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2021-12-06 04:25:01, GGRNA.v2 : RefSeq release 208 (Sep, 2021)

LOCUS       XR_005820225            5665 bp    RNA     linear   VRT 08-APR-2021
DEFINITION  PREDICTED: Cygnus olor NRDE-2, necessary for RNA interference,
            domain containing (NRDE2), transcript variant X2, misc_RNA.
ACCESSION   XR_005820225
VERSION     XR_005820225.1
DBLINK      BioProject: PRJNA642912
KEYWORDS    RefSeq.
SOURCE      Cygnus olor (mute swan)
  ORGANISM  Cygnus olor
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes;
            Anatidae; Anserinae; Cygnus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_049173.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Cygnus olor Annotation Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5665
                     /organism="Cygnus olor"
                     /mol_type="transcribed RNA"
                     /isolate="bCygOlo1"
                     /db_xref="taxon:8869"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /country="Germany: Mainau"
                     /lat_lon="50.149850 N 11.063270 E"
                     /collection_date="2015-07-01"
                     /collected_by="Robert Kraus"
     gene            1..5665
                     /gene="NRDE2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 12 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 11 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:121070780"
     misc_RNA        1..5665
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X2"
                     /db_xref="GeneID:121070780"
ORIGIN      
aaactgaatgattttattatgaaatcagtttagtttatttggcatctagaatatcagtatcttgaatgggctttgagtctggtccttaagaaaacaggtaagtaatcaattttctatagaaaagtggtagttttcctagtactgaagtttacagagtgattttttacatatttcattacctacccaaataagattttaacaaatatttccatgaccaggagagttctgactgaactttcccagtagtttagactcgcattaagaactctgtgcacattggagttttcctaccattgaaaaccctgctctagattgccacctgttgtcatgcaatttgcagtaacgtaataatctgtaacatcgtgttaaatttggttgaaattggtcatgagttctaaaactacctggagaaattgtgccaggcagacggaaggacaaatgcttgttcaagtagcataattacataggctttcttttctcaggaaaaaggctagaaattgcacgtgacaagataattctttttgaaattgtctcttcagagtttagtcacaaattggtaatgtgattattttagatttttccttctatcttctgcattggttttaggcagatatatgtttctatatattactcactgcatttacacattctaatgttttacttcaaaacgtgacagatgttaacacacttgaacaaaagcattgctaaacatcattatgtgaacataaattttaaagtcagttctttccaagttggcagtcaggccctgctcttcttaaccacgcacgtttgatgacttccagactatcagtgatgatgactactattttgttctgaatcctcttctccctctgtctcacattcttctcttctgttgttagcaaatgaataatactttatagattaaaaataaattaagggtaggaaacaatgattaagaaagagttttctagttttccaaaggaagaagtcactcagagaattctgtgggatctgacagttcaatgttacaaaaaggctgcaaaaggcagtgaatgtagagttgacgaagtctgcagttggcacaaagtattcaggataatcagctggaaagctgactgagggaggttgcttaagtattgcacaaataaattataaaatgacagaaaaataaataacttagttaatgcaaagtgcttgtgtctagtgtttgtaggaaactaatcctaatagcgatacatatggtaagggagaatcttttgccactcaggaataggctcttaaaagacattgcagctcagaagagtcaaaaagagaaacagaattggtataaggcattgggaaaggagccaaaaccaaaccagtcattataatttcaagtaatacaatacttgcattgtttgtacactacaatgtgtacaaactatgatgtacaagtgtacatcgtttgtacacttgattactacatgaaattctggtcatgcagtggtactattgtatcaggtaaaaaaaacagaaaaattcaacaagggcattgtggaatggttttggtatgcaaagaaaaaaagcaagcttgtctcctcagatgactgaagtatgaaaactgaaatgagttatcataatggtgtataagaccgtgcaggtttttttttgttgttgtttgttttccttacaatgcaagaattaagcttaaggaaaaaaaaaaaaaaaaagaattactattttatacaatatgtaactcaagtgtaacatcctgcccaagtagtcaaaaccataagactgttcattattttcccagttcctttacagagggcatattcgatgattctattaaatgtgaatggtgtccccactggttaggggacttaaaaattgctgattgcaggagtttatttcttccttaagcctgcgctaccgccatttgaggcaggctctctggccagacggaccttcagttgggcttcactcccagtgtggtgcatgagggaaaaacggggtggcaaggaagaaaaggctgcttctgcctatggaaaccccatctccatcttttccccgcgggctgaacagtaatcccctccttcagtcccgtcagcggaggcccggagaatatacgatgcccccagcacaggcaccttcctcgcccagcacccaccgagggccggccgccattttgggagccggggcaggcgaactacatctcccagcaggcccggcgccgcggcgccatcttgccccttcgctccgcggggcagctctggcaggcagcgcgggcgccgagcggggctatggcgctgttcccggcctttgccggtgccgccgagcccggggagaccccagccggcagcagcgagggctccaggaaagacctggactggctgagtaacccaagcttctctacagaagatgcactgttagtgcatcaacgcactacagaagttgcaaattctacccctgaaaaatcaccactaataaggactagttcaagatcagagctgtcaggggaaagtgattcagatgagaatctgaaaaagtcaagtaagaaaaggaaaaagaaaaagaaaaagcatcaccactataagacaaaaaagaaagccaaaggggactccagtagcagcgaatcagacttggacactaagcacgtcaaggacagagctacagcaagtggcagaaatcacgaaaaggaagcagcagcgaatctaggtgatacaacatcaaatcttaccaacaaccgctttgtttggcttgatgatatccaggctttcacagcagaaaccttcaggatagacaagaaatcagatcctgcaaactgggcctacaaatccctgtatcgaggggacattgcaagatataaaaggaaaggagagtcctgtcttggcatagatgcaaagaaacaaagtataacttgggacagtcctgcatcccaaaagaagcaatcacagaggcgacctgagcgctacttctcaaagaacaatgtgaagacattaaacacagatgggattcctgtttgcaataaaagttctccatctgactcagctgcttttataccagttttccaaacggaaagcagtgatccttctgacacaacagaggtaaaccctcttgggatttatgatccatcaactacagtgtggctgcaaggaaaaggatacaaaggtgcagaacatgagcctgtgaatacacagcaggcatttcaggagtctgggataaatgttaaccccgttctaatgacaaaagtggaagaatataacaagaaagtaagagaaaacccaagagatattaatgcttggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccctatgcaagtatgggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaaactagctattttagagagggcaattgaaagcaatccaagtaatgttgacctgaaactcgccaggttgaaggtttgcacagagttctgggaaccaccagctttgatcaaagaatggcagaagctaattttcatacatcccaataacccggaactgtggaagaaatatcttctgttctgtcaaagtcagttcagtaccttttctgtttcaaaaatcaatgggctctacggaaaatgtttgactactctggcagctgtacaggatggcagcatggtgtcacatcctccactgccaggcacagaagaagctatgctagctatatttattcagcaatgccactttctgagacaggctggccattctgagaaagcggtgtctttatttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccaacaaagggacaggtggagttctttgaacccttttgggatagtggagaaccacgaattggagaaaaaggagcaagaggctggagggcatggatgcaccaacaagaaaagggtggctggattgctgttgacaagcctgatgatgatgatgatgaagagatagatgaagatgaagaaataaaggataaaactctccccaagtggcacatttggctggatattgaatattctcgtgaagcaagacattggttaccttggaggccagacaaaaccaaaaagcaaactgaagaagactgtgaagatccagaaagacaggtattatttgatgatcttggaccatctatgatccagctttctaatccagaccttcaacatcaactactgtactcatttttgcaattcctgggagtgccatgtataagtaaactctttcctcccaacctctatattgccatggatgaaaataacatctttgacaatgtactttccgatgaaaagccactgacttctgttgatgtgccactgtctggattcaatagtattggtcatatggacacgatgctaagaggcagacagcatataggccactataaagatggagaggagttcatacagaacgtttttcatgctctatacctgctattttcaggaaaggaaaaatctcacctgtccatttgttggttacagtatgaaatatctaaggtagttcagtgtctccaaacaaaaaacaagaagaagctgaaagcacaagggaggaaaagtaaaaaattggccaagaatctccttaaagcacctgacaaccgaaatgacctttctctctggaaactgtatgcctacctagagtggctgcttggtaacatcgatgatgctaggaaggtatttgacacagctcttagcacagcagagacgggaggattgaagagtcccaagctgtgcagcctcagtctgctttatgctcagctggaagtggaactactgaaaagcctggaaggagctgtcacgtcacgcgctgttcatatattgactaaattgactgaaagtggaccatacgtgccctataatggacaagtgttatctgttaatgtcttgaaagctcgtaagacgtatgagcgtgcagtgcaagattatttaagtaaaacaccagtttctgatcgggatcaggtcggtgagtgtaaccagctggtgaacttg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//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]