2024-04-26 10:07:39, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_001366537 4818 bp RNA linear MAM 19-FEB-2020 DEFINITION PREDICTED: Camelus ferus uncharacterized LOC106730107 (LOC106730107), ncRNA. ACCESSION XR_001366537 VERSION XR_001366537.2 DBLINK BioProject: PRJNA605179 KEYWORDS RefSeq. SOURCE Camelus ferus (Wild Bactrian camel) ORGANISM Camelus ferus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_045714.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 19, 2020 this sequence version replaced XR_001366537.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Camelus ferus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4818 /organism="Camelus ferus" /mol_type="transcribed RNA" /isolate="YT-003-E" /db_xref="taxon:419612" /chromosome="19" /sex="male" /tissue_type="ear skin" /country="Mongolia" gene 1..4818 /gene="LOC106730107" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns" /db_xref="GeneID:106730107" ncRNA 1..4818 /ncRNA_class="lncRNA" /gene="LOC106730107" /product="uncharacterized LOC106730107" /db_xref="GeneID:106730107" ORIGIN
ccggtacccctcctctctgactagcgaagagaactgccaagtcagttccggcagagcgcggtgagaaagagactgcggctttctctcccggggccctccaggccctccggcctcaggccggagggtgagctggggggcccggggacaggctgcgagctgtgtcctgcagagccccagagccctcgctgcggccgcccacgggcggggttcagcccttgaagcagcagcgaccctctccccaacccccacctccgagacctaatggcggcggccccttggagcccggacctcgccgaccgcgcggtctcttggctgaacgctgcagagcttaggcgaagcctccgccaagctgccgaggacgtggcgcctttgggcgtcgggcgtggcagggcgagaagaatggcggccactggaacgctgcggagggccgttagatcctcgagggcccaagaaggcggttctccatggacaccagcttggccagccttaggccttggggctgcgcagatccgggacctggggtgaccgctcagtcccaggcggacgagacctcacctcgtctggtcaacgacggacaaaggccttaacgggcccggaagaaatgtcttcaggaaatgacttttttgaaatggaattgtttgacctcctctagaagcgacatcaggagcgacacaggtccacgtttgttcagtgagttagaggacatggagtggaaaaccgtgcgtgaagaggaggaaaagaaggttccatgccagactggtcatacttagaagacacttccatatgataaccattgtcttgtgtctgcattttattcctcactactgtatatatagttgacaatgctaagtacttttttgaaatatctagtcttcctagatgttctgaagtgcctgatacatattaaaagtagaggtagtaaaaacattttgtaaatatctttttgttaaaattcatatgaaatattgtttattttgtgggggattggccacaccacctctttgaacagtacacactgcgtttgtgcactggttcaaggtagggggaaggagaaggaagtgcaaagagctctgtgccagtgtgttaatagtgacacaaggttaaccattgtcctttttatattcatgcattttgtttcactttgctgtgtatatagtgtatataatggacaaatgagtcctaatttacaacatctagtctttctagatgttaaagaggttgccagtgtatgacaaaaatagttagtaaactaatacatttttgtacattttgtgataaaatttctaggaaagactgtcttctgaaaatttgagcattatagtcctctgagttggtggaggagagagggagggaagggggttggtcttaggctataatgctcatgtttcaaagacacttgcagattataactattacatgtgtgcagtttattcaggactgctctgtatatagtggacaaattaagtccttatttgaaacatctagtccatctagatgtttagaagtgcccgacgtatgttaaatgtagaggtagtaaaatatcgctttgtaaatatctttttgctaaaatttataagaaattctgtcttttgggaatggaatagttaaaccacctctgtgagcagtatattattgtctatacttgttcagtggttcagaggtggtgggagggagggaaagaattgcaaaaggtaatatgctagtttgtacctggacttttacagataaaatcattttttgtatgttatgtgcattttgttttgctgtgtaaatagtgtatataatggacatatgagtcctaattttgcaacatctagtctctagatgttaaagaggttgtcagtgtatgaaaagtagtaaaattagcacattttgtacgctttgtgttgaaattcataggaaagctcatcttctgtaaatgacttttgggtgtgaatttgttcagctacctgtaagcattacacatgcctgtacttgtccactgcatggtggtggagagaaggaagtgagggaggaactggttcaggccaaaatggtcatatttagaaaatacctcagcttataaccattgttaggtgtgtgcaattttatttaacagtgctgtgtacatagtggatataagttcttatatgaaatatctagtctttctagatatttagaagttcttgatgtatttaaaaagtagtattagtagaatagtgcttcttgcacatagcttttaaaaacttgggaaatactgtctttggaagtggaattgttaaacctctctgaacagcatactctgcttgttcactggcttgagggaggtggaagggaagattgcaaaagatgttttgctagtgtgtactagaaattttgaacttacctattgctttatttgttacatgcattgcatttaactttgctgtatatattatgtatatactggacaaatgggtcccaattttataatatctagtctctagatattaaagaggttgacaatgtatgacaaaagtagagttagtaaactaacacattttgtacactttgtgttaaaattcatcgaaaggctgtcttctgaaaaggacttttgaaaatgaagttctaaattgcatctaagtgacacatgtgcctgtactagcccattgttggatgagtgatggaaggagttgggagaaatgaagggttctagactagaatgttcctacagagaagacactttaagataaaaccattgttacatgtgtgtagtttattcaacactactgtgtatatagtggacaaactcaagtccttatttgaaacatctagtctttctagatgtttagaagtgcacaaagtatgttaaaagtagaggtagtgaaataacattttgtagatatccttttgttaaaattcatataaaatactgtcttttagaaatggaatgatcaaatgatcacctctctgagcagtacacgttattttatttgtgctggtttgaggaggaagaagtgcaaagggctttataccagtacgtttgtagttaggcaagattaaccattgtcccatacgtacgtctgcattttgttttacttagctgtgtatatagtgtacataaaggacaaacgtcccaacttacatctagtcttcctagatgttaaagaggtttccagtatatgacagaagtagagttagtaaacaaatacattgtgcatactttgtgttcaaattcataggaaaggctgttctgaagatttgaaattgttaacatcccctctgagcattacagatgcttattacacttgcccgctgggttgatagacatgagaaggggaagggttctaggccagagtgtcctgtttagacgacactgagattatagcctttatagcctttgtttgctactatgtgtatgtatagcagacaaacttaaatccttatctaaaatacttgttctctctagatgtttaaaagtgcacaacataagttaaaagtagagttaaggtaacgcctttaagtatttttttcctgttaatccataggaatggttgtatttggggaatggaattgttaaacctgagtcttggagagtatgctgactgttcacttgggggggggggcagggaaggaagtgcagagagaagggttctgtgcccatgagtctttagacaagttgagattgtctaatgttctgtctgtgttttagttaatattgctgtatattaaagaataaacacatcctaatgcctgaagtatattaaagtagagatagtaaaataatccctttataaatgcccttttgttgttttttaggaagggctatatcttctgggagtgtctgttaatccacctcttggagctaaatgtagtcctgtacttagtcgctgaaatgctggaggagggtaagaggaagggtgaagggaagggctcttggctgatacctccaaatctagaaaacagttttaggttataaccataggtctatgtgtgtgcatttttgtaaagtacctatgtgtattgtggacaaggttcattctttactttgcaacatctaagctttttagatgttatgaggcgacaacgtatgataaaaagtagagctagtgaattaaccaatttgtaaatatctttgatgtaactgataaaaaagcagcatcttggacatggaacttaaactgtctctgagaaatgtatgtgagaacttgttaggttggcagcaggggggcagaaagagtattaaagggaggggtgtatgcagatgtgtccatatttggatgataaccgttgatttgtgtgcatctctttgggctgtactataagaatacattgttaagcaattcaagggaaacatacctccttgctaatattttaatagtataggttgggtaatgaaccctcttagaagcattatacttcatgtactctgttgctttatgtctcatttttaattgcattaagggaatatagtactttaatcataactgccaatatctttatctagaggcctgttgccatttcttatttttatgaaatttttgttgccaagaaaggattacacttttccttccagattgagttggtgtagtgtattggttatcaaaatattcatagttttgggactctggaatggtaaatattcatgatgtatgaaaaagcatgatgcctaattgtatgatcttaattacataaaaatggatgcttagttatgtagatacacaaatgagacctaggaggacacatcaaactgtaaactgcttgtgattatggattactctgttttttgcttattgtgttttttggtttcctattatgcacatgttagctttcaagaaataaatgttattttaaaagcca
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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