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2024-05-09 08:40:49, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_001458870            4812 bp    RNA     linear   MAM 22-NOV-2019
DEFINITION  PREDICTED: Vicugna pacos uncharacterized LOC107033401
            (LOC107033401), ncRNA.
ACCESSION   XR_001458870
VERSION     XR_001458870.2
DBLINK      BioProject: PRJNA221631
KEYWORDS    RefSeq.
SOURCE      Vicugna pacos (alpaca)
  ORGANISM  Vicugna pacos
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda;
            Camelidae; Vicugna.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_021964196.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Nov 22, 2019 this sequence version replaced XR_001458870.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Vicugna pacos Annotation Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4812
                     /organism="Vicugna pacos"
                     /mol_type="transcribed RNA"
                     /isolate="Carlotta (AHFN-0088)"
                     /db_xref="taxon:30538"
                     /chromosome="19"
                     /map="unlocalized"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="adult"
     gene            1..4812
                     /gene="LOC107033401"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 45 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:107033401"
     ncRNA           1..4812
                     /ncRNA_class="lncRNA"
                     /gene="LOC107033401"
                     /product="uncharacterized LOC107033401"
                     /db_xref="GeneID:107033401"
ORIGIN      
tccggtgcccctcctctctgactagcgaagagaactgccaagtcagttccggcagagcgcggtgagaaacggactgcggctatctctcccgggaccctccaggccctccggcctcaggccggagggtgagctggggggcccggggacaggctgcgggctgtgtcctgcagagccccagagccctcgctgcggccgcccacgggcggggttcagcccttgaagcagcagcgaccctctccccaacccccacctccgagacctaatggcggcggccccttggagcccggacctcgccgacggcgcggtctcttggctgaacgctgcagagcttaggcgaagcctccgccaagctgccgaggacgtggcgcctttgggcgtcgggcgtggcagggcgagaagaatggcggccactggaacgctgcggagggccgttagatcctcgagggcccaagaaggcggttctctatggacaccagcttggccagccttaggccttggggctgcgcagatccgggacctggggtgaccgctcattcccaggcggacgagacctcacctcgtctgggcaacgacggacaaaggccttaacggacccggaagaaatgtcttcaggaaatgacttttttgaaatggaattgtttgacctcctctagaagcgacatcaggagcgacacaggtccacgtttgttctgtgagttagaggacatggagtggaaaaccgtgaagaggaagaaaagaaggttctatgccagactggtcatacttagaagacacttccctatgataaccattgtcttgtgtctgcattttattcctcactactgtatatacagttgacaatgctaagtacttttttgaaatatctagtcttcctagatgttctgaagtgcctgatatatattaaaagtagaggtagtaaaagcattttgtaaatatctttttgttaaaattcacatgaaatattgtttattttggggggggattggccacaccacctctttgaacagtacacactgcgtttgtgcactggttcaaggtagggggaaggagaaggaagtgcaaagagctctgtgccagtgtgttaatagtgacacaaggttaaccattgtcctttttatattcatgcattttgtttcactttgctgtgtatatagtgtatataatggacaaatgagtcctaatttacaacatctagtctttctagatgttaaagaggttgccagtgtatgacaaaaatagagttagtaaactaatacatttttgtacattttgtgttaaaatttctaggaaagactgtcttctgaaaatttgagcattatagtcctctgagttggtggagagagggagggaagggggttggtcttaggctataatgctcatatttcaaagacacttgcagattataactgttacatgtgtgcagtttatttaagactgctctgtatatagtggacaaattaagtccttatttgaaacatctagtccatctagatgtttagaagtgcccgacgtatgttaaatgtagaggtagtaaaatatcgctttgtaaatatctttttgctaaaatttataagaaattctgtgttttgggaatggaatagttaaaccacctctgtgagcagtatattattgtctatacttgttcagtggttcggaggtggtgggagggagggaaagaattgcaaaaggtaatatgctagtttgtacctggacttttacagataaaattattttttgtatgttatgtgcattttgttttgctgtgtaaatagtgtatataatggacatatgagtcctaattttgcaacatctagtctctagatgttaaagaggttgccagtgtatgaaaagtagtaaaattagcacattttgtacactttgtgttgaaattcataggaaagctcatcttctgtaaatgacttttgggtgtgaatttgttcagctacctgtaagcattacacatgcctatacttgtccactgcatggtggtggagagaaggaagtgagggaggaactggttcaggccaaatggtcatatttagaagatacctcagcttacaaccattgttaggtgtgtgcaattttatttaacagtgctgtgtacatagtggatataagttcttatatgaaatatctagtctttctagatacttagaagttcttgatgtatttaaaaagtagtattagtagaatagtgcttcttgtacatagcttttaaaaacttgggaaatactgtctttggaaatggaattgttaaacctctctgaacagcatactctgcttgttcactggcttgagggaggtggaagggaagattgcaaaagatgttttgctagtgtgtactagaaattttgaacttacctattgctttatttgttacatgcattgcatttaactttactgtatatattatgtatatactggacaaatgggtcccaattttataatatctagtctctagatgttaaagaggttgacaatgtatgacaaaagtagagttagtaaactaacacattttgtacactttgtgttaaaattcttcgaaaggctgtcttctgaaaaggacttttgaaaatgaagttgtaaatcgcatctaagtgacacatgtgcctgtactagcccattgctggatgagtgatggaaggagttgggagaaatgaagggttctagactagaatgttcctacagagaagacactttcagatataaccattgttacatgtgtgtagtttattcaacactactgtgtatatagtggacaaactcaagtccttatttgaaacatctagtctttctagatgtttagaagtgcacaaagtatgttaaaagtagaggtagtgaaataacattttgtagatacccttttgttaaaattcatatataatactgtcttttagaaatggaatgatcaaatgatcacctctctgagcagtacacgttattttatttgtgctggtttgaggaggaagaagtgcaaagggctttataccagtacgtttgtagttaggcaagattaaccattgtcccatacgtatgtctgcattttgttttacttagctgtgtatatagtgtacataaaggacaaacgtcccaacttacatctagtcttcctagatgttaaagaggttgccagtgtatgacagaagtagagttagtaaacaaatacattgtgcatactttgtgttcaaattcataggaaaggctgttctggaagatttgatattgttaacatcccctctgagcattacagatgcttattacacttgcccgctgggttgatagacatgagaaggggaagggttctaggccagagtgtcctgtttagacgacactgagattatagcctttatagcctttgtttgctactatgtgtatgtatagcagacaaacttaaatccttatctaaaatacttgttctctctagatgtttaaaagtgcacaacataagttaaaagtagagttaaggtaacacctttaagtatttttttcctgttaatccataggaatggttgtatttggggaatggaattgttaaacctgagtcttggagagtatgctgactgttcactggggggttgggggggaggggcagggaaggaagtgcagagagaaggttctgtgcccatgagtctttatagacaagttgagattgtctaatgttctgtctgtgttttagttaatattgctgtatattaaagaataaacacatcctaatgcctgaagtatattaaagtagaggtagtaaaataatccctttataaatgcccttttgttgttttttaggaagggctatgtcttctgggagtgtctatgttaatccacctcttggagctaaatgtagtcctgtacttagtcgctgaaatgctggaggagggtaagaggaagggtgaagggaagggctcttggctgataacctccatatctagaaaacagttttaggttataaccataggtctatgtgtgtgcatttttgtaaagtacctatgtgtattgtgaacaaggttcattctttactttgcaacatctaagctttttagatgtcatgaggtgacaacgtataataaaaagtagagctagtgaattaaccaatttgtaaatatctttgatgtaactgataaaaaagcatcttggacatggaacttaaactgtctctgagaaatgtatgtgagaacttgttaggggggcagaaagagtattaaagggaggggtgtatgcagatgtgtccatatttggatgataaccgttgatttgtgtgcatctctttggctgtactataagaatacattgttaagcaattcagtggaaacatacctccttgctaatattttaatagtatagattgggtaatgaaccctcttagaagcattatacttcatgtactctgttgctttatgtctcatttttaattgcattaggggaatatagtactttaatcataactgccaatatctttagaggcctgttgccatttcttatttttatgaaatttttgttgccaagaaaggattacacttttccttccagattgagttggtgtagtgtattggttatcaaaatactcatagttttgggactctggaatggtaaatattcataatgtgtgaaaaagcatgatgcctaattgtatgatcttaattacataaaaatggatgcttagttatgtagatacacaaatgagacctaggaggacacatcaaactgtaaactgcttgtgattatggattactttgttttttgcttcttgtgttttttggtttcctattatgcacatgttagctttcaagaaataaatgttattttaaaagccacgaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]