LOCUS       XM_078618892            7935 bp    mRNA    linear   VRT 20-JAN-2026
DEFINITION  PREDICTED: Lampetra planeri copper-transporting ATPase 2-like
            (LOC144736269), transcript variant X1, mRNA.
ACCESSION   XM_078618892
VERSION     XM_078618892.1
DBLINK      BioProject: PRJNA1399516
KEYWORDS    RefSeq.
SOURCE      Lampetra planeri (European brook lamprey)
  ORGANISM  Lampetra planeri
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata;
            Hyperoartia; Petromyzontiformes; Petromyzontidae; Lampetra.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_136166) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_965212315.1-RS_2026_01
            Annotation Pipeline         :: NCBI Eukaryotic Genome Annotation
                                           Pipeline (EGAP)
            Annotation Software Version :: 10.5
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/15/2026
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7935
                     /organism="Lampetra planeri"
                     /mol_type="mRNA"
                     /db_xref="taxon:7750"
                     /chromosome="60"
                     /geo_loc_name="Sweden:Skane, Hunserodbacken"
                     /collection_date="2020-10-27"
     gene            1..7935
                     /gene="LOC144736269"
                     /note="copper-transporting ATPase 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 long SRA read, 13 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     10 samples with support for all annotated introns"
                     /db_xref="GeneID:144736269"
     CDS             1240..5805
                     /gene="LOC144736269"
                     /codon_start=1
                     /product="copper-transporting ATPase 2-like isoform X1"
                     /protein_id="XP_078475018.1"
                     /db_xref="GeneID:144736269"
                     /translation="

MAEEEVKAGAEVKVDVEVKADMEVWHSTFTVEGMTCQSCVQSITKVLADLPGIYSVQVSLENKSASVLYDPALHTLNSLKDSIEDIGFEAAHRGAATVMMLEVADVDIVGMTCQSCVQSIEGKMSKLKGVLSFSVCLQKNNATAAFIPEVISMQKLCDEIEDMGFEARPVDRKPATDTAEEGRSTAEDMVKMRLEGLIGQSAVNAVEGKLSKLNGVLRVKVNLSSQEVVVWFQKLVISVDDIQNQIAECGLQTTVRSRPKQLRLSPQAVQKLQEMNGSVCHFKEAKPTSLGLGKCPNVAISVEGMHCKSCVFNIESNIGQLPGVHSIVVSLETKSAAVIYSPEDISPAALCQAIEALPPGIFKASVSPTSAKAVASPPPPPLSSVVMLRVEHMESAAGVLAVERALLECPGVKTARASLVDSTATVHYDPRGVSPAALCASITGKGFKASLLDGSDPKSRASHSQFLLEGSTTPSLNGSRPGWHASTSSSSKGAMQLVPTEEEAVVASAKEEEAKCFLMVTGMTCASCVANIERVLGRRHGVQSVLVSLMAGKAEVRYHPASVAPEEIAESVRDMGFGATLLDNQDIAPGCLELVVQGMRSASCAHAIESALTQCHGVTSTAVALATNRAHVEFDPDQIGPRDIIKAVQNAGFHAVHLKRDRTGNHLDHSDKIHQWRRSFFFSLIIVVPTMGMMIYMMVTERHHEGHHTGILAKHIVPGLSLMNLAAFVLCTPVQFIGGWYFYKQAYGALRHGTANMDVLIVLATTVAYAYSCVVLFVAMGEQAMVSPITFFDTPPMLFVFVSLGRWLEHIAKSKTSEALVKLMSLQAAEATVVKYGLYNDIIGEEQVDVDLVHRGDVVRVLPGGKFPVDGKVVEGQSLADESLITGEAMPVMKKPGSLVIAGSINQNGGLLVKATHVGADTTLSQIVRLVEEAQTSKAPIQQFADKISGYFVPFIVGVSVVTLLSWVTIGYVDFSIAKKYFPEYDSRLSHGEVVWRLAFQAAITVLCIACPCSLGLATPTAVMVGTGVGAQLGILIKGGEPLEMAHKVRTVVFDKTGTITHGIPKVMRVSILEEHVKLPLHTFLAVVGTAEASSEHPLGSAVAKYCRQNLGTESLGSCADFQAIPGCGISCRVSDVEAVLASSKQGLAAANSVAAALLVDIADGGPAGSRTISSTDVGAGPAATSGQEYAVLIGNREWMNRNALLVAEPVDKAMTEHEEKGQTAVLVAINGKLCGMLAIADTVKPEAALAVRTLADMGLQVVLMTGDNRKTAQAIAAQVGIRRVFAEVLPSHKVAKVEQLQESGQTVAMVGDGVNDSPALARADVGIALGTGTDVAIEAADIVLIRNDLLDVVASIHLSKKTVRRIHINFVFALIYNVVGIPIAAGVFMPAGLVLQPWMAAAAMAASSVSVVLSSLLLKRYKKPSRLRLEAQTRGRVRECSLSEVSVAVGMGDRPAWVDGRTSPKLGVWDRVKFISQTSIASLTADKRMAGGTAALSVQLLDRHSLLGDGGSHHEFTTDV"

     polyA_site      7935
                     /gene="LOC144736269"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

tcctcatcatgatcaccaccaccaccaacaaccacaacaaccaccgggcagcagcaacagcgggtgacgtcgcaaggcaccgagtcgccgtgacgtcacatcctcaccaacaccaacaacaaccaacgggcagcagcaacagcgggtgacgtcacaaggcaccgaatcgtcgtggcgtcacatcctcatcaataacaaccacaaccacagagcagcagcaacagcgggtgacgtcacaaggcaccgagtcgccgtgacgtcacatcctcaccaacaccaacaacaactaattttagatttgacggagacttgtgttgcctccgaaacgtcgtgatttttgttttattttattttcattcattttgatgttttacctacgtgactttaacgaaaaaacctaagaataagaataccaacaacaaccacaaccaacgggcagcagcaacagcgggtgacgtcacaaggcaccgaatcatcgtgacgtcacatcctcatcaacaacaaccacaaccaccggcaagcagcaacagcgggtgacgtcacaaggcaccgagtcgccgtgacgtcacatcctcataatcctctttccgcctccgcctcctcctcgttacgtcatcagcaagcgacttccagcgcgcgccatcgcgtcgcggtaacatcgtcatcaccggtcacatcgttgacaatcaccaccatcagtagcatcaaacaacaccaccaccgtcaaacaacaccaccatcaacaacaccatcaacaacaccaccatcaaacaacaccaccgtcatcatcactaccgtcaaacaacaccaccatcaccaccgtcatcatcactaccgtcaaacaacaccaccattatcagcgtcaccaccaccatcagcagcatcagcatcaaacaacaacaccatcagcaacaccatcatcaccgtcaccaccaccaccgtcaccaccacaatcatcagcagcaccatcatcatcaccaccagcaccaccagcaccaccaccaccaccatcatcaccagcatcagcaacaccctcgtccaccgtgcggctgggttacgggtcgcgcggggccagggcgtcccgactctcatccccccctcatctcccctctcatcccctccgactctcatcccatcggattgcgcagtggacgcgaagcttccggcctcagctctgagggcttcggcgcgtggcggcaacgtgtggcttgaaaaccggagcactgtgagccgctgggcatggcggaggaggaggtgaaggccggcgcggaagtaaaggtcgatgtggaggtgaaggccgacatggaggtgtggcactccacattcaccgtggaaggcatgacgtgccagtcgtgcgtgcagagcatcaccaaggtgctcgcggatctgcccgggatctacagcgtacaggtgtctttggagaataagagtgcttcagttctgtacgacccggcactgcataccctcaactctctgaaagacagcattgaggacattggctttgaggcagctcacaggggagcagccaccgtcatgatgctggaagtcgccgacgttgacattgtgggcatgacctgtcagtcgtgtgtgcagagcatagaggggaaaatgtcaaagctcaagggagtgctgagtttcagcgtgtgcttacagaaaaacaatgccacggccgcattcattccggaggtcataagcatgcagaagctgtgcgacgaaatcgaagacatgggattcgaggcgcgccccgtcgatcggaagcctgccacggacaccgcggaggagggcaggtcaaccgccgaggatatggtgaaaatgagactcgaaggattgattgggcaatcggcggtgaatgcagtggaggggaagttgagcaagttgaatggtgtcctgcgtgtgaaggttaacctgtccagccaggaggtggtcgtgtggttccagaaactcgtcatcagcgtcgacgacatccaaaaccagatcgccgaatgtggtttgcaaaccacggtgaggtcgcgtccgaagcagctgaggttgtcgccgcaggccgtgcagaaactgcaggagatgaacggctctgtgtgccatttcaaagaagccaagccaacgtcgctgggcctcgggaagtgtccgaacgtcgccataagcgtcgaggggatgcactgcaagtcgtgcgtctttaacatcgagagcaacatcggccagttgcccggagtgcacagcatcgtggtttctctcgagacaaagtcggctgcggtgatctacagcccggaggacatctcccccgcggctctatgccaggccatcgaggcgcttccacccggcatctttaaagcgagcgtctcgccaacgtcggcgaaggcggtggcgtccccccctcctcctccgctgagcagcgtcgtgatgctgcgcgtggagcacatggagagcgccgctggcgtcctcgccgtggagcgcgccctgctggagtgccccggcgtgaaaacggcgcgcgcctcgctcgtcgacagcaccgccaccgtgcactatgacccccggggcgtcagccccgccgctctctgcgccagcatcaccggcaagggcttcaaggcttccctgctcgatggcagcgatcccaagtcacgggcaagccactcgcagttcctactggagggctcgactaccccctcgctcaacggcagcaggccgggctggcacgcgtccaccagcagcagcagcaagggggccatgcagctcgtgcccaccgaggaagaggcggtggtggcatcggcgaaggaagaggaggccaagtgcttcctgatggtcacgggcatgacttgcgcctcgtgcgtggcaaacatcgagcgcgtgctcggcagaaggcacggtgttcagtcggtgctggtgtcgctcatggccggcaaggccgaggtgcgctaccacccggcctccgtggccccggaggagatcgcggagagcgtgcgagacatgggctttggggcgacgctcctcgacaaccaggacatcgcgccgggctgcctggagctcgtggtccagggcatgcggtcggcgtcgtgcgctcacgccatcgagtcggcgctcacgcagtgccacggcgtcacgagcaccgccgtggcgctggccacaaaccgggcgcacgtggagttcgaccccgaccagatcggcccgcgggacatcatcaaggctgtccagaatgccgggttccacgccgtccacctgaagagagaccgcacggggaaccacctcgaccactcggacaagattcaccagtggcgaaggtcattcttcttcagcctgattattgtggttcctaccatggggatgatgatttacatgatggtgacagaacgccaccacgagggccaccacaccggcatattggccaagcacatcgtgccgggactctctctgatgaacctcgctgccttcgtgttgtgcaccccagtgcagttcatcggcggctggtacttctacaagcaggcctacggggccctgcgtcacggcacggccaacatggacgtgctgatcgtcctggcgaccaccgtggcgtacgcctactcgtgcgtggtgctcttcgtggccatgggggagcaggcgatggtcagccccatcacgttcttcgatacgccgcccatgctcttcgtgttcgtgtcgctcggccgctggctcgagcacatcgccaagagcaaaacctcggaggcgctcgtcaagctgatgtccctgcaggctgcggaggccacggtggtgaagtacggactctacaacgacatcatcggagaggagcaggtggacgtggacctggtgcaccggggggacgtggtgcgagtgctgcccggagggaagttcccggtcgacgggaaggtcgtcgaggggcagtccctcgccgacgagtctctcatcaccggggaggctatgccagtgatgaaaaagccggggagcctggtgatcgctggctccatcaaccagaacggcggcctgctggtgaaggccactcacgtgggagccgacacaacgctgtcccaaattgtgcggctggtggaggaggcgcagacttccaaggcacctatccagcagtttgccgacaagatcagcggctactttgtgccgttcatcgtgggcgtttcggtggtgaccctactctcctgggtcaccatcggctacgtggatttcagcatcgctaagaaatattttccggagtacgattcgaggctgtcgcacggcgaggtggtctggcgcctcgccttccaggcggccatcacggtcctgtgcatcgcgtgcccctgctcgctgggcctggccacccccacggccgtcatggtcggcacgggggtcggagcgcagctgggcatcctcatcaaaggcggcgagcccctggagatggctcacaaggtgcgcacggtggtatttgacaagacgggcacgatcacgcacggcatccccaaggtgatgcgcgtgtccatcctggaggagcacgtgaagctgcccctccacacgttcctcgcggtggtgggcacagcggaggcgagcagcgagcacccgctcggctctgccgtcgccaagtactgtcggcagaacctcggcaccgaaagcctgggatcgtgcgccgacttccaggccatccctgggtgcgggatcagctgccgcgtgtccgacgtggaagccgtgctggcgtcgtcgaaacagggccttgccgccgccaactcggtggcagcggcgctgctggtagacatcgccgacgggggacccgcgggctcccgaaccatctccagcaccgatgtgggggctggaccagcagcaacctcggggcaagaatacgcggttttgattggaaaccgcgagtggatgaaccggaatgcgctgctggtggcggagcccgtcgacaaggccatgactgagcacgaggagaagggccagaccgccgtcttggtcgccatcaacggcaagctgtgcggcatgctggccatcgcggacaccgtgaagccggaggccgcgctcgccgtgcgcacactcgccgacatgggcctccaggtggtgctcatgacgggcgacaacaggaagacggcacaagcgatcgcggcccaggtgggcatcaggcgcgtgtttgcggaggtgctgccctcgcacaaggtggccaaggtggagcagctgcaggagagcgggcagacggtggcgatggtgggcgacggcgtcaacgactcgccggcgcttgcccgcgccgacgtgggcatcgcgctcggcaccggcaccgacgttgccatcgaggcggcggacatcgtgctcatccgcaacgacctgctggacgtcgttgccagcattcacctctccaagaagacggtgcgacgcatccacatcaacttcgtgttcgccctcatctacaacgtcgtcgggatccccattgctgcaggggtgttcatgccggcggggctagtgctgcaaccgtggatggcggccgcagcgatggctgcctcgtccgtgtctgttgtgctctcgtcgctgctgctcaagaggtacaagaagccgagccgcctgcgcctggaggcgcagacccggggccgcgtacgcgagtgcagcctctcggaggtgagcgtcgccgtgggcatgggagaccgtcccgcctgggtggacgggcgcacctcccccaagctgggcgtctgggaccgcgtcaagttcatcagccagacgtccatcgcgtcgctcaccgcggacaagcgcatggccggcggcaccgccgccctctccgtgcagctgctcgaccggcactcgctgctcggcgacggcggctcgcaccacgaattcacgaccgacgtgtgaacggcgcgatggctggggactgaccgtcgttggccgctgtggtcgatcgccgtgctcgcctgtgctgggagagagcccgtcgagcgtgaagcctccaccgccgcccctccctcccccgcacctccccggtcctttccccagcggtgcatcttgtgcaataacgtgatggcaaccttgaagtctatcgcacgcttgcaagacgaggtttttagctcgaacttttacaatgtaaatacgttgttggacttgccgacatgtcgtggttttagtgaagtcacgaacgaggatttttttttgttttcgcctgaagattaacgtgaaagcgagcacgcgatgtcgcctcctgcgacgctcgtttcgtgccacgggaacagagaaccggaactttcccttgtctaggaccctctttaaaaaaaagagtccgtgagactccgtgaagctttcctgggttaacaagcataatcaaaataatactaattagtgtgaacgcattccattcattcataccgacagggagtggcgtgctcgattgctctctctcgctcgctgcgccctgtttagcctcttcatataagtttatttttattacagtgcctctgcacgaggtgcattacctctcgttatacaatatttgtatggtttaaaaacgataataatcctgtttctgcatctaaaatgcaaaaacatggttattagtttgttgtcctttccccgcacctccgattagcacggttggctacgtacggtgcgaaagatgttcaacatacatccgtacataacatgaatgggagcgatatataaacttgctccgatctgcagatgggggaaatggcaatttttttaacttgagtcctttgcaaagggtgacgtatcgtgtaattgatgccgagcgtgcagttataacggtgtaatgtgtaagggggggcagcagggtggtggagtggtggcgcagtggtcacgcttgcacctcagccagaaggggaggccagggttcgattcccgacacgggcgcccttctgtgtggagatgttcgctctccctctgctctgcgtcggtttcctgcaggttttctggttttctcctacagctcaaaacaacatacaatgtaactggtattgacaaaacatccagaacaataacaaaaaatactcagttgggattacgcacaacagcagcagcaacaacattgccccccggcccccaccctgctgcaaaaacctggcaggatcatcctgaaccttgagactttcctgggtaaacaagcagagtcatagtaaaatgtgaaactaatgcagttgtaaatggtggacagagaatttaattaatttcagcttaatcaaatcggagggagtggaggttgatttccctccctgccgccaaataactgtaaccgcattgagtcgagtgttttacgcaattttaccagtaattattttagtatccatttgcatgtatatatattttttaatgaaatcaaaaacattttacctagccatgttgctcaagtgattcgctcgacggttgccgtgatgaaggtagttttattttctatatacggtaagaacgagtcaagattaaccgtggaaatgtttttcattgttattatttgcgtaccctgcctcatagccatggtttcaagatcaaacgacaagagtgagaacattggaagcgatgcagaatttccaagcactttcgaatgtgcaaacgaattaaaaaaaatctacgtgtaacatttgcacgtttgccaatgacccgtcatccgtataaccatatttactgtgggccacagccatcgttggccaatccaccaggcacggttaaactctcttggtagatctcagagggctctgcgatccaccacaaagccatcaccaacaatgaccctgttctatatagggactcctctacttacgggcagacctgtccgtatgtccagttgcctgttcggactgccagtcgtaagttcagccaccgcgcaatagatggcggtggtggcatttacatctgcagaacgtgaagaaccatctacatctacaggagattatacaacgtttaaagtcgttcccgtgtgtagtgcacatgctgtacaacgtgttttagaatctacgggagtaaagttggacttacgaa

//