ver.2
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Previous release (v1)
2026-06-28 20:08:21, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_005701441 3337 bp RNA linear VRT 25-JUL-2023
DEFINITION PREDICTED: Hirundo rustica NRDE-2, necessary for RNA interference,
domain containing (NRDE2), transcript variant X2, misc_RNA.
ACCESSION XR_005701441
VERSION XR_005701441.2
DBLINK BioProject: PRJNA713843
KEYWORDS RefSeq.
SOURCE Hirundo rustica (Barn swallow)
ORGANISM Hirundo rustica
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
Passeriformes; Sylvioidea; Hirundinidae; Hirundo.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_053455.1) annotated using gene prediction method: Gnomon,
supported by EST evidence.
Also see:
Documentation of NCBI's Annotation Process
On Jul 25, 2023 this sequence version replaced XR_005701441.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_015227805.2-RS_2023_07
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.1
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 07/19/2023
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3337
/organism="Hirundo rustica"
/mol_type="transcribed RNA"
/isolate="bHirRus1"
/db_xref="taxon:43150"
/chromosome="6"
/sex="female"
/tissue_type="muscle"
/dev_stage="adult"
/geo_loc_name="Italy"
/collection_date="22-May-2018"
/collected_by="Giulio Formenti, Nicola Saino"
gene 1..3337
/gene="NRDE2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 6 ESTs, 1 long SRA read"
/db_xref="GeneID:120754445"
misc_RNA 1..3337
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X2"
/db_xref="GeneID:120754445"
ORIGIN
ggcggcggcggcggccgagacatggcgctgttcccggccttcgccggggccgcccagcccggggagccccccgccggcagctccgagggctccacgagagagttagactggcttagtaacccaagcttctctgcagaagatgcactgttactgcaccagcgcactacagaagttgccaatctcgttcctgaaaaatcaccattaacaaggacttcttcaagatctgagttgtcagaggagagtgatacagatgagagtctgaaacagacaagtaagaaaaggaaaaagaaaaagaaaaaacatcaccacaataagaagacaaaaaagaaaaccaaaggggattccagtagcagcgaatcggatgtggacactaagcacaccaaggacaaaggaagtggcaaaaatagtggaaaggaagcagcagcaaatcagggtaagaaagcatcaaatgttaccagcagtcgctctatttggcttgatgatatccaggcccccacagctggcaccttccggatagacaagaaaccagaccctgcaaactgggcctacaaatccttgtaccgtggggacatcgcaaggtataaaaggaaaggagagtcctgtcttggcatagatgcaaaaaaacactgtataacttgggacagttctgcatcaaaaaagaagcgagcacagagtcgacctgagcgctactttacaaagaacaatgtgaagatgctgaacacagatggcattcttgtttgtaataaaaattctccatctgatccacctgcttttataccagtttcccaagtggaaagtgatgattcttcggacacaacagaagtaaatcctcttgggatttatgatccatcaaccacagtgtggctacaaggaaaagggtgcaagagcgcagacaatgagtctgtaaatgcacagcaaacaattcaagagcctgggataaacatgaactccattctaatgtcaaaagtggaagaatataacaagaaagtcagagaaaacccaagagatattaatgcttggatggaatttatttcctttcaggatgaattaatgagaggacctagcccttatgccagtcagggagagcaggaatcaaggagaaaatcactcaagttaatcttggaaaagaaactggccattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaacttgccaggctgaagctttgcgcagaattctgggaaccaccagctttgattaaagaatggcagaagctaatttttttacatcccaataatccggagatgtggaagaaataccttctcttctgtcagagtcagttcaccaccttttccgtttcaaagatcaacagtctctatggaaaatgtttgacaacactggcagctgtccaggatggcagcatggtatcccatcctctgctgcctggcacggaagaagctatgctggctatatttattcagcagtgccactttctgagacaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccaacaaggggacaggtggaattctttgaacccttttgggatagtggagaaccacgaattggagaaaaaggagcaagaggctggaaagcatggatgcaccaacaagaaaagggtggctgggtcgttcttaagcctgatgatgaggacgatgaagatctggatgaggatcaagaaataaaagataaaactcttcccaagtggcatatttggttggatattgaatattcccgtgaggcaaggcactggttaccttggaggccggacaaaaccaaaaaggaaactgaagaagattgtgaagatccagaaagacaggtgttatttgatgatcttggaccatctttaatccgtctttctaatccaaagcttcaacatcaactattgtactcttttttgcaattcctgggagttccatgtacaagtaaactctttccttccagtctctatattgccatggatgaaaataacatctttgacagtgtgctttatgatgataaaccgctgacttctgctgatttcccactttctggattcaacagtattggtcatatggatacaatgtcacgaggcagacatcagataggccactataaagaaggagaggagttcatacagaatgtcttccatgttctgtcccagatatttacaggaaaggaaaaatctaacctggccatttgttggctacagtatgaaatatctaaggtaattcagtgtctccaagcaaaaaagaaaaagaagctaaaagcacaaggcaggaagagtaaaaagttggccaagaatttccttaaagcacctgacaaccgaaacaacctttctctctggaaactctatgcctacctagaatggctgcttggtaacacagatgattccaggaaggtgtttgacacagctcttggcacagcaggggcaggaggattgaagagtgcccagctctgcagcctcagcctgctttacgctcagctggaggtggaactgctagaaagtgtagaaggagctgttacgtctcgggctgttcatatattgaccaaattgactgaaaatggactatatgtgccctacagtggacaagtgttacctgtgaacgtcttgaaagctcgtaaaacatacgagcatgcactgcaagattatttcagtaaagcaccagtttctgatcaggatcaggtcaaggatactgatcagctggttaacctggttggttgttatgcactgttccagtatttgactgttgggattgatgctgcagtattaatatatacacaggcttcagaaaaacttgaagtttctggttcacagaaacatgaaaatcctgtagagaattttggcattttgaattttcccagtgctcttgaagctgtcacactgctgcatacaaatctactgagattccacatgaaaattagtgtttatcctttgaatcccctgcgagaggcactaacggaggctctgaaacggtatcctagcaaccaatctctttggaggtcatacatccacatccaaaggaagtctcacagtgccagcaaagcacgaagattttttgatagtgtcacaaggtctgctaactctttagagccgtggctgtttgcaatccaagcagagcagatgagaaaaaaactcacagagaaggtccagagatgttggtgaaatacattgtactattcctgaaactggattaacaaatcggattgtagctctatttgaacatgcagttcagagtgaaaatggtacccattgtccactgctatggagaatgtatttgaactttatggcttcactagga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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