2024-03-29 14:23:13, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_003085677 3603 bp RNA linear VRT 24-MAY-2018 DEFINITION PREDICTED: Python bivittatus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X3, misc_RNA. ACCESSION XR_003085677 VERSION XR_003085677.1 DBLINK BioProject: PRJNA238085 KEYWORDS RefSeq. SOURCE Python bivittatus (Burmese python) ORGANISM Python bivittatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006535520.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Python bivittatus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3603 /organism="Python bivittatus" /mol_type="transcribed RNA" /db_xref="taxon:176946" /chromosome="Unknown" /sex="female" /tissue_type="liver" /country="USA: Texas" gene 1..3603 /gene="NRDE2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns" /db_xref="GeneID:103064229" misc_RNA 1..3603 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X3" /db_xref="GeneID:103064229" ORIGIN
cccagtgaaactacatttcccagcatgctcgggaaaagagtccgcgccatcttgtctccttccctcctctgtcgctggaggaggccgcggaagtcgtgattctcgagggtttcgtggcttgtgatggctctttttcctgcctttgccgatgctgctaaagctggagacgtacaagcaagcgaaggctcgaaaagagatttgaactggctgactaatcaaagcttttgcaatgaagatgcactgagattgcaccaaaatgctttagaaattacagactgtgaaccttcactccaaagcagtacagccaccagttttgaactcccaggagaaaatgaagccaacaaatgtttccaagtgtcacctaaaaagagaaagaaaaagaaaaagcaacgagatcacaaaaaaaataaaaagaaaaggagaaaggaatggagcactagtggatctgaatctgaggatgggaaagatgatagaaatattgaaaaaagaggaacagaattgaacttagaagataaaaccacaaatgtgccctatccgtctgtttggcttgatgacattcagggtttgatggcagaaggattcaaaacagataagaagccagatcctgcaaattggcagtataaatcactatatcgaggcaacattgcaaggtataagagacgaagcaacttctgccttggcctccaacctaaggagcaacatatcatttgggagagctcagcagctggaaaaaagtcttcctataagcggccagaacgctacttcacaaaaggtggtcggaagctcctgaacatggatggcatccatgtcagcagtaaaaatcaggattcctcatctggcttagcttcctggataccaattttgcagctagatccagcagagtctccttctataagctgggtaaaccctcttggggtttatgatctgaagaccacactgtggctacaaggaaaaggcccccctgctgaacacagcttaccaaagaagcaagaacttcaagagaacccccagaatgtagactcccctctaatggcaaaggtggaagaatataacagcaaagtcagagagaatcccagggatgtcaaagcatggatggatttggtttcttttcaggatgaactcatgcgacatcccagttgttatgccatcagtgagggagaacaggaaatgagaaggaaatcatccaggctaatattagagaagaagctggctattttggaaagagcgattgaaagcaacccaaatgaagtggacctgaaactagcacggctgaagctttgcacagagttctgggagccatcagctgtggtgaaggaatggcagaaattgattttcttgcacccaaacaacccagccctgtggcagaaatatctcttattctgtcaaagtcagttcagcacctttactgtttccaaaacacatgtcctttatggaaaatgcctgagcacgttatcagctgtatatgatggcagtatggtatcacatcctgcactgccaggcacagaagaagccatgctagccatttttcttcagcaatgccatttccttaggcaggctggccattcagaaaaagctgtgtccctgttccaagccttgcttgactttaccttttttaaaccagataatgtcaaggatctgccaacaagaggacagggggagttctttgaacccttttgggacagcggagagcctcgaattggagaaaagggagctaaaggttggaaggcctggatgcatcaacaagagaagggtggctgggtggtcatcaatccacctgatgaagatgaggaagatgtagaggatgaagaagaaataaaggatagatctctaccaaagtggcaaaactggcttcatattgaacgttcccgggaagcaaggcactggttgccctggcggcctgaaaaaaacaagaaacagtcattagaagattgtgatgatccagagaggcaggtcttatttgatgaccttggaccatcattaataagactttccagtcctgaacttcagtttcaactactctcctcatttttgcaattcttaggagttccatgcagatatagacttttgccttctttcttctatatagcaatggataaaaacaacttctttgacaatgagtacaataaccaaggaactctgacttctttggacatgcctctttttggagttagtagtattggtcatatggactcaatggtccaaggtgagaagcatgtgactcatgctaaggaaggagaacaatttattcagaatctcttccatatgatgctgcccttgttttcaggcaaagacaagtctaacctatgcattttttggcttcagtatgaaatctctaaggtatctcagtatttgaaaatgggaaagaaaaagaaactaaaattgcaaggcaagaaaagcaaaaaattagccaaaaaccttcttaaggcacctgacaacagaaataatatttccctttggcaactgtatgcctacctggagtggttacttggcaatatagaagatgctagaaaggtttttgatacatctctggggatggctggaactactggaattcaaaacccccaattctgtcatcttagccttctttatgctaaactggaagcagaattgctagtaaatctagaaggagctgtggaatcacgtgcaacacacatattgaccaaattggctgaaagggggcattatgttccttatcatgggcaagtattatcagtgaatgttttgaaagctcggaaaacatacgagcacctgcttcaagattgtttaactgaaaactccacttctgatcaagaacatgctagtgattctagtcatctgattggtttggttggttgttacactcttttccagtatttaactcttgggattgactctgcagtgtcagtataccggcaggtttctcaaaagctgaaagaaaatcctgaaaaaaggtttagtggtcaacattttaccacgcctcttgaagccctctccctaatgcatgtcagcttgcttaggttccacatgaaaatgagtgtatatcctttgagtcctcttcgtgaagtactgttagaggttttaaagagatatcccagcaaccagtctctttggagggcgtacgtccagatccaaagcaagtctcacaatgcaagcaaagcccggcgtttttttgatggtgttacaagaactacaaaatcactggagccttggctgttcgcaatccaagcggagcaaataaagaaaaaactaattgaaagtgtccagagggagcccaatggagatgtgtatgcaaccattcctgaaattgggttaacaaatcgaatcaaagctttatttgaacatgcaattgagactgaaaacggtgctcattgtccattgctctggaggctgtatatatgcttcatggtgagaacatcatcatttgccttgcgttctctatctaatcccataggttactttaggagataaggcaaaaagtaaaggtgtattttacagagcgcttcaaaactgtccctgggcaaaagtgctatatatggatgcaatagaatactttccagatgagctgcaagagatccttgatctaattgctgagaaagaactgcgagtgcgggtaccaatagaaga
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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