2025-06-17 14:06:18, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XR_008234542 3402 bp RNA linear VRT 26-FEB-2023 DEFINITION PREDICTED: Harpia harpyja NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X6, misc_RNA. ACCESSION XR_008234542 VERSION XR_008234542.1 DBLINK BioProject: PRJNA910140 KEYWORDS RefSeq. SOURCE Harpia harpyja (harpy eagle) ORGANISM Harpia harpyja Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Harpia. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_068942) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_026419915.1-RS_2023_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/25/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3402 /organism="Harpia harpyja" /mol_type="transcribed RNA" /isolate="bHarHar1" /db_xref="taxon:202280" /chromosome="3" /sex="female" /tissue_type="blood" /dev_stage="adult" /geo_loc_name="Brazil: Sao Jose do Laguinho / / Gleba Vila Amazonia in the municipality of Parintins" /lat_lon="2.625833 S 56.649722 W" /collection_date="2002-06-24" /collected_by="Tomas Hrbek" gene 1..3402 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:128139883" misc_RNA 1..3402 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X6" /db_xref="GeneID:128139883" ORIGIN
agcatgctcggcgccgcggcgccatcttgccccgccgctctgcggggcagttcgggcagatagtagtggcggtaagctgagacatggccctgttcccggcttttgccagtgccaccgagcccggggagcccccaaccggcagcagcgagggctccaggaaagaattggactggcttagtaacccaagcttctctacagaagatgcactattactgcatcagcgtgctacagaagttgcaaatctcatccctgaaaaatcaccactaataagcaggacaacctcaaaatcagagttgtcaggggaaagtgatacagatgagagtctgaaacagtcaagtaagaaaaggaaaaagaaaaagaagaagcatcacaactataagaagacaaaaaagaaaacaaaaggcgactccagtagcagcgaatcggaccgggacactaagcatatcaaggacaaagctgaaggaagtggcagaaatcatgaaaaggaaggagcagcaaatctagataagaaaacatcaaatcttaccagcaatcgctttgtttggcttgatgatatccaggctttcacggcagaaaccttcagaatagacaagaaaccagaccctgcaaactgggcctacaaatccctgtatcgaggggacatagcaagatataagaggagaggagagtcctgtcttggcatagatgcaaagaaacagtgtataacttggggcagctctgcatcaaaaaggaagcaattacagaggcgacctgagcgctatttcacaaagaacaatgtgaagatgctgaacacagatgggattcctgtttgcaataaaagttctccatctgacccaactgcttttataccagttttccaaatggaaactgatgatccttctgacacaacagacatgaatcctcttgggatttatgatccatcaactacagtgtggctacaaggaaaagggtgcaagagtacagaccatgagcctgtaaatatgcagcaaacaattcaagagcctgggataaacattaactccattctaatgacaaaagtggaagaacataacaagaaagtcagagaaaacccaagagatattaatgcttggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccttatgccagtaaaggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaaactggctattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaacttgccaggctgaagctttgcacagaattctgggaaccaccagctttaatcaaagaatggcagaagctaattttcttacatcccaataatccagagctgtggaagaaatatctcctgttctgtcaaagtcagttcactaccttttctgtttcaaaaatcaatagtctctatggaaaatgtttgactacattggcagctgtacaggatggcagcatggtttcacatcctctactgcctggcacagaagaagctatgctagctatatttattcagcagtgccactttctgagacaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagcgtaaaagatctgccaacaaggggacaggtggaattctttgaacccttttgggatagcggtgaaccacgaattggagaaaaaggagcaagaggctggaaggcatggatgcatcaacaagaaaagggtggctggattgctcttaagcctgatgatgatgatgatgatgaagagatagatgaggatcaagaaataaaggataaaagtctccccaagtggcatatttggttggattttgaatattctcgtgaagcaaggcattggttaccttggaggccagacaaaaccaaaaaggaaactgaagaagactgtgaggatccagaaagacaggtattatttgatgatcttggaccatctttaatccagctttctaatccagatcttcaacatcaactactgtactcatttttgcaattcctgggagttccatgtacaagtaaactctttccttccaacctctatattgccatggatgaaaataacatctttgagagtgtgctttctgatgaaaagccactgacttctgttagttttccactttctggattcaacagtattggtcatatggacacgatgctacgagggagacatcacgtaggccactataaagaaggagaggagttcatacagaatgtttttcatgttctattcctgctattttcaggaaaggaaaaatctaacctgtccatttgttggttacagtatgaaatatctaaggtagttcagtgtctcgaagcaaaaaataagaagaaggtgaaagcacaagggaggaagagtaaaaagttggccaagaatctccttaaagaacctgacaaccgaaaccacctatctctctggaaactgtatgcctacctagaatggctgcttggcaacattgatgatgccaggaaggtatttgacacagctctttgcacagcagggacaggaggatgcaagagtccccagctctgcagcctcagtctgctttatgctcagctggaagcagaactactggaaagtacagaaggagccattatatcacgtgctgttcatatattgaccaaattggctgaaagtggaccatatgtgccctatagtggacaagtgttatctgtgaatgtcttgaaagctcgtaaaacatatgagcatgcgctgcaagattatttaagtaaaacaccagtttctgatcaggatcaggtcagtgatgctaatcagctggttaacttggttggttgttatgcactgttccagtatttgactgttgggattgatgctgcagtattaatatatgcacagacttcagaaaaacttgaagctcctggtccacagaaatgtgaaaatactggagagaattttggcattcaaaattttcccactgctcttgaagctatcacactgctgcatacgaatttactcagattccacatgaaaattagtgtttatcctttgaatcccctgcgagaggcactaacggaggctctgaaacggtatcctagcaaccaatctctttggaggtcatacatccacatccaaaggaagtctcacagtgctagcaaagcacgaaggttttttgatggtgtcacaaggtctactaactctttagagccatggctgtttgcaatccaagcagagcagctgagaaaaaaactcactgagaatgtccagaggcttcactaggaaaaaaagaaaaaagtaaaggattgttttataaagcccttcaaaactgtccttgggcaaaggtgctctatatggatgcagtagagtacttccctgatgatctgcaagagacacttgatctaatgac
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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