2024-05-17 11:25:02, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_002330339 1078 bp RNA linear PLN 11-MAY-2017 DEFINITION PREDICTED: Arabidopsis lyrata subsp. lyrata uncharacterized LOC9306824 (LOC9306824), transcript variant X1, ncRNA. ACCESSION XR_002330339 VERSION XR_002330339.1 DBLINK BioProject: PRJNA49545 KEYWORDS RefSeq. SOURCE Arabidopsis lyrata subsp. lyrata ORGANISM Arabidopsis lyrata subsp. lyrata Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003302549.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Arabidopsis lyrata subsp. lyrata Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1078 /organism="Arabidopsis lyrata subsp. lyrata" /mol_type="transcribed RNA" /sub_species="lyrata" /bio_material="NASC:donor number MN47" /db_xref="taxon:81972" /chromosome="Unknown" gene 1..1078 /gene="LOC9306824" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns" /db_xref="GeneID:9306824" ncRNA 1..1078 /ncRNA_class="lncRNA" /gene="LOC9306824" /product="uncharacterized LOC9306824, transcript variant X1" /db_xref="GeneID:9306824" ORIGIN
tctattcctatgatcaatcttattgtgagcatgttctttctcttctgctgatctttgttaaaactgtttcgatccaatcaatcgtatttttatttattttcatgacagttgattataaactattttctcgatcatcggatctttggtctgagatttttatattgctcgatggattgttgattagatctgagttaacttgttgtatgtgatcttaatagttgatttgtgatgtgattgggtaattctggagcagcataacaaatccatagttttcttcttcttgatacataagatggaagctacagatgttaaggctaggtgtattcattgttctggattgactagttgtaagactaaagatggtgtcacaactagtgcaatgggaaaacacatgagaatatgcaaaatgatgcctcgggaactacctgatgatacgttaatatcataaaaggcatccttctggacgtcttgttgatgctaatgaagactacgaagcacgcctgaaggaggaaccagttattgcgttcagtggagaggaaggcaatggtcggtacttggacttgcatgagtacatcaactctaaatttggggaaagggttgaataccgcgataaactgaagttatcgaggcaatacaggaagtatatggaagctctgctagagtacttggtctactttttccagcgaaccgagccgttgcaagatcttgaccggatactttctagccgttgcaagatcttgaccggatactttctagccgttgcaagatcttgaccggatactttctaaggcaatacaggaagtatatggaagctctgctagagtacttggtctactttttccagcgaaccgagccgttgcaagatcttgaccggatactttctaaggtttaagatcctccctttctttatcgttttattgtgttcaccttgtaccttatggattcttatgggcgttttgatctatgcattagtacagaactggtatgttattcgtgcttaagaattttctactagtttcccaagtagaactttgaattttcttagttttaacaactggttgctttgtgagtgttctaa
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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