LOCUS       XM_076132742            6866 bp    mRNA    linear   INV 12-AUG-2025
DEFINITION  PREDICTED: Anticarsia gemmatalis copper-transporting ATPase 1
            (ATP7), transcript variant X4, mRNA.
ACCESSION   XM_076132742
VERSION     XM_076132742.1
DBLINK      BioProject: PRJNA1302500
KEYWORDS    RefSeq.
SOURCE      Anticarsia gemmatalis (velvetbean caterpillar)
  ORGANISM  Anticarsia gemmatalis
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;
            Ditrysia; Noctuoidea; Erebidae; Erebinae; Anticarsia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_134772) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_050436995.1-RS_2025_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/08/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6866
                     /organism="Anticarsia gemmatalis"
                     /mol_type="mRNA"
                     /isolate="Benzon Research Colony"
                     /isolation_source="Martin Lab, GWU"
                     /db_xref="taxon:129554"
                     /chromosome="28"
                     /sex="female"
                     /tissue_type="pool of 5 female pupal heads"
                     /dev_stage="6-12h APF pupa, 25C"
                     /geo_loc_name="USA: Washington DC"
                     /collection_date="2024-03-11"
                     /collected_by="Arnaud Martin"
                     /breed="Stoneville strain"
     gene            1..6866
                     /gene="ATP7"
                     /note="copper-transporting ATPase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 8 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:142984878"
     CDS             238..3891
                     /gene="ATP7"
                     /codon_start=1
                     /product="copper-transporting ATPase 1 isoform X3"
                     /protein_id="XP_075988857.1"
                     /db_xref="GeneID:142984878"
                     /translation="

MMSRGIKYQRLDDLDIGEPSQDLVAVRVPINGMTCQSCVRSIEGSVRELPGIQYVKVELSEHAGYFRYDPHAITVEAIRAHIHDMGFDVPDNADHETRHLLPKEIPTELLIDMSGTGEAEDMDVLINVIGMTCQSCVNTIEGALREMAGVIQATVTLSEALLRVKCTRGAVSPAQLCDAVYELGFEPTLISVDNERYIEGSPQSKSEEGSGDGIKPPSPVKSRTQANGTASPIPESETARCTLEVRGMTCASCVAAIEKHCAKLYGVHSILVALLAAKAEVRYEPRKISAQDVAHSITELGFPSSVISDCDGSGQKDVVVMIKGMTCASCVNKIEKSVLKLTGVVSCTVALTTSKGKIKYNAEQIGPRTICEAIDNLGFESSVVTPHNKGQTNYLEHKEEIKKWRNAFLISLLFGGPCMIAMAYFMSAMSAQHSAADMCCVLPGLSLENLLMWILATPVQFIGGWHFYKQAYKALSHGTSNMDVLISMTTTISYAYSLAVVIAAMATQQNTSPVTFFDTPPMLLVFVSLGRWLEHIAKGKTSEALSKLLSLKPTEAVLVTLDENGQPISEKSIPVDLVERGDMLKVVPGAKIPVDGKVVYGQSTCDESLITGESMPVAKKKDSVVIGGSINQHGALIVRATHTGEASTLAQIVRLVEDAQASKAPVQRLADTIAGYFVPLVVFLSVLTLVCWIISGALDINRIKSITPEIYLNGDYSDWELIIQTAFHFALSVLAIACPCALGLATPTAVMVATGVGAHMGLLIKGAEPLENAHKVKTVIFDKTGTITRGSATVANLSLLTPSATSLRDVLACLLTAELNSEHPVAAAIVNWCSSALGGSSGYQCVSFVAAPGCGLRARCKRTHAPPSNDQLDNALNQARSGNPVLIEGVPVHILQAPADAAHTAQQLHSLIRTESPMQDQEVEQVVLIGNREWMSRNGVTVPRQVQDAMQQDEELGRTAVLAAINDQLVCTIGVADEVKPEAHLAVYCLKKMGLQVCLLTGDNRKTAVAIARQVGINKVYAEVLPSHKVAKIQKLQESGQKVAMVGDGVNDSPALAHADVGIAIASGTDVAVEAADLVLMRNDLLDVVACLELSRTTVRRVRLNFVFASVYNLLGIPLASGALAMFHLQLQPWMASAAMAMSSVSVVCSSLLLKTFKKPSIEQLRTPEYLQSIHLEDLDSVSVHRGLDERIDPSERGASPLANKNRDSWKSTLLNV"

     polyA_site      6866
                     /gene="ATP7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

tctctccggcagtgcacgcgagagcccgcgacgatacactcgtcatgtacgaacacacccgaatatatacgaacttaaccgaagtgacagactttccattatacaaaatgctctaaattttatcataaatatccgttttttttttcttaaaaaaaaagcgtgtgagtgagacagtgttattaatttaagtgtaagtgtgaaagagatagtgttataagtgtaagtgttaaagacaacatgatgtcaagaggaattaagtaccagcggctggatgatttggatatcggagagccgagccaggacttggtggctgtgcgggtcccgatcaatggcatgacatgccagtcctgcgtcagaagcatcgagggctcagtgcgggagctgcccggcatacagtacgttaaggtggagttatcagaacacgccggctacttcagatatgaccctcacgccatcacggtggaggccatcagggcgcacatacacgacatgggctttgacgtgcctgacaacgctgaccacgagaccagacacctattaccaaaggagatccccacggagctgctgatcgacatgtccggcacaggcgaggccgaggacatggacgtactcatcaacgtcatcggcatgacttgtcaatcttgcgtcaataccattgaaggagccctacgagaaatggcaggtgtaatacaagcaacagtcacactatcagaagcattgttaagagtcaaatgtacgagaggtgccgtgtcccccgcgcagctgtgtgatgcagtgtacgagctgggattcgaacctacactcattagtgttgataatgagagatatattgaaggctcaccacagagtaaaagcgaggaaggatcaggagatggtatcaaaccaccttctcccgtcaagagtagaacacaagccaatggcacagcatcaccgatcccagagagcgagacggcacgatgtacgctagaagtccgaggaatgacgtgtgcttcctgcgtggccgctatagagaaacattgtgctaagttgtatggtgtccactcaatcctagtagcgctactagcagctaaagccgaagtgcggtacgagccgcgcaagatctcagcacaggacgtggctcattccatcacggagctgggctttccttcatccgtcatcagtgattgtgacggtagcggccagaaagacgtcgttgttatgataaaaggcatgacttgcgcgtcgtgtgtcaacaagatagagaagagtgtacttaaactaactggagtcgtgtcgtgtaccgtagctcttactactagcaaaggcaaaataaaatacaacgcggaacagataggtcctcggacgatatgtgaagctatcgacaacctcgggttcgagtccagcgtcgtgactccacataacaaaggacagactaattatttagaacataaagaagaaataaaaaaatggcggaacgcgttcctaatatcgctgctattcgggggtccgtgcatgatcgccatggcgtatttcatgtcggcgatgtcggcgcagcacagcgccgccgacatgtgctgcgtgctgcccggactcagcctcgagaacctgctcatgtggatcctggccacgcccgtgcagttcatcggcggctggcatttctacaagcaagcgtacaaagcgctaagtcatggtacttcaaatatggacgtgctaatctctatgactactactatcagttacgcctactccctagctgtggtgatagcagcgatggcgacgcagcagaacacaagtccagtgacgttcttcgacacgccgcccatgttgctagtgtttgtgtcgctcggcaggtggctcgaacacatcgccaagggtaaaacatcggaagcgttatcaaaactcttatctttgaagccaacggaagccgttttagtcacattagacgagaatggacagccgatcagtgaaaagagtataccagtagatctcgtggaacgaggggatatgcttaaggtggtgcccggagccaagatcccggtagacggtaaagtggtgtacggtcagagcacatgtgacgaatctctcatcactggggagtccatgcccgttgctaagaaaaaagactcggtagtaataggcggcagcatcaaccagcacggcgcgctgatcgtgcgcgccacgcacacgggcgaggcctccacgctggcgcagatcgtgcgcctcgtggaggacgcgcaggccagcaaggcgcccgtgcagaggctggcggataccatcgcgggttatttcgtcccgctggtagtgttcctatcggtgctgaccctggtgtgctggatcatcagtggagcgctagatattaacagaataaagagtattactccagaaatatacttgaacggtgactactcagactgggagctgatcatccagactgccttccacttcgctctctctgtcctggccatagcctgcccttgtgctttaggtctggcaacaccaacagcggtgatggtagcaaccggagtgggagcacatatgggactactcatcaagggagctgaacctttggagaacgcacacaaggttaaaacagtaatattcgacaagaccggcactataactcgtggtagcgcgaccgtcgccaacttatctctgctgaccccgtcagccacttcactgcgcgatgttctcgcttgtctgttgacagctgaacttaattctgaacatcctgtagccgccgcaatagtgaactggtgtagctcagccctgggtggcagtagcgggtaccagtgtgtgtcgttcgtggccgcgccgggctgcgggctccgggccaggtgtaagagaacacacgcgccacccagtaacgaccagctggataatgcgcttaatcaggccagaagcggtaacccagtgctaatagaaggcgtgccggtgcacatactacaggcgcccgccgacgccgcccacacggcgcaacagttacactcgctcattaggaccgagtcacccatgcaggatcaggaagtcgaacaagtagtgttaatcggcaacagagagtggatgtctcgcaacggcgtcactgttccccgtcaggtgcaagatgccatgcagcaagacgaggagttgggcagaacagctgttctagccgctatcaacgatcaactagtatgtacaatcggcgtagcggacgaagtgaagcctgaggcccacctagctgtgtactgtcttaaaaagatgggtctgcaagtgtgtctcctcactggagataatagaaagacggctgtcgctatcgctagacaagtgggcataaacaaagtatacgcggaagtccttccatcccacaaggtggccaagatccagaagctgcaggagtcaggtcagaaggtggcgatggtgggggacggcgtcaacgactcccccgcgctggcgcacgccgacgtcggcatcgccatagccagcggcactgacgtcgctgtggaggccgccgacctcgtgctcatgaggaacgacctactagacgtagtggcgtgtctagaactatctagaacgacagtacgccgagttcgtctcaactttgtgttcgccagtgtctacaacttgctgggaataccgctagctagtggcgcgcttgctatgttccacctgcagttacaaccgtggatggcgtcggcagcaatggccatgagttcagtttcagtagtatgttccagtttattactcaaaactttcaaaaaaccttcaatagagcaactccgaactccggaatacctacaatcaatacaccttgaagacctagactcagtgtccgtgcacagaggtctggacgaacggatagaccctagcgagaggggagcatcgccgctcgccaacaaaaaccgagactcgtggaagtccactctattgaacgtgtaaaactattctatcgcaacaagccagctgaaggttgccttctccaagaagacgatgacctcatgacagtctccttcatccccaaaagacggcaagagaccatcaacggttaaaaagaccagtagaccgaaaagaccaccagtagactaaaaagaccgcgagtagaccgagtagaccgtctatggaatgatggtattctgtactatttaatggcttgtttattaggaaagactgaataaatgattttagtgagaaaatgatgagtattttaaattgattatgttgtgtgacttaaaggttgcaggtttgattactgggtttgtttgcaatttggtttttaaagactgtttagtgacattgtttttctattgcggatggttgtgatgactgttgattgtaatgtcatagattcgattcccgggtcggtaaatgtaatatttttttattgttataaaagccgcgtaaccgttcatctattacttcttgtactgctttaatttgaaagtgtggaaggagctgcaataacactttttaattcggggatcaaacccaggtcttcaaggtccatagtcacataagacaattctaaagtaagtcaagaaaatatatcaaactctttttaagtcacataacattatcaatagagcactgcttaccctatagaagctataactgctttaaaaacgtttcgtattaaaggttttataaattcgtataaaaaaatatgtcaaaattaattcacataaaaaatgtctatgatttttgtaaattatctgtctgtatacttcaatattatatttagcggagattttctatcgactatggatattaggttctatcgattatcgactataattatatagctactattactatattgcctccgtggcgcagtggtttaggtcgccacgccgctaccactgcgtcgggaggtcgtaggttccattcccacacggaacaattatttgtgcgatccacaaataatagtttcgggactgattgtactttgtgtccgttgtttgtatgtttgtaaaagtcctcgcgacacaagagcatttttcagtgcgggaatagtctttttaacttaaattaataatcaattgagtctattatctgtctattgtcgtatgttattccgattgaacctaccgtcgataatcgatagaattgataattaaaactgtcttcaattaatcaatacgattattaattgatattcctgtttcctctcatagtgagaggagccttgcccagcagtgggacagtgattagctcaaataggtcttcgatatttcatagaactgcaacacattgtattatacactaaacatagttttaaaatacattatttgactataaaaataatatttttaatcatgataaatatgcgttttcatctatgtataatagttaccagttttgtacaaattttcgtaaaatcataacctaattaataacctaactaattagtttaggtttactaaagacagtatcgagtcgaaaatctaatttgtttgcttcaaatgtcaaattgtagttttaaatttcaaactagcgcgtgattgaacgccatatttgtgctatccacaaattgtttcgcgtctggttgtactttgtgtccgttgtttgtatgtttgtaaaagtccccgcgacacaagagcaattcttagtgcgggagttgttatttttagatcaaattaaattgtattttcactttaaatcagcattcaaatatgcgctagtttgttatttgaacaggtttttcagtgattttcaatgattcccaaagcggaattactctttgaataatacatagatttgtttcaaatctggttatactttgtgtccgttgtttgtatgtttgtaaattacagaatatacgcttcctatatcttcccatgtgcagttcccaaacccagttgaaaaattcccaatcggatttattcccactatgaaaaagacattgggtatttgactactagtcaaattactttcgtaataaagatttttgtataaaaatactgctattttaaaattctgatataaaaaaaataaaattactttataaaggaatattttaacatagcttaataatttagggtatacattttaacactttttctttcacatttaacccagtcaagtacccaaacgataatacccgaactatgagacatttgtaaatataacttaattaataacaattaacatttacttagaaatttggactttttatttgtattatattatactagctaattcttccgcgtggactttagtgtcccgtttcaaacaacatttttctctcgcgttgcatgtttaatgtataatagaatacgggaattagtccagtcagtctgcgaccacggcgagtgcaacctgcgccgaaacgttaggcattttaaggtaaaatgcgtgttcgcgttaattcccgtattctattatatattaaacatttttctattactaattcacacttattagttatagcgggatgttatagaacttccacaataattgtagtactcaacacaaaaatattttccaatttgaagcttttatttgaattgaatatgtgtgatagctgtttcaggtctggttgtactttgtgtccgttgtttgtatgtttgtaaaatcacacaatatgctataatagagagagttgcttgtaaaatttgtattacatctatgtaggtcaaaaactagtcttaataatccggatatctaagtaaatgttacgtttttataaaaattcccaataatgggaaaattcccattacacgttattcctagattttctcaagaatattcccaattcgcggaattaagtacatagaagtgacgaattttttaattattttcgttttttttataattattgtgttatataattatcattttaatcgcatattgtatttatagcgcttttagttcaatacgaatatatttttataagaaaatataaagaattaattttt

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