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Previous release (v1)
2025-11-04 05:09:45, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_076462974 6712 bp mRNA linear INV 29-AUG-2025
DEFINITION PREDICTED: Tachypleus tridentatus uncharacterized LOC143230026
(LOC143230026), mRNA.
ACCESSION XM_076462974
VERSION XM_076462974.1
DBLINK BioProject: PRJNA1303201
KEYWORDS RefSeq.
SOURCE Tachypleus tridentatus (Chinese horseshoe crab)
ORGANISM Tachypleus tridentatus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata;
Merostomata; Xiphosura; Limulidae; Tachypleus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_134834) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_004210375.1-RS_2025_08
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.5
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 08/27/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6712
/organism="Tachypleus tridentatus"
/mol_type="mRNA"
/isolate="NWPU-2018"
/isolation_source="Ocean"
/db_xref="taxon:6853"
/chromosome="10"
/tissue_type="muscle"
/geo_loc_name="China"
/collection_date="2018-02"
gene 1..6712
/gene="LOC143230026"
/note="uncharacterized LOC143230026; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 12
long SRA reads, and 94% coverage of the annotated genomic
feature by RNAseq alignments, including 1 sample with
support for all annotated introns"
/db_xref="GeneID:143230026"
CDS 138..6275
/gene="LOC143230026"
/codon_start=1
/product="uncharacterized protein LOC143230026"
/protein_id="XP_076319089.1"
/db_xref="GeneID:143230026"
/translation="
MSSSSFVAFALISGIVSNRLPFKGLLSLGNKKKSQGARSVKMSSSSQDLLSVGPRSCESEDVMILGQKLQLTVEDYQGSKLPETSTEGCARDLEKPDFELIIYSPSPLDELRGFQELQECPPPLVDWSICFEQMTNGCNVLDANVELKSGNGYNPGKLDENHTFYTEQKCLSSPVPKDNTCTGNSVHENAYFATNVAGSKVNKNLFPYEQTIVTMGDCKYDYDCNESDNDYSNHVKETIQEVPAILKYAYSEFCEGSVLHECDGVASLYRRNESKLTDQSSDTETGKSRHQTVLDGVKGLEKNMDNNSCNKKISYMSSLLRNCDDSSSVSNRHQYNDVNVSNKMTLNHELDFTTDSCKSNSLLDNSTQMSYWSETNSDTGNSNTISFSQKENCDYIDNNFQRKKLVNVNEKDGERNFQTTVNNSQGDKNDTSITLLEKMNNTMDVIVAKRTERSKLHHCELPETNSNVTLSVQKKCLFFRNNEIEERNSNIQLSKNASLISKRFLFTSSQDNQIPVKKIKTEENREKAIKIRDQYDWDIDSSSISGDVKTQNLLLNKQFQDGEVRKTTLEVQIIDGKDLCMYDCQNIFQVQTTDETKNAVVNLSQKNFQDEIIDTDNMQECNAEIPVINFETQTTNECKNAIVNLCQRNSQDQIIETDMQECNAEIPVINLETQTTNECKNAIVNLCQRNSQDQIIETDMQECNAKIPVINFETKTTDETKNAIVNLCQRNSQDQIIETDMQECNAEIPVINLETQTTNECKNAIVNLCQRNSQDQIIETDMQECNAKIPVINFETKTTDETKNAIVNLCQRNSKDQIIETDMQECNAEIPVINFETQTTDETKNAVVNLSQKNSQDEIIDTDMQECNAEIPVINFETQTTDETKNAIVNLCQKDYQDQIVETDMQECNAEIPVINFETQTTNECKNAIVNLCQRNSQDQIIETDMQECNAEIPVINFETQTTDETKNAIVNLCQRNSQDQIIETDMQECNAEIPVINFETQTTDETKNAVVNLSQKNSQDEIIDTDMQECNAEIPVINFETQTTDETKNAIVNLCQKDYQDQIVETDMQECNAEIPVINFETQTTNECKNAIVNLCQRNSQDQIIETDMHECNAEIPVINFETQTTDETKNAIVNLCQRNSQDQIIETDMQECNAEIPVINFETQTTDETKNAIVNLCQRNSQDQIIETDMQECNAEIPVINFETQTTDETKNAFVNLCQKNSQDQIIETDMQECNAEIPVINFETQTTEETKNAIVNLSKKNSQDEIIDTDMQECNAEIPVINFETQTTNECKNAIVNLCQRNSQDQIIETDMQECNAEIPVINFETQTTDETKNAIVNLCQKNSQDQIIETDMQKCNEEIPVINFETKYCDQTNNCKKLKYSIDVSHTCHPVQFMYHTKDYNGCDDNTHKTILQNQSTDQKNELECDVVISKKDLLTQLTDETNYSRVQDNDDVLTFHNESINLIKTTNNNNCTVEGSEKTIPQCQHNGQNINIFTQECVVGFFQSQLMQQIEEQEYKKGNSYAFTDETNVCDKQPCYLHATQNMFNIQSFDHGMLKGGVEVSHSQFCDQIKNSNTLTYCGRTCQTSSQTQLGNQQNSSDTMGFIVDGSQTTLQSQLTDESTNSITLECVTEPNASGIGVFHAFNKTQINDQIYRYNTQKSDVDIRQTVQKPQMNDQSYKSNALKSDDICLTVLQSHLIDQPHISDTYECDVEKYETALKNQLNCQPNKSGTLKCAINVFKTQMTEKQDNFDTSKYDIEVCQTKHQYQLTDQQNKPHTIESNVGDCQIFLKTQLTNEQTDADILGCDLDVCQTTWRTDLTDHVSNSDLWDLKQTQPEVHEKEYDTHVCKMNCLTLITNQFTNSDQKKFSVGIYQNVQSNNEKENLEIQTYQTSISTDHKSTKLGNTKDWDEPANSDTDYPKKALYDFHTVDQPSLFMPYKKSLTDKNIQTVLHGFHFMDSGQLSTAYDQLVPQSEEYAQKSDDDLSKTLYEKAFNWSSSSSVSQSLANKSESEEVHSRPLRIGLSRRQKVKSLHPYLFDKAS"
polyA_site 6712
/gene="LOC143230026"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
gacgtcataaaacaaaatgtactttatttagaagttacaggtctgggacctcttcaaagtactctcctccccaacgcacacacttatcccaacggtgtttccacttgttgaaacaatcctggtacgcttcttttgtaatgtcctccagctccttcgtcgcatttgccttaatctcgggaatcgtctcaaatcgtcttcctttcaagggtcttttgagtttggggaacaagaaaaaatcgcaaggagcaaggtcagtgaagatgtcatcatcatcccaagatttattgtcagttggtcctagatcatgtgagagtgaagatgttatgatattaggacagaaactgcagttaactgttgaggactatcaaggaagtaaacttccagaaacctccactgagggatgtgccagagatttagagaaacctgactttgaacttattatatatagtccatccccacttgatgagcttagggggtttcaggaacttcaggagtgtcctcctcctcttgtagactggagcatttgttttgaacaaatgactaatggttgcaacgtacttgatgcaaatgtggaactcaaaagcggtaatggatataatccaggtaaacttgatgaaaaccatacattttatactgaacaaaaatgtctatcttcaccagttcctaaagataatacctgtacaggaaattctgttcatgaaaatgcatattttgcaacaaatgttgcaggaagtaaagtgaataagaacctgtttccttatgaacaaaccattgtaacaatgggtgattgtaaatatgattatgactgtaatgaatctgacaacgattatagcaaccatgtaaaagagaccatacaagaagtgccagctattctaaaatatgcatattctgagttttgtgaaggaagtgtgcttcatgaatgtgatggagtagcatctctttacagaaggaatgaaagtaaactgacagaccagtcatcagatacagaaactggaaaatctaggcatcagacagtgctggatggtgttaaaggtctggaaaaaaatatggataataacagttgcaacaagaaaattagttacatgagttcactgcttcgtaactgtgatgactcatcaagtgtttcaaatcgccatcaatacaatgatgtgaatgttagcaacaaaatgacactgaaccatgaattagattttacaactgacagttgtaagagtaattctcttttagataattccacacaaatgagttactggtcagaaactaacagtgatactggaaattcaaatacaattagtttttcacaaaaagaaaactgtgactatatagacaacaacttccagagaaaaaaattagtaaatgtaaatgagaaagatggtgaaagaaacttccaaaccacagtaaacaattctcaaggggataaaaatgatacatccattacattattagaaaagatgaataacactatggatgtcattgtagccaaaagaacagaaagaagtaaactgcatcattgtgagctgcctgaaaccaacagtaacgttactctttcagttcaaaagaagtgtttattttttagaaataatgagattgaagaaagaaatagtaatatccagctgtctaaaaatgctagtttgatttccaaaagatttctatttacttcttctcaagataatcaaattcctgtgaaaaagattaagacagaagaaaacagagaaaaagctattaaaataagagatcaatatgactgggatatagacagcagttctattagtggtgatgtaaaaacacaaaatctgctattaaacaaacaatttcaagatggtgaggttcgtaaaacaactcttgaagttcagattattgatggaaaggacttgtgtatgtatgattgtcaaaacatttttcaagttcaaactactgatgaaactaagaatgctgttgtaaatttatctcaaaaaaactttcaggatgaaattatagacactgataatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactaccaatgaatgtaagaatgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcagaaatcccagtaataaatcttgaaacccaaactaccaatgaatgtaagaatgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcaaaaatcccagtaataaattttgaaaccaaaactactgatgaaactaagaacgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcagaaatcccagtaataaatcttgaaacccaaactaccaatgaatgtaagaatgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcaaaaatcccagtaataaattttgaaaccaaaactactgatgaaactaagaatgctattgtaaatttatgtcaaagaaactctaaggatcagattatagaaactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgatgaaactaagaatgctgttgtaaatttatctcaaaaaaactctcaggatgaaattattgacactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgatgaaactaagaatgctattgtaaatttatgtcaaaaagattatcaggatcaaattgtagagactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactaccaatgaatgtaagaatgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgatgaaactaagaatgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgatgaaactaagaatgctgttgtaaatttatctcaaaagaactctcaggatgaaattattgacactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgatgaaactaagaatgctattgtaaatttatgtcaaaaagattatcaggatcaaattgtagagactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactaccaatgaatgtaagaatgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcatgaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgatgaaactaagaatgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgatgaaactaagaatgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgatgaaactaagaatgcttttgtaaatttatgtcaaaaaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgaggaaactaagaatgcgattgtaaatttatctaaaaaaaactctcaggatgaaattatagacactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactaccaatgaatgtaagaatgctattgtaaatttatgtcaaagaaactctcaggatcagattatagaaactgatatgcaagaatgtaatgcagaaatcccagtaataaattttgaaacccaaactactgatgaaactaagaacgctattgtaaatttatgtcaaaaaaactctcaggatcagattatagaaactgatatgcaaaaatgtaatgaagaaatcccagtaataaattttgaaaccaaatattgtgatcagaccaacaactgtaagaaattgaaatatagtatagatgtttctcacacatgtcacccagtacagtttatgtaccacaccaaagattataatggttgtgatgacaatacacataagacaatacttcaaaatcagagtactgaccagaaaaatgaactcgaatgtgatgtagtcatttcaaaaaaagatcttttgactcagcttactgatgaaacaaattattctagagtacaagataatgatgatgtcttaacatttcacaatgaatcaattaacttgataaaaaccaccaacaataataattgcactgtagaaggctctgagaagacaataccccagtgtcaacataatggccagaatataaacatttttacacaagaatgtgttgtgggtttctttcaatctcagctcatgcaacaaattgaagaacaagaatataagaaagggaattcatacgcattcactgatgagacaaatgtgtgtgataaacagccatgttacttacacgccacacaaaacatgtttaatatccaatcctttgatcatggtatgttgaaaggtggtgtagaagtttcacactcccaattttgtgatcaaataaaaaattccaatacactgacatattgtgggagaacttgtcaaacatcttctcaaactcaactgggtaaccagcaaaacagttctgatacaatgggatttattgtagatggttctcagacaactctccagagccaactgactgatgagtcaactaattccattaccttagaatgtgttactgaacctaatgccagtggcattggtgtttttcatgcatttaacaaaacccaaataaatgaccaaatatataggtataatactcagaaaagtgacgtagacattcgtcaaactgttcaaaaaccacagatgaatgatcagtcttataagtctaatgctctaaaaagtgacgatatttgtctgacagttctccaaagccacttgattgaccagccacacatttctgatacatatgaatgtgatgtagaaaaatatgaaacagctctcaaaaaccaactgaactgccagccaaataagtctggtacactgaagtgtgctattaatgttttcaaaacccagatgactgaaaagcaagataattttgacacctcaaaatatgatattgaagtctgccaaacaaaacaccaatatcaattgactgaccaacaaaataaacctcatacaatagaaagtaatgttggtgattgtcagatatttcttaaaacccagttaactaatgagcaaactgatgctgatatattaggatgtgatctagatgtttgtcagacaacttggagaactgatttgactgatcatgtctccaattctgatttatgggatttgaagcagacacaacctgaagttcatgaaaaggaatatgacacacatgtttgtaaaatgaattgccttacactaattactaatcagtttacaaacagtgatcaaaagaaatttagtgtaggtatatatcaaaatgtgcagtctaataatgaaaaagagaaccttgaaatacagacttaccagacaagtatttccactgatcacaaaagtacaaaacttggtaacactaaagactgggacgagcctgcaaactctgacacagattatcctaagaaggctttgtatgactttcatacagttgaccagccctcattatttatgccatataaaaaatccctgacagacaagaatattcaaactgttcttcatggttttcattttatggacagtggtcagctgtccactgcttatgaccagttagtcccacaatcagaagaatatgctcaaaagtctgatgatgacctatctaaaactttatatgaaaaggcatttaattggagttccagctcatctgtttctcagtcactcgccaacaagtcagagtcagaagaagttcatagcagacctttaaggattggtttgtcacgaaggcaaaaagtcaaatctcttcatccatatctttttgacaaagcttcttaatacaagtattaagagaagccaaagttctagccatgtataccttctttataaactgtagtgaagtcaaaacttaacattcatatgttatctgagatttgttatttttgtgcctaatatatgcaaactatatgtagttcctacatatttagtgttttgatatttatgtttacttaaataagatatataataataaaaaatgtatgcatacttgtagttaaatcagcataattttgtatttttctcatttcatttaacatgaatgaatttcactttgttttataaaatattatcctagcttttgatgaattatctttatctataaatttagatgataactttcttaatttcactattttaactcatgaacagtgaatcgtactcgattttgtaaacatgtttgaaactacattaaaagtcagtgcttcttacactctgaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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