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2024-04-19 09:18:49, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_005293530            3487 bp    RNA     linear   VRT 10-SEP-2021
DEFINITION  PREDICTED: Dermochelys coriacea NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X3,
            misc_RNA.
ACCESSION   XR_005293530
VERSION     XR_005293530.1
DBLINK      BioProject: PRJNA655518
KEYWORDS    RefSeq.
SOURCE      Dermochelys coriacea (leatherback sea turtle)
  ORGANISM  Dermochelys coriacea
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
            Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_050073.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Dermochelys coriacea Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3487
                     /organism="Dermochelys coriacea"
                     /mol_type="transcribed RNA"
                     /isolate="rDerCor1"
                     /db_xref="taxon:27794"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /country="USA: Half Moon Bay, California"
                     /lat_lon="37.46311 N 122.4293 W"
                     /collection_date="26-Sep-2017"
                     /collected_by="Lisa Komoroske"
     gene            1..3487
                     /gene="NRDE2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 62 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:119857126"
     misc_RNA        1..3487
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X3"
                     /db_xref="GeneID:119857126"
ORIGIN      
actacatttcccagcatgctggggcagcgagcggcgccatcttgcctcgttgggcggcccgggtctcctcgggaagccagaggggaggaagctgtggttcagcccatggctcttttcccggcctttgccggcgccgctgagcccggggagacgccagccagcggtagcgagggctccaggagagaattggactggcttagcaatccaagcttctgcacagaagatgcactgaaactgcaccagcgcactgcaaaggcttcagatcctactcctgagagatcacagtttataagcaggagtccttcaagatcagagctctcaggaggaagtgacaccaatgaagatctaaaaaaatcaactaagaaaaagaaagggaaaaagaaaaagcatcatcaccacaaaaaaagaaaaaagaaagccagagaggaatcaagtaacagtgagtcagacttggacagtgagtgtatgagggataaacctagaggaagtgacacaaaccatgaaagagaagcagcaacactgaagctagaagacataacatcaaatgttgccaccgatcgctttgtttggcttgaggatattcaggctttgacagcagaaaccttcagaaaagataataaacccgaccctgcaaactgggaatacaagtcactgtatcgaggggacatagcaagatacaagcggaaaggggactcatgccttggtattgacctaaagaaacaatgtataacttgggaaagttccatggtagaaaagaaacaatcccccaagcgacctgaacgctacttcacgaagaatagtgtgaagttattgagcacagatggaattccagtttacagtaaaagccaaacttcatctggttcaagcacttttataccagtttcacaactggacagtaatgctcctactaccacaacctgtgtgaatcctcttgggatttatgatccattgaccacactctggttgcaaggaaaaggtcccccagagcatgagactttaaagcagcaggcatcccaagagaccagtgggaatattaactctattctaatggcaaaagtggaagaatataataggatggtcagagaaaatccaagagatgttcacacttggatggaatttgtttcttttcaggatgaaataatgagaggacccagcccttatgccatcaaagagggagagcaagaaataaggagaaaatcattcaagctaatcctagaaaagaaactggccattttagagagagctattgaaagcaacccaaatgatgttgatctgaaacttgccaagctgaagctttgtacagaattctgggaaccatcaactttgatcaaagaatggcagaagctggtttttttgcatcccaataatccagtgctgtggcagaaatatctcttattttgtcaaagtcagttcagtaccttttcagtttcaaaagtccatagtttatatggaaaatgtttgagcactttggcagctgtacaggatggcagcatggtatcacatcctatactgcctggcacagaggaagctatgttagctatctttcttcagcaatgccattttcttagacaggcgggccattctgagaaagctgtgtctttgttccaagccctggttgatttcaccttctttaaacctgacagcgtaaaagatctgccaacaagaggacaggtagagttctttgaaccattttgggatagtggagagcctcggtttggagaaaaaggagcaaaaggctggaaatcatggatgcatcaacaagaaaagggaggctggattatcaccaataaacctgatgatgatgaggaagatgtagatgaagatcaagaaataaaggataaaactctgcccaaatggcaaatttggctggacattgaattttaccgtgaaacaaggcattggctgccttggcgacctgacaaaactaaaaagcagactgaagaagattgtgaagacccggagagacaggtattgtttgatgatcttggaccatctttaatcagactttctagtccagatcttcagtttcagctgctgtactcatttctgcaattcttgggaattccatgtgggtgtagtctctttccttcaaatctctatatcgcgatggatgagaacaacatctttgacactgggcagtctgaaaggccactgacttcttttgacttgctgctttctggagtcaatagtattggccatatggacacaatgaccagagggagacagcacataggacacagtaaggaaggagaggagttcatacagaatgtctttcatttaatattgccgttattttcaggaaaggaaaagtcaaacctttcagtctgttggctacaatatgaaatctcaaaggttggtcagtgtctccaagcaaaaaacaagaagaaactgaagtcacagggaaagaaaagcaaaaaactagccaagaatctccttaaggcatctgaaaaccgaaacaacctttccctctggaaactgtatgcctacttggaatggttacttggcaacacagaagatgctagaaaagtgtttgatacagctctttgcttggcaggaactgaaggaatgagaaatacccaactctgtaatctgagcctgctttatgcttcactggaagtggagctactagagagtctggaggaaactgttatgtcacgtgctgtacatatattgaccaaactggctgaaagtgggccatatgtaccttatcctgggcaagtgttatctgtgaatatcttgaaagctcggaaggcatatgagcatgcgttgcaagattatttaaatgaaagtccagtctttaattgggatcaagccagcagttctaaccaactggttagtttagttggttgttatgcacttttccagtatttgactgttgggattgatgctgctgtattagtatgtagacatatttctgaaaagcttaaaggttctgcttcacggaagtttgaaagtattggagaaaatcttggcattcataatttcccaactgctcttgaagcagtcacactcatgcacacaaatttactcaggtaccatatgaaagttagcatttaccctttaaatccactgcgagaggcactaacggaagctttgaagctgtatcctagcaaccagtctctttggaggtcatatatccagatccaaagcaagtctcacaatgctagcaaagcacgaagattttttgatagtgtcacaaggtctgctaagtccctagagccgtggctgtttgcaatccaagcagaggagatgagaaagaagcttgtcgagaatgttcagagatgttggagaaatatattcaacgattcctgaaactgggttaacaaatcggatcaaagctttatttgaacacgcaattcagagtgaaaacggtgcccattgtccgttgctgtggagaatgtatttgaattttctgttttctctagaagataaagaaaggagcaaaggattgttttataaagcccttcagaactgtccctgggcaaag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]