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2024-04-18 13:34:46, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_005016468            4418 bp    RNA     linear   MAM 28-OCT-2020
DEFINITION  PREDICTED: Balaenoptera musculus uncharacterized LOC118881207
            (LOC118881207), ncRNA.
ACCESSION   XR_005016468
VERSION     XR_005016468.1
DBLINK      BioProject: PRJNA607322
KEYWORDS    RefSeq.
SOURCE      Balaenoptera musculus (blue whale)
  ORGANISM  Balaenoptera musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
            Cetacea; Mysticeti; Balaenopteridae; Balaenoptera.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_045799.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Balaenoptera musculus Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4418
                     /organism="Balaenoptera musculus"
                     /mol_type="transcribed RNA"
                     /isolate="JJ_BM4_2016_0621"
                     /db_xref="taxon:9771"
                     /chromosome="15"
                     /sex="male"
                     /cell_type="Fibroblast"
                     /tissue_type="Epidermis and Blubber"
                     /country="Pacific Ocean: Santa Barbara"
                     /lat_lon="34.41938 N 119.69905 W"
                     /collection_date="2016"
                     /collected_by="Jeff K. Jacobsen, Susanne Meyer, Li-Fang
                     Chu, Jessica Antosiewicz-Bourget"
     gene            1..4418
                     /gene="LOC118881207"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 long SRA read, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 11 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:118881207"
     ncRNA           1..4418
                     /ncRNA_class="lncRNA"
                     /gene="LOC118881207"
                     /product="uncharacterized LOC118881207"
                     /db_xref="GeneID:118881207"
ORIGIN      
tgcgtggacgccagctcagccacccttaggccttggagcccgcgcggatccgggacctgaggtgacctctctgtcccagttggacgagacctcacctcgtccggagaactacggacaaaggcctgaacgggcccggaagaaaagaaatgtcttctggaaatgacttttcgaaatggagttgtttgaccacctctagaggcgacatcaggagccacagaggtccacgtttgtccagtgggttagaggacatggaatggcagacgttgaggaggaagaaaagaaggttctatgccagactggtcacagttagaagacttttccatattagaaccattgttttgtgtgtgcattttattccttactactgtaatgtagttgacaataagtacttttttgaaatatctagcctttctagatgttctgaagtgcctgatatatgttcaaagtagaggtagtaaaaagacattttgtaaatatctttttgttaaaattcgtatgaaatgttgttttggggggaaggggtggccaaaccacctttttgaacagtacgcagtatgcactgtgtttgtgcactggttcaaggtcggggagaggagaaggaagtgcaaagagctctgtgcagtgtgtttatagtgaggcaagattaaccattgtcttttttatgttcctgcattttgtttcactttgctgtgtatatagtgtatataatggacaaatgagtcctaatttacaacacctagtctttctagatgttaaagaggttgccagtgtatgacaaaaatagagttagtaaataatacattttgtacattttgtgttaaaatttctaggaaagattgtcttctgaaaatttgagcattatagccctctgggttggaggtgggggagagagagaagggggttggtcttagaatggctagaatgctggtattttgaagacactttcagattataactgttacatgtgtgcagttcgttcaatactgctctgtatatagtggacaaattaagtccttatttgaaacatctagtccatctagatgtttagaagtgcccaacgtatgttaaatgtagagatagtaaaatatcactttgtaaatatctttttgctaaaattcataggaagtactgtctttgggaatgttaaatgttaaaccacctctctgaacagtatactattgtctatacttgttcagtggtttggaggagggagggaaagaattgcaaaaggtaatatgctagtgtgttcatacctggacgttttcatacaaaaccattttttatatgttcattttgttttgctgtgtatatagtgtatataatggacaaattgagccctaattttgcaacatctagtctctagatgttaaaggggttgccagtgtatgacaaagtagttagtaaaattagcacattttgtccactttattgaaattcataggaaagcttgtcttctgtaaatgacttttggatatgaatttgttcaaccatctctaagcgttacacatgcatgtacttgtccactggattggcggcagagagaaggaagtgagggaggaaatggttcaggccaaaatggtcatatttagaagatacctcagattataacccttgttacatgtgtgcaattttatttaacagtgctgtgtacatagtggacaagtaagttcttatatgaaatatctgttctttctagatgtttagaagtgcttgatgtatttaaaagtagttttagtagaataatgcttcttgtaaatagcttttaaaaactgatgggaaatactgtctttggaaatggaattgttaaacctcctctctgaacagtatactctgtgcttgttcattgggtttaaggaggtgggagggaagattgcaaaaggtgttttgctagcagttactagaacattgcaacttacccattgctctatatgtgacatgcattttgtttaactttactgtaaatattttgtatatactggaccaatgggtcccaattttataatatctagtttctagatattaaagaggttgccaatgtatgacaaaagtagagttagtaaactaacacattttgtacactttgtgttaaaattcattgaaaggccgtcttctgaaaaggacctttggaagtgaaattgtaaatcacatctaagtgacacctgtgcctgtacttgcccaatgttggatggatggccgaaaggaggtgctgggagaaatgaagtgttctagattagaatgttcctatgtagaagacactttcagatctaaccattgttacatgtgtgtagtttattcaacactactgtgtatatagtggacaaacttaagtccttatttgaaacatctggtctttctagatgtttagaagtgcacaaagtatgttaaaagtagaggtagtgaagtaacataatttgtagatatatccttttgttaaaatccatatgaaatactgtcttttagaaatggagtgatcaaaatgatcaaaccacctctctgagcagtacacattattttatttgtgctggttcagggagaaagaagaaagtgtaaagggctttataccaagactaaccattgtccggtatgtctctgcgttttgttttacttggctgtgtacatagtgtacataaaggacagaagtccaaatttacaacatctagtcttcctagatgttaaagaggttgccagtgtatgacaaaaatagccgataaatacattgtgtacgctttgtgttaaaattcataggaaagacttctgaaaacaactggaggaagtaaaattgttaaaatcccctctaagcattacagatgcttattattcttgtctgctgggttgatagagatgagaaggggaagcttctaggccagagtgttcctgtttaggagacactttgtgactataccctttgtgtgcagtttcttcagtgctactacatgtatatatagtggacaaacttaaatccgtatttgaaacatctaatctttctagatgtgtaaaagtgcacaacatatgttgaaagtagagagttaaaagtaacacgttttaagtattttttttctgttaattcataggaatggttgtattgggggagtggaaattgttaaacttgagtcttggagagtaagctgactattcactgggtggtggggaggcagggagcagacagggaaggaagtacagagaagggatctgtgcccatgagtctttagacaagttcagattgtctaaccattgttctatttgtgtgttttagttaattgctgtgtattaaagaataagcaagtcctaatgcccaaagtatattaaaagtagaggtagtaaaataaccccttaataaatgcccttttgttggtttttaggaagggctgtgtcttctgggagcgtctatgttaatccacctcttggagctagatacagtcctgtacttagtcgctgatacgctggaggaggggtaagaggaagggtgaagggaagggctcttggctaatatctccatatctagaagacagttttaggttataaccataggtctaaatgtgcatttttgtaaagtaccaatgcttattatggacaaggttcattcattattttgcaacatctaggctttttaggagttctgaggtgacaatgtatgataaaaagtagagctagtgaattaaccaatttgtaaatatctttgttaccattgataaaaaagtagcatcttggacatggaattgttaaaccatctgagaaatgtacaccaggacttgttcattaggttggcagcagaggggcagaaggaagtataaaagggagggaagtatgtggatatgttcctttttatattttgatgataaccattgatgtatgtgcatctcttagctgtactataggaatacattgttaagtaattcaatggaaacatacctccttgctaatactttaatagtttagatcagataatgaatcctcttaaaagcattatactttgggtactgtgttgcattatgtctcatttttaattgaacgttaagggaatgtagtattttaagcataactctgccaatatctttatctagaggcctgttgccatttttgtcttttctgaagtttttgtcgccaagaaaggattacattttttttccttccagattgagttggtgtagtgtatttttggttatcaaaatactcatagctttgggactttgaagtggtaaatattcatgatgtgtgaaaagcatgatacataactgtatgatcttaattacataaaaatggatgcttagttgtgtttaaatacacaaacgagacctagaaggacacatcaaatggtgaactgcttgtgatgatggatgactttgttttttgcttcttgtgttctttggtttcctattatgcacatgttaacttttaagaaataaatgttatattgaaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]