2024-09-08 11:36:41, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS XR_008493828 3747 bp RNA linear PRI 08-MAR-2024 DEFINITION PREDICTED: Pongo pygmaeus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, misc_RNA. ACCESSION XR_008493828 VERSION XR_008493828.2 DBLINK BioProject: PRJNA945458 KEYWORDS RefSeq. SOURCE Pongo pygmaeus (Bornean orangutan) ORGANISM Pongo pygmaeus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_072388) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 8, 2024 this sequence version replaced XR_008493828.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_028885625.2-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/27/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3747 /organism="Pongo pygmaeus" /mol_type="transcribed RNA" /isolate="AG05252" /db_xref="taxon:9600" /chromosome="15" /sex="male" /tissue_type="fibroblast" gene 1..3747 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 long SRA reads, 1 Protein" /db_xref="GeneID:129013329" misc_RNA 1..3747 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X2" /db_xref="GeneID:129013329" ORIGIN
cctcctctctgggccgcccctcccgcttcggggtcaagccccagagagcgccgcgaaaaccacatttcccagagtgcaccgcgacggcaggggtcctcagaccggcgctcgctcgccggcgccatctctatagagaagaacggcggggcggcctgtggtcatggcgctgttcccagcgtttgcggggcttagtgaggctcccgatggcgggagctccagaaaagagttagactggctgagcaacccgagcttttgtgttggatccataacgtccctgagccaacaaactgaagcagccccagcccatgtttctgaagggtcaccgctgacaaggagtcatctgaaatcagagtcttcagatgaaagtgacactaacaaaaagctcaaacaaacaagcagaaaaaagaagaaagagaaaaagaaaaaaaggaagcgtcagtatcataagaaaacaaagaggaagcatgggccgtcgagtagcagcaggtctgagacagacaccgattctgaaaaggacaaaccttccagaggcgtcggaggcagtaaaaaggaatctgagaaaccgaatcaaggaaataatgctgcagctgatactggacatcgctttgtttggcttgaggacattcaggctgtgatgggagaaaccttcagaacagataagaaaccagatcctgcgaactgggagtacaagtctctctaccgaggggatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgcatatcttgggaagggacttccacagagaagaagcattcacgcaagcaggttgaacgctattttactaagaagagtgtgggattaatgaacatcgatggagttgccattagcagtaaaactgaacctccctcatctgagcccatctcctttataccagtgaaggacttggaagatgcggctcctgttacaacctggttgaatcctctggggatttatgatcagtcaaccacacagtggctacaaggacagggtcctccagagcaggaatcaaagcagccagacgcacagccaggcagcgagagtgcggctctcaaagccaaggtggaggagtttaacaggagggtgcgggagaatcctcgggatacgcagctgtggatggcattcgttgcttttcaggacgaggtcatgaaaagtcctggcctgtatgccatcgaggaaggagagcaggaaaagcgaaagaggtccctgaagctcattctggagaagaagctggccattctggagcgggccattgagagcaaccagagcagtgtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccactctggtcaaagagtggcagaaactgatatttttgcatcccaataatacagccctttggcagaaataccttttattttgccagagccagtttagtaccttttcgatatcaaaaattcacagtctttatggaaaatgcttgagcactttgtctgctgttaaggatggcagcatcttatctcaccctgcgttgcctggcacggaagaggccatgtttgcactctttcttcagcagtgccactttctgcggcaggctggccactctgagaagtccgtctcattgttccaggccatggtggacttcaccttcttcaaacctgacagcgtgaaagatctgcctaccaaaggacaggtggaattctttgagcccttttgggacagtggagagccccgggctggggagaagggagcccgaggctggaaggcgtggatgcaccagcaggaacgaggtggctgggtggtcatcaacccagatgaggatgacgatgaaccagaagaggatgaccaggaaataaaagataagactctgcccaggtggcagatctggcttgctgctgagcgttcccgtgaccagaggcactggcagccctggcgtcctgataagaccaagaagcaaaccgaggaagactgtgaggatcccgagagacaggtgttgtttgatgatattgggcagtctttgatcagactttgcagccacgatcttcagttccagctggtggaggccttcctgcagttcttgggtgtgccttctggctttactcctccagcctcctgtctttatctggccatggatgagaacagcatctttgataatggactttatgatgaaaagcccttgacttttttcaacccttcattttctggggctagctgtgttggccgcatggataggttaggctgtcctcgctggaccaggggtcagaaccgagagggcgaggagttcatccgcaatgtcttccaccttgtcatgcctttgttttcaggcaaagagaagtcccagctctgcttctcctggttacagtatgagattgcaaaggtcatttggtgcctgcaccctaaaaacaagaagagattaaagtcacaagggaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaactgcaacaacttttgcctgtggaagcagtatgcacatctggagtggttgcttggcaacacagaggatgctagaaaagtttttgacacagcactcggcatggcaggaagcagagaactgaaagactctgacctctgtgagctcagtctgctctatgctgagctggaggtggagctgtcgccagaagtgagaggggccgccacagcccgagctgttcacatattaaccaagctgactgagagcagcccctatgggccctacgctggacaggtgtcggctgttcgcattttgaaagcgcgaaaggcttacgagcacgcgctgcaggactgtttgggtgacagctgtgtctctgatccagctcccaccgattcctgtagccgcctaattagcctggctaaatgcttcatgctcttccagtatttgaccatagggattgatgctgctgtgcggatatacgaacaggtgtttgcaaaactgaacagttctgttttcccagaaggctctggcgagggggacagtgccagctcccagagttggaccagtgttctcgaagccatcacactgatgcacacgagcctgctgagattccacatgaaagtgagtgtttacccgctggcccctctgcgagaggcactctcacaggctttaaagttgtatccaggcaaccaggttctttggaggtcctatgtacagattcagaataagtcccacagtgccagcaagaccaggagattttttgacacaatcaccaggtctgccaaacccttggagccttggttgtttgcaattgaagctgagaaactgaggaagagactggtggaaaccgtccagaggttagacggtagagagatccacgccacaattcccgagaccggcttaatgcatcggatccaagccctgtttgaaaatgccatgcgcagcgacagtggcagccagtgccccttgctgtggaggatgtatttgaattttctgcctcatctcaccgacactccttggtttcaagcactgttactaacccccagacgtgacagcctacagcaaaggaggagatccgggactttaaaaagtcagtagtgttcaggattgacactccggggccatttcaatgggaggaaacaaccccaacacagcagtggcttctgagagtgctccctggcgcctgcccctgtcccacggccaccgtgacggtgccaggccctctgcacaggtttccttaggaaataaagaaagaagcaaaggtgtattctacaaagcacttcaga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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