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Previous release (v1)
2025-12-16 16:28:52, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_003531978 125 bp RNA linear VRT 11-JAN-2019
DEFINITION PREDICTED: Corapipo altera uncharacterized LOC113960110
(LOC113960110), ncRNA.
ACCESSION XR_003531978
VERSION XR_003531978.1
DBLINK BioProject: PRJNA512899
KEYWORDS RefSeq.
SOURCE Corapipo altera (White-ruffed manakin)
ORGANISM Corapipo altera
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
Passeriformes; Pipridae; Corapipo.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_020885082.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Corapipo altera Annotation Release
100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..125
/organism="Corapipo altera"
/mol_type="transcribed RNA"
/isolate="COAL_440"
/db_xref="taxon:415028"
/chromosome="Unknown"
/sex="female"
/tissue_type="liver and muscle"
/dev_stage="adult"
/geo_loc_name="Costa Rica: Volcan Tenorio National Park"
/lat_lon="10.40 N 85.0 W"
/collection_date="2017"
gene 1..125
/gene="LOC113960110"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments, including 1 sample
with support for all annotated introns"
/db_xref="GeneID:113960110"
ncRNA 1..125
/ncRNA_class="lncRNA"
/gene="LOC113960110"
/product="uncharacterized LOC113960110"
/db_xref="GeneID:113960110"
ORIGIN
aggtgtggattgctgagtgataaactgagaaaatgattcgggctaattaagaggaaacagtgtaaggtcaatatgacctggagagagaaaagaaaaacaaatcgtaaaacttaattgggctccta
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]