2025-10-15 04:17:58, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_075562877 6438 bp mRNA linear MAM 22-JUL-2025 DEFINITION PREDICTED: Tenrec ecaudatus ATPase copper transporting beta (ATP7B), mRNA. ACCESSION XM_075562877 VERSION XM_075562877.1 DBLINK BioProject: PRJNA1291776 KEYWORDS RefSeq. SOURCE Tenrec ecaudatus (tailess tenrec) ORGANISM Tenrec ecaudatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Tenrec. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_134540) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_050624435.1-RS_2025_07 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.4 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 07/16/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6438 /organism="Tenrec ecaudatus" /mol_type="mRNA" /isolate="mTenEca1" /db_xref="taxon:94439" /chromosome="11" /sex="male" /tissue_type="primary dermal fibroblasts" /dev_stage="adult" /geo_loc_name="USA: Las Vegas, Nevada" /lat_lon="36.107 N 115.143 W" /collection_date="2023-03-15" /collected_by="Allyson Hindle" gene 1..6438 /gene="ATP7B" /note="ATPase copper transporting beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:142461195" CDS 46..4299 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2" /protein_id="XP_075418992.1" /db_xref="GeneID:142461195" /translation="
MKQDFAYDNAGYESSENSVATSTVHIVGMTCQSCVKTIESMVSSIDGLVSVKVSLEQGSAAVRYMPSVVSLQQICYLIEDMGFEASVPEGKAASWPPRPSPVGEALVKLRVEGMTCQSCVNSIEGNLGKLQGVVRAKVSLGNQEAVIAYQPYLIQPEDLRDHVNDMGFEATIKHKAAPLSLGPIDIGRLQSTNPKRLSAPVPQSPRGPEPPGDQGSPSVTLQLRVEGMRCKSCVFNIENNIGRLPGVREIQVSLEHGTARVHLEPSLISPETLQEAIEALPPGNFQVSLPGGSEGSGTECLPGVGPAERQAPGCSQRSEEPGVHRRVTLAIAGMMDASCVQWIKGVLSQREGVRRVSVSLAEGTGSILFHPALLNPEELRAAVQDMGFEVTILSDNSSSNHTGSPGVGNSAVQTPGGTPMSTQAPPDRRSPRSPRPGHSSGSPPSPEVAPQKCFLQITGMTCASCVSNIERSLLKEAGILSVLVALMAGKAEVKYNPEVIQPLEIAQLVESMGFGATVMEDYTGPEGSFELVIRGMTCASCVHNIESKLTRTNGITYASVALATSKAHVKFDPEIIGPRDIVKIIEETGFHASLAPRDPNAHHLDHRLEIKQWKKSFLCSLVFGIPVMGLMIYMLIPSQEAHEAMVLDHNIIPGLSILNLIFFILCTFVQFLGGWYFYVQAYKSLKHGTANMDVLIVLATSIAYAYSLVILVVAIAEKAERSPVTFFDTPPMLFVFIALGRWLEHVAKSKTSEALAKLMSLQATEATVVTLGEDNVIIREEQVPMELVQRGDIIKVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGSTVIAGSLNAHGSVLVTATHVGRDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIISTVTLVVWIIIGFLDFGVVQKHFPGHSTHISQTEVILRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLELAHKIKTVMFDKTGTITHGVPKVTRFLLLVDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTEALGYCTDFQTVPGCGIGCKVSSVDGTLAPKEHLNGVGNGLAEKDAAPETFSVLIGNREWMRRNGLTISSDVSDAMTDHEIKGQTAVLVAIDGVLCGMIAIADSVKQEAVLAVHTLKSMGVDVVLITGDNRKTARAIATQVGIHKVFAEVLPSHKVAKVQELQLQGKKVAMVGDGVNDSPALARADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVWRIRINLVLALIYNLIGIPIAAGVFMPIGIVLQPWMGSAAMAASSVSVVLSSLELKCYRKPDLEWYEVQAHGRLKPLTPSQVSVHIGLDDRLRDAPRPSLWDQVSYVSQVSHTSDRLSRHSATADDSGDKWSLLLTDRDEEEYI"
ORIGIN
gtctcgtctcaaccctctgtgcccacccgtgcctgggaagcggccatgaagcaggatttcgcctatgacaatgcgggctacgaaagcagtgagaacagcgtggccaccagcacggtccacattgtgggcatgacatgccagtcttgtgtcaagaccatcgagagcatggtgtccagcatagacggcctcgtgagcgttaaggtctccctggagcagggcagtgccgccgtgcggtacatgccatcggtcgtgagcctgcagcagatctgctacctcatcgaggacatgggcttcgaagccagtgtccccgaagggaaggctgcctcttggccccccaggccctcccccgtgggagaggccctggtcaagcttcgagtggaaggcatgacctgccagtcctgcgtcaactccatcgagggcaatctagggaagctgcaaggcgtggtgcgtgccaaagtctccctgggaaaccaggaggctgtcatcgcctatcagccttaccttattcagccagaggacctcagggaccatgtcaacgacatgggatttgaagccaccatcaagcacaaggcagcccccctgagcctggggccaatcgatattggacgcttgcaaagcacgaacccaaagaggctttcagctcctgttccccagagtccccgtggtcctgaacccccgggggaccaaggaagccccagtgtcaccctgcagctgagggtagaggggatgcggtgtaagtcttgtgtcttcaacattgaaaacaacattggccgacttcctggtgtccgcgagatccaagtgtccctagagcatggaacggcccgagttcaccttgagccttctctcatctctcccgagactctccaggaggccattgaagctcttcccccggggaacttccaagtttctcttcctgggggctcagaagggagtgggaccgagtgcctgccaggggtcgggcctgccgagcgccaggcccctggctgctcccagcggagcgaggagcctggagtgcacagaagggtgacgctcgccattgcaggcatgatggacgcgtcctgcgtccagtggatcaaaggtgtcctatcccagagggaaggcgtgcgtcgggtctctgtctccctggcagaagggactggcagtatcctctttcaccctgctctgctgaacccagaagagctcagagctgccgtccaagacatgggattcgaggtgaccatcctctctgacaactcttccagcaaccatactggaagcccgggtgttgggaattctgcggtacaaactccaggtggcacaccgatgtctacacaggcgccccctgacaggaggtcccctcggagcccccgccccggccactcgtccggctccccaccatctcccgaggtggctccacagaagtgctttttacagatcacaggcatgacttgtgcctcctgtgtgtccaacatagagcggagcctgctgaaagaagccggtatcctctccgtgctggtggccttgatggccggaaaggcagaggtcaagtataacccggaagtcatccagccactggagatcgcccagctggttgagagcatgggctttggggccacagtgatggaagactacacaggccccgagggcagcttcgagctggttatccgagggatgacctgcgcctcctgtgttcacaacatcgagtccaagctcacaaggacaaacggcatcacctacgcctccgtggccctcgccaccagcaaagcccacgtgaagtttgaccctgagatcatcggtccacgggatattgtgaaaatcatcgaggaaactggctttcatgcttccttggccccgagagaccccaacgctcatcacctggaccacagactggaaataaagcagtggaagaagtctttcctgtgtagcctggtgttcggcatccctgtgatgggtctgatgatctacatgctcatccccagccaagaggcccatgaggctatggtcctggaccacaacatcatccccggactgtccattctaaacctcatcttcttcatcttgtgtacctttgttcagttcctcggggggtggtatttctacgtccaggcctacaagtctctgaagcacgggacggccaacatggacgtgctcatcgtgctggccacaagcatcgcctacgcctactccctggtgatcctggtggtggccatcgcggagaaggccgagaggagcccggtgaccttcttcgacacgccgccgatgctctttgtgttcatcgccctgggacggtggctggagcacgtggccaagagcaaaacctcagaagccctagccaagctcatgtcactccaagccacagaggccaccgtcgtgaccctgggggaggacaacgtcattatcagagaggagcaggtgcccatggagctggtgcagcggggtgacatcatcaaggtggtccccgggggcaagttcccagtggacgggaaggtcctggaaggtaacaccatggccgacgagtccctcatcacaggagaagccatgccggtcaccaagaagccaggcagcacggtgatcgcgggctccctcaacgctcacggctctgtgctcgtgactgccacccacgtgggccgagacaccacgctggcccagattgtgaagctggtggaagaggcccagatgtcaaaggcacccattcagcagctggctgaccggttcagtgggtattttgtcccattcatcatcatcatttcgacggtgacgttggtggtatggattataatcggttttctcgattttggtgttgttcagaaacacttccctggccacagcacgcacatctcgcagacggaggtgatcctccggtttgccttccagacgtccatcaccgtgctgtgcatcgcctgcccctgctcgctgggcctggccacgcccacggccgtcatggtgggcaccggggtggccgcgcagaatggcatcctcatcaaggggggcaagcccctggagctggcgcacaagataaagaccgtgatgtttgacaagacaggcaccatcacccatggggtccccaaagtcacgcgcttcctcctgctggtggatgtggccacgctccctctcagaaaggtccttgctgtggtggggaccgccgaggccagcagcgagcaccccttgggcgtggcggtcaccaagtactgtaaagaggaacttggaacagaagccctgggctactgcacagacttccagacagtcccgggctgtggcatcggctgtaaggtcagcagcgtggatggcaccctggccccgaaggagcacctgaacggagtgggcaacgggcttgccgagaaagacgcggcccctgagaccttctccgtgctgattgggaaccgcgagtggatgaggcgcaatggcttaaccatctccagtgacgtcagtgacgcgatgacagaccacgaaataaaagggcagacagcggtcctggtggccatcgatggtgtcctctgcggaatgatcgccatcgcggactctgtcaagcaggaggcggtgctggctgtgcacacgctgaagagcatgggggtggacgtggttctgatcaccggggacaaccgcaagaccgcccgggccatcgccactcaggtcggcatccacaaggtctttgccgaggtgctgccctcccacaaggtggccaaggtccaggagctgcaactccaagggaagaaggtcgccatggtcggagacggggtcaacgactccccagccttggcccgggccgacgtgggcattgctattggaacgggcaccgacgtggccatcgaggcggccgatgtggtcctcatcaggaatgacctcctcgacgtggtggccagcatccacctttccaagaggaccgtgtggagaatacggatcaacctggtcctggcgttgatctacaacctgattgggatacccattgcggcaggtgtcttcatgcccatcggcatcgtgctgcagccctggatggggtcagcggccatggccgcctcctcggtctccgtggtgctgtcatccctggagctcaagtgctacaggaagccagacttggagtggtacgaggtgcaggcccatggccgcctgaagcccctgaccccatcccaggtcagcgtgcacatcggtttggacgaccgcctgcgggacgccccccggccctcgctgtgggaccaggtcagctacgtcagccaggtgtctcatacctcagacaggctgtcccgacacagtgccacagccgacgacagcggggacaagtggtccctgcttctaacggacagggacgaggaggagtacatctgaaggctccaggcaggtgccgatccagcaggcttgtctccagggagcagctgtgccccgaacacgctgttggcggcccgagggcaccgtgtggcacaacagccagggccagggtggtgtaggcatcaggccatcccggccatccctgtagccatagcccattggccctgcgagcagcatccgtctgaacaggactgacctccctgggccctgctggccccagggcataccgacctggtctcctcctccccttcctcctcctcctcctcagtaactttggcttggacaagaggagagcaaggtcggcctcctcctgggcctcatgtcttccactctggacaactacttgcaaaagacgggggaccctcatcagaaccaaaaactgatccaggcctttcctcaggactcaaaagcatcaggttgggctcttctggtgatgtccccacgcgtgtgagaccacagtttatacctcagctgcacctgttgttgtctgttagcgccacctcctcctcctcctccctctgtgctcggtatccagccgtcctggaggtccctgctgccgtcccccaaacacgctctgtctgtgcacttcctgcccaaggctgtcctctcccacacacgcctgcccggttcactgaggagaggccgcacttcctcaagttaagactcgtctcaaggagtctgggcttcccaacccgggctctggacagtccagacttcctgcgggtgggctgagtccctgtgggaggccttggtggtgctcgacgtgaatgccctttaggggtgcatgcggggtggctggccaggcccccagggagcagggcctaccttgtattctatgaagatgtcccttctcagaagctactagataatgcttgggaggggtgccctggagtcagcagggacatcccagtgagtgagtcatcctgctccactattagccttctccacgtgtgccttaggacagcggtgtccccaaaagagagcctctctttcttcccagggctccaaactggtcccaccatggccaaggcagcaaaatggaaactgacctgaatttgtaaaacgtgggtgtcccgagaggggaagatgatgagccctggaatgagaaactcagaagagccccagagagccctttccagagcctgaggctggagactggcttgtcgctaatgctgtaggccgccatctggaagctggccaccattggtttcacctctgtcagggctgcccttgttttctaagagggaggctaaggtcctaggagtatgccgcctgtaattttcccttttggggtatcattccagtacacccatattccaaaaatgtgagcttgtagggagctttgttgaccagcatggcgcccgagagaacctgttcagagcctcttcaggctttctcgctcttggcgacttcctggtggtggtgacccgccatccgagttgggagagtggaccatgcttcgaccctgaagtcggctggtgattggccagagccacacgggagtggacgggtggaatctgacattacatgcttcagaggcctgtggtcacccacaaaagataacgagactgtgaccgagtgtcagttatatcccaggtgaatgtcaccacttttgatatgttacctctgctcctcaaagcaaactagcaaggtagatctcagtggcccccctttcaggtgagggaacagattccctccgccagtatgtgttgccacgtctgttggctcggaagtcttcaactctgcagatcctcgaagctccgcatgctggataagaaggacgactcaagcaatcagttcttggcccgggaagaccgcagctgcggggctttgtctgtgttgcccgctagtgaggtctcgcgtacctggctgtgtggtttccttttgccatcagttgatgtctgctgagcttcgtcctctaaaagtcaagtgccagcgtggttcgattttgctttttgtcgttttcaagctttctctccctcccacctccttccccctgcactgggccaattatctcctccccattcttccacctgtccagggacacctcgtgtcattacattgtctctacaatgtagtgttttgtcttatgaaaaagcttttagtaccataaatgtatatatttatgggcatgggaat
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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