgagccaacagcctgaggaggccaccaccctggtttctgaagggtcatcgccgacgaggagtcctctgaaatcagagacttcagatgaaagtgacgctaacagaaagcccagacaaacaagcaggaaaaagaagaaagagaagaagaagaagaggaagcatcaccacaagaaaaccaagagaaaacgtgggcaggctagtagcagtggctctgagccggatagtgagcctgaaaaggacaaaacttccagaagcactggagacagtagaagggaatccgagaagccaaggcaagaaagtcatgctgctgctgatgttgggcatcgctttgtttggcttgaggacgtgcaggctctgacaggagaaaccttcagaacagacaagaaaccggatccggccaactgggagtataagtctctctaccgaggagacatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgtatatcctgggagggggcttccacagaaaagaagcattcgcacaagcatgttgagcgctattttacgaagaagagcgtgggattgatgaacattgatggagttgccgtcggcagcaaaaccgaacctccgtcatctgagccgctctcctttatccccgtgaagggcccagatgatgcgcttcctcctgttacaacctggttgaaccctctgggcatttacgatcagtccaccacgcagtggttacaaggacagggtccttcagagcaagaatcaaagcagccagactcagagatggatagagagagcgcgctgctcaaggccaaggtggaggagttcaaccggagagtgcgcgagagtcctcgcgacgtgcagctgtggatggcctttgttgcttttcaggatgaggtcatgaaaagccccggcctgtacgccctcgaggagggagagccagagaagcggaagaggtctcggaagctggtgctggaccggaagctggccatcctggagcgggccatcgagagcaaccagagctccgtggagctgcagctggccaagctggagctgtgtgctgagttctgggagccctctgcgctgctcagggagtggcagaagctgatattcgtgcaccccaacaagacggccctgtggcagaagtaccttttattttgccaaagccagttcagcaccttcactgtcgccaagatccacggtctctatggcaagtgcttgagcacgctgtccgcggtgctagacggcagcatcctgtcacaccccgtgctgccgggcaccgaggaggcggtgttcgctctctttcttcagcactgccacttcctgcggcaggctggccactcggagaaggccgtcgctctgttccaggccatggtggacttcaccttcttcaaacctgacagcgtgaaagacctgcctaccaaaggacaggtggagttctttgagcccttctgggacagcggggagccccgggctggggagaagggcgcccgcggctggagagcgtggatgcagcagcaggagcgaggcggctgggtggtcatcagtccagatgatgacgatgatgagccagaagacgaggaccaggaaatccgagataagagtctgcccaggtggcaaatctggcttgccgctgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaggaagcaaaccgaggaagactgtgaggaccccgagagacaggtgctgttcgatgacatcgcacagtctctgatccagctctccagaccggatcttcagttccagctggtcacagcctttctgcagttcctgggtgtgccttgtggcttcagcaccccggcctcctgcgtctacttggccatggatgagaacagcatcttcgataacgggcttcatgatgaaaagccattgactttcctcaacctctccttcaatggcatcagctgtgttggccgctcagaccccctgggctgccgtcgctggacccgaggtcacagtcgagagggcgaggagttcatccgcaatgtctttcaccttgtgatgcctctgttttcaggccaggagaggtcccagctctgcttctcctggctacggtgtttttctaggatggactcttctgccctctgctggccactggtcatttggtgtctgcacactaaaaacaagaagaggttaaagtcccaaggaaagaactgcaaaaaactcgccaaaaatctccttaaggagccagaaaaccgcaacgatttctgcctctggaagcagtatgcacatctggagtggctgctcggcaacacggaggacgccaggaaggtgttcgacacggcgctcagcctggcgggcggcggggaaccgagggggtccgagctctgggagctcggcctcctctacgcgcagctggagctggagctggagctctcggccgatgtgagggggaccaccgcggcccgggccgtgcacgtactgaccagactgacggagaatgggccctatgggccctactcggggccggtctcggccgttcatgtcctgaaagcccggaaggcttacgagcacgcgctgcaggactgcctggggcagagctgtggctccgcttcagctcccgccggccccgctcactgcctcgcgagcctggccaagtgcttcctgctcttccagtatgtgactgtaggcatcgaggcggctgtgcggctctacgagcaggtgtgtgcggggctgcggggctcggtgtgcccgggcggcgtactcgaggctgtcacgctgctgcacacgggcttgctccggttccacaccagggtccacgtttaccccctggctcccctgcgccaggcgctctcagaggcgatacagctgtacccagacaaccagcttctctggagggcctacatacaggttcagagcaagtcccacgcagccagtaagaccagaaggttcttcgatgctgttaccaggtccgccaaagccttggagccttggttgttcgcgattgaagctgagaaaatgaggaagaggctggtggagaccgttcagagggtggatggcagagagatccatgccacgattcccgagaccggcttggctcatcggatcagagccctgtttgaaagcacgttgcagagtgaccatggccgcctgtgccctttgctgtggagaatgtatttgaactttttggtttccttgggaaacaaagaaaggagcaaaggcgtgttctacaaagctcttcagaattgtccttgggcaaaggcgctgtacttggatgccgtggagcacttccccgaagagatgcaggaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcccctggaggagctggcgcttctgctggaggactagagaccaggagggaatgggccctgccttccaggcctcgtcgcctgccctgccggagctgggatgcacgagattggggatgcctggaaaaaacagtgttgtggaacagaaatctgggctagaaagagctggaaaagaagggtgacaagtcagagcccctgaggaaggtggctggccagccagccaagtggacacttaccttgccgggcttggacacatgtgcttggacacggacctgctctgaaaggagagaagggcaagacagacagggaagaggaagctttgatatggttttgagcatcctggagagagatgaggtttcggaacctgagaacaagggatgacctgggtggcgagcggcagacgtcagcccgggcctgtggagattcctagtaggaacactacggctgctttcctgcctgagtgctgagaaacccgcaggctccacagaccttccaatacggaaagatgtttccttccaaagccacagccacactcttccactgcagagaccgctggctctgtgtcacgtcctcccactagctgctgtccagctctgccaccggctctgggcacgtgaggcagggccagaggtgctgaaagcccccctactgcccaggtccccctgcttattgctgctgagcgccgggtgtggaggttccagaaacgaatgtgagaaggagcacgctttattggagacagagcactgcatgggaccaacaggtgaaggcggcctggggggcatcctacacgctcaaaaaagtacacaaggaggttctgctagtaagaaagatcaactggaacatgggttcctctgggcaacttccccaaactcatcccttcaaggggtcagaacaaccccgaccacttccttgaaggcagctgtggtcggctagagatatagtccctcaggggtgccttcttgttttttataaagaacattttctttagatttcttgaagtcttcatttgttactttcattctgcgttctctcaaggccatcagaccagcttctgtacagattgcctgtaagaacgaacagtatgttcagaaagggaaatactttttacttgtgctctatcaattcaggagctgcttgaaatcgggtgtaagacgcttagactaaagaaactgcttaaaccgtttgggaaaagagtagatcttttcaatgttttacacattctaattactttctcagggtctgaggtggctttgaggaggaggaggcctggctcaggttctaaccagcaggatggcccaatggggaagttctctgctccacttgttacaggagccacgttccttcctgggcaccagatgcaactacaccaggacactagcagcaacagagaatccatccagttcatttacccacagtccaaagagaacacgtatcatgtattctggctcgctgtctcaggacagcatttactgggatttatttccttagtcatcacttgccaaaagcaaaacaaaaaacccattcaacatgatgtgacagaaacacaatcctggcattgaagtttttatctggttatggccctcaggatatttcagatggttcagcagaaaagaaagtgtatttgtgaacaaaagataaagtatagcactaaaacggtaacattggataaatcaaggtgatgggtatactagtacttactaatgttgcaacttttctgaagacttcaaatttttcaaaatacaaagtcggtacaaaattttaatataatttccattttaaaaagagctttttattcaccaacacagacactaacccagttctttagagaccaaggatacacagctcagtgcaggcagcagtgtgaaaaggccccacatgtgccgtcctgccctgaccatggtacttagacctgacaaaagcccagatcctcagctaaagagcaggctggacccagatctggtgctgccagcctcctcccacccctgccccatgaaactgagaggtacgacccagcccaggttctcaccttgatatcagcacccgagaggtcatctttagccatgatcaagtcgtccagggtcacatcatcggccagcgtcatcctgcttgtgtggatttgaaagatgcgcttcttagtcttctcatcgggcagggggaactcaatcttcctgtcgatgcgacctgtgggtagaaaaggtttccagtcacatcgctgcacagcccccaggtgtggctccagctcaggaagagtctgagccgtgtcctcactcacgctgtttcggtcagacagcaccctgtgtgtgtgtgtgggggggggtccaaatcccgaaaggtgaacatccctcttgtagttgtaaatgtcggcatttgaattcatccaatctgaaagagatccgctctgctggggtacccttagaaataaagaaagggctcctgaatgacctacgtagtgaaaaaggacagattgtgttaaaaagcataaacaaattagccactgctgcatcctggtgggacctgaatgtaaaaaaatgaacctgagttaacatatgaattattttcagagaaaatatccattatgggaaagaaaagatcacaatttaagattagaagggctacacccactgcatcacgtccttccttaaccacaacctcaggggatgaggtctttagtaagttactctgcatttcacgcgtttgccttgatacttatctttttttttttaaaggttttatttatttgacagatcacaagtagacagagaggcaggcgggggcagggggagaagcaggctccccgctgagccgagagcctgacgcagggcctcatcccaggaccctgagaccatgacctgagctgaaggcagaggctcaaaccactgagccacccaggcgccctgataacacattgttcttaaatcccctgctcatgcacttaaacggtcatccatagacacaacagctatccctggtagaacaagcaaactgacctggtctgataagagctggatccaaagtctctattcggtttgtggccatgataactttcacgtcacccctcgaatcaaatccatccaactggttcagcagctccagcattgttcgttgaatttctctctcaccaccagaatttgagtcatacctttgaaaaagaagagaaggcgtgaaaacctaactgatctgctgaaggataactcagacgtcctcaattctagcgacaaaatcacgccctcccatcatgttgtttaaattgtagaagttttatgcctgagattttatcattaattcagtctccgtgtgcctgaagtccagatcatgatgcctggctccgagcagatgctcgggacactgctctggactaatctccaggcagtcacaactgcatgactgttaacctggcacctgggagagcagagcctaaagcatccagagtaccatgggacggtaggaactatggcaaacccacaggcaggccatccagggggtactcaatgatcgttctcagagaagagctctggggcttttatctctgctcaacacagaaagagaaatgtacctttttgttccaatggcatcaatttcatcaataaacacaatggatggtgcgtgttc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]