2024-04-23 21:45:51, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_004837353 1929 bp RNA linear INV 14-AUG-2020 DEFINITION PREDICTED: Folsomia candida uncharacterized LOC118439324 (LOC118439324), transcript variant X2, ncRNA. ACCESSION XR_004837353 VERSION XR_004837353.1 DBLINK BioProject: PRJNA397071 KEYWORDS RefSeq. SOURCE Folsomia candida ORGANISM Folsomia candida Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola; Entomobryomorpha; Isotomoidea; Isotomidae; Proisotominae; Folsomia. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019091226.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Folsomia candida Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1929 /organism="Folsomia candida" /mol_type="transcribed RNA" /strain="VU population" /db_xref="taxon:158441" /chromosome="Unknown" /sex="female" /tissue_type="whole body" /dev_stage="adults and juveniles" gene 1..1929 /gene="LOC118439324" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns" /db_xref="GeneID:118439324" ncRNA 1..1929 /ncRNA_class="lncRNA" /gene="LOC118439324" /product="uncharacterized LOC118439324, transcript variant X2" /db_xref="GeneID:118439324" ORIGIN
gacaacactatcttatctacaaactacaaatacctatcctgttgcagttgcatgcatgaataatactggaaaaaatgtattactttccataccccatcccctcaccgtggtacagagagtacagtacacatgcatgcatagagagactaattgctttaggaaatgatgcacaaaacagttcacttgctaaaggaaacactgcacaaataattgattttggactggcatagtgacttgtttgttacaaattaagtacctttttcacagtttttacacactcgtacatataatctaacccgtgtaattatatatgtacctacatacatataaaactaaataatgattaaaatacgtctcatcatgtcacgataacttttattgaggaactatttgctgacataaatcactggccgaccaacaaattttacgagactaatatgttcatatttaatgtaatcaaatgaaggtttactaccaaaaaaaatcaggtggagtcacatatttaatccgtccttgttttaactttgtaatgatttccaaccgaatcggttataatttttcgttgccgtgacattactaaacggtactgttcgttattataccggtattggcacattcatatgtacatacagaactatactccaataattaattattccagataattcgacaccagttttcttagagtatgggattgtaggtcaagggtttcttatcctccacctgctctatttacggtcattatgtacgtacgtatgtacatatacataaaggaaactttcgttaaatgaggcatccctcccaataaagggaactagtataaactagattccgctaggattttactgattgtatgtatgtatataaatttaggtatgtagttttatgtagtctccatgtgaagacgaaaattatttaacttatcaaaatatttatgtacatatgatttttataggtaggtacgtttttatttaactgagtatgatttttataaagatgtctctatttacttacccgcattaaagttatgtatgccgataatcaaaagataaattacaaatattttacaaattgagtggtccactttttccattcagggtatttccatccagaccatacaataaaatcaactcgctttcctcttccatcataaataaataaatacgagcgatgtcaacgtcaactttttaccaagcgaagaccagacatgcatttacgtaacagtctgacaacattttacatgcgccggctgaggaggctgacaaaggacgttaggtgtacgtgactgattccagtctcaaagatgcaaaaatcctgattaacaattcgcagaagaaaccagaaactttcctggtttggaactacttccctattacattaatcactctgtcagtcgtcaatacgttgattaatgtaaatgcatatgtgtatttgcttgcgcatgtaaatataaaaaactgcaatttattcgtggaaatttcttgcatgtctggttcggtttgggtacctgatcctcagcgaaaatacaccatggataaataaatttgcaatataaattcattgtttcctctactactggatgatcagatgtatttaaataattgatatgatatacatatgtagatacgagtatgtaaataaatatatctagtcacgaaatgtatgtattgacaatggacgtacgtaaataaatatgtacatatttgtctcaagaaaaattcagagttaattaaaagttgaagtatttatggcagatttgaggccacatcttcctgggaatttccttatcgatcgtaaatgatttttagtaatcaattttccccctgtgtcgcattcgatcaaaagatttgtaatacttgtagtttgatatgtacatatatacattcatacatgtgtaaatacatatgtaaatgactaataattccactt
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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