2024-05-03 22:20:07, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_461982 744 bp mRNA linear PLN 20-APR-2018 DEFINITION Debaryomyces hansenii CBS767 DEHA2G10010p (DEHA2G10010g), partial mRNA. ACCESSION XM_461982 VERSION XM_461982.1 DBLINK BioProject: PRJNA12410 BioSample: SAMEA3138183 KEYWORDS RefSeq. SOURCE Debaryomyces hansenii CBS767 ORGANISM Debaryomyces hansenii CBS767 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces. REFERENCE 1 (bases 1 to 744) AUTHORS Dujon,B., Sherman,D., Fischer,G., Durrens,P., Casaregola,S., Lafontaine,I., De Montigny,J., Marck,C., Neuveglise,C., Talla,E., Goffard,N., Frangeul,L., Aigle,M., Anthouard,V., Babour,A., Barbe,V., Barnay,S., Blanchin,S., Beckerich,J.M., Beyne,E., Bleykasten,C., Boisrame,A., Boyer,J., Cattolico,L., Confanioleri,F., De Daruvar,A., Despons,L., Fabre,E., Fairhead,C., Ferry-Dumazet,H., Groppi,A., Hantraye,F., Hennequin,C., Jauniaux,N., Joyet,P., Kachouri,R., Kerrest,A., Koszul,R., Lemaire,M., Lesur,I., Ma,L., Muller,H., Nicaud,J.M., Nikolski,M., Oztas,S., Ozier-Kalogeropoulos,O., Pellenz,S., Potier,S., Richard,G.F., Straub,M.L., Suleau,A., Swennen,D., Tekaia,F., Wesolowski-Louvel,M., Westhof,E., Wirth,B., Zeniou-Meyer,M., Zivanovic,I., Bolotin-Fukuhara,M., Thierry,A., Bouchier,C., Caudron,B., Scarpelli,C., Gaillardin,C., Weissenbach,J., Wincker,P. and Souciet,J.L. TITLE Genome evolution in yeasts JOURNAL Nature 430 (6995), 35-44 (2004) PUBMED 15229592 REFERENCE 2 (bases 1 to 744) AUTHORS Casaregola,S., Val,M.E., Neuveglise,C., Talla,E., Martin,T., Durrens,P., Barbe,V., Bleykasten,C., Bon,E., Despons,L., Fritsch,E., Groppi,A., Iragne,F., Jauniaux,N., Leh,V., de Montigny,J., Pottier,S., Straub,M.L., Wirth,B., Wincker,P., Sherman,D.J., Gaillardin,C. and Souciet,J.L. TITLE The second release of the complete genome of Debaryomyces hansenii type strain CBS767 JOURNAL Unpublished REFERENCE 3 (bases 1 to 744) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-APR-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 4 (bases 1 to 744) AUTHORS Genoscope -,C.E.A. TITLE Direct Submission JOURNAL Submitted (10-SEP-2008) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr) COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_006049). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..744 /organism="Debaryomyces hansenii CBS767" /mol_type="mRNA" /strain="CBS767" /type_material="culture from type material of Saccharomyces hansenii" /db_xref="taxon:284592" /chromosome="G" gene <1..>744 /locus_tag="DEHA2G10010g" /db_xref="GeneID:2904875" CDS 1..744 /locus_tag="DEHA2G10010g" /note="uniprot|Q6BII9 Debaryomyces hansenii RIB7 5-amino-6-(5- phosphoribosylamino) uracil reductase (EC 1.1.1.193)" /codon_start=1 /transl_table=12 /product="DEHA2G10010p" /protein_id="XP_461982.1" /db_xref="GeneID:2904875" /db_xref="GOA:Q6BII9" /db_xref="InterPro:IPR002734" /db_xref="InterPro:IPR011549" /db_xref="InterPro:IPR024072" /translation="
MSLLPLTPSLRPFLEEYLPRPCSNRPFVTLTYAQSLDSRIAAKPGEQTKISHLETKTMTHYIRSKHDGIMVGIGTVLADDPKLNCRFEAEDGNISTPRPIILDPTGKWAYHKSQLRSVCDNNKGLAPFILIDETVTPRNEDVEVLDKQDGAFVRLPLLRNADKVGNWNIILKKLFQLGIKSIMVEGGASIINDLLVYSKIIDSLIITIGPVFLGKDGVEVSPSGHAGLIDVKWWQGIQDSVLCARLT"
misc_feature 73..738 /locus_tag="DEHA2G10010g" /note="Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5; Region: DHFR; cl17279" /db_xref="CDD:450177" ORIGIN
atgtcccttttgccgctcacaccatcattgaggccatttctcgaggagtacctcccaaggccatgctccaacagaccgtttgtaacgcttacatatgcacagtcgttagattctcgcatagctgctaaacctggtgaacaaaccaaaatatcacaccttgaaactaaaacaatgacacattatattcgttcgaagcatgacggtataatggtgggaataggtactgtgttagccgatgatccaaaattaaattgtcgttttgaagctgaagatgggaatatttctacaccgagacccattatcttagatcctaccggaaaatgggcatatcataaatcccaattgcgttctgtatgtgataataataaaggattagcccctttcatcctaattgatgaaaccgtgacaccgagaaatgaagatgttgaagttctagataagcaggatggtgcatttgtcaggcttcccttacttcgcaatgcggacaaggttgggaattggaatattatattgaaaaaattgtttcaattgggtatcaaatctatcatggttgaaggaggtgcaagtataatcaatgacttgttggtttatagtaagattattgatagtttgattattacaataggccctgtattcttgggtaaagatggagttgaagtaagcccttcgggacatgctggcttaattgacgtcaaatggtggcaaggaatacaggatagcgtattatgcgccagacttacatag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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