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Previous release (v1)
2025-11-14 17:45:34, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_001749918 355 bp RNA linear PRI 05-AUG-2025
DEFINITION PREDICTED: Homo sapiens uncharacterized LOC107984620
(LOC107984620), transcript variant X2, ncRNA.
ACCESSION XR_001749918
VERSION XR_001749918.1
DBLINK BioProject: PRJNA168
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_000013.11) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Updated annotation
Annotation Name :: GCF_000001405.40-RS_2025_08
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.4
Annotation Method :: Best-placed RefSeq; Gnomon;
RefSeqFE; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 08/01/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..355
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="13"
gene 1..355
/gene="LOC107984620"
/note="uncharacterized LOC107984620; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 100%
coverage of the annotated genomic feature by RNAseq
alignments, including 1 sample with support for all
annotated introns"
/db_xref="GeneID:107984620"
ncRNA 1..355
/ncRNA_class="lncRNA"
/gene="LOC107984620"
/product="uncharacterized LOC107984620, transcript variant
X2"
/db_xref="GeneID:107984620"
variation 8
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1403589165"
variation 15
/gene="LOC107984620"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1247080532"
variation 17
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:376549944"
variation 23
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886786880"
variation 25
/gene="LOC107984620"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:576545221"
variation 31
/gene="LOC107984620"
/replace="c"
/replace="g"
/db_xref="dbSNP:945101284"
variation 40
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1886786705"
variation 43..47
/gene="LOC107984620"
/replace="gggg"
/replace="ggggg"
/db_xref="dbSNP:1886786517"
variation 43
/gene="LOC107984620"
/replace="c"
/replace="g"
/db_xref="dbSNP:1886786658"
variation 45
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:746144021"
variation 49
/gene="LOC107984620"
/replace="a"
/replace="t"
/db_xref="dbSNP:1325354169"
variation 50
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:1886786418"
variation 51
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:1886786372"
variation 57
/gene="LOC107984620"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:920811932"
variation 60
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886786263"
variation 61
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:555242707"
variation 65
/gene="LOC107984620"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1886786149"
variation 66
/gene="LOC107984620"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1281106820"
variation 75
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:1886786030"
variation 77
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1886785985"
variation 79
/gene="LOC107984620"
/replace="c"
/replace="g"
/db_xref="dbSNP:1324865813"
variation 81
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:934151177"
variation 84
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:779125686"
variation 85
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:976049845"
variation 86
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:962770950"
variation 89
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1886785664"
variation 93
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1566259715"
variation 95
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:1209609625"
variation 103
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1240337098"
variation 106
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1337616138"
variation 117
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1188421389"
variation 118
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:193193149"
variation 120
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:908380768"
variation 122
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:2137624170"
variation 128
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1566258328"
variation 130
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:1886726590"
variation 131
/gene="LOC107984620"
/replace="a"
/replace="t"
/db_xref="dbSNP:573900803"
variation 132
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:1172372262"
variation 133..134
/gene="LOC107984620"
/replace=""
/replace="ag"
/db_xref="dbSNP:1886726415"
variation 133
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1419688536"
variation 134
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:555477924"
variation 136
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1327477664"
variation 139
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1390875521"
variation 142
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:971254711"
variation 144
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886726173"
variation 148
/gene="LOC107984620"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:540361706"
variation 156
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886726085"
variation 157
/gene="LOC107984620"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1023328750"
variation 158
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1886725957"
variation 160
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:991355170"
variation 163
/gene="LOC107984620"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:149879782"
variation 166
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1886725680"
variation 168
/gene="LOC107984620"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:913159745"
variation 169
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:187909151"
variation 173
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:959867580"
variation 178
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:927040305"
variation 182
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:539422050"
variation 189
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1159081922"
variation 191
/gene="LOC107984620"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1313893133"
variation 194..200
/gene="LOC107984620"
/replace="aca"
/replace="acaaaca"
/db_xref="dbSNP:1032599019"
variation 201
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1256621967"
variation 203
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1886725078"
variation 207
/gene="LOC107984620"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:770021326"
variation 208
/gene="LOC107984620"
/replace="c"
/replace="g"
/db_xref="dbSNP:569409896"
variation 209
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:2501328123"
variation 210
/gene="LOC107984620"
/replace="c"
/replace="g"
/db_xref="dbSNP:1285714616"
variation 212
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:370044484"
variation 213
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:897805661"
variation 215
/gene="LOC107984620"
/replace="a"
/replace="t"
/db_xref="dbSNP:1702095623"
variation 219
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:758587365"
variation 223
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1036338227"
variation 226
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:967679289"
variation 231
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1475544668"
variation 232
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886164579"
variation 237
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1318275701"
variation 241
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1216898120"
variation 243
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1008873625"
variation 244
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:1886164419"
variation 250
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:565771403"
variation 252
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886164319"
variation 254
/gene="LOC107984620"
/replace="a"
/replace="t"
/db_xref="dbSNP:1050977850"
variation 258
/gene="LOC107984620"
/replace="a"
/replace="t"
/db_xref="dbSNP:1886164239"
variation 259
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:1886164196"
variation 264
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886164153"
variation 267
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886164090"
variation 275
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:750845523"
variation 277
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886163955"
variation 279
/gene="LOC107984620"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:932479552"
variation 280
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:9600411"
variation 284
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1470458680"
variation 289
/gene="LOC107984620"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:921146980"
variation 292
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1477676824"
variation 294
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1050171150"
variation 295
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886163591"
variation 298
/gene="LOC107984620"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1043848640"
variation 303
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1442028141"
variation 304
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1360177163"
variation 306
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1886163454"
variation 307
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:1886163409"
variation 312
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:1251037246"
variation 314
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:1886162877"
variation 315
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1886162843"
variation 316
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:2501328023"
variation 318
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:1398518454"
variation 319
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1197322103"
variation 320
/gene="LOC107984620"
/replace="a"
/replace="c"
/db_xref="dbSNP:1886162753"
variation 321
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:1886162721"
variation 324
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:1325970516"
variation 325
/gene="LOC107984620"
/replace="c"
/replace="t"
/db_xref="dbSNP:946516618"
variation 326
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:547593665"
variation 330
/gene="LOC107984620"
/replace="c"
/replace="g"
/db_xref="dbSNP:1886162573"
variation 331
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:1272512924"
variation 332
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:2501327999"
variation 335
/gene="LOC107984620"
/replace="c"
/replace="g"
/db_xref="dbSNP:987766074"
variation 347
/gene="LOC107984620"
/replace="a"
/replace="t"
/db_xref="dbSNP:2137599886"
variation 351
/gene="LOC107984620"
/replace="a"
/replace="g"
/db_xref="dbSNP:960368042"
variation 354
/gene="LOC107984620"
/replace="g"
/replace="t"
/db_xref="dbSNP:1593749106"
ORIGIN
gcaagaaggcaaccatgagcaagccaagaagagagccctcaagggggaaccaaaaggctggctggtaccttgatcttggggtttccagcctccagaatgaatcctctggaaacactatggagtgatggagaaagcaccatctggggagtcagatgacctgctctctatcccagctcatcagggagtctctgagacaaacacttaccagagccactcttgatgatagaattggtgatgtgacagccaccaaaggaatgtgacacaaagtagaaatgagacctgagatgtggcctggacctttaccatggaaatgcccataaattgcgtccctattccttaagattttatttaaagt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]