LOCUS       XM_075298144            4742 bp    mRNA    linear   INV 15-JUL-2025
DEFINITION  PREDICTED: Haematobia irritans copper-transporting ATPase 1 (ATP7),
            mRNA.
ACCESSION   XM_075298144
VERSION     XM_075298144.1
DBLINK      BioProject: PRJNA1289903
KEYWORDS    RefSeq.
SOURCE      Haematobia irritans (horn fly)
  ORGANISM  Haematobia irritans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Haematobia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_134399) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_050003625.1-RS_2025_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/11/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4742
                     /organism="Haematobia irritans"
                     /mol_type="mRNA"
                     /isolate="KBUSLIRL"
                     /isolation_source="Kerrville Colony, in vitro susceptible"
                     /db_xref="taxon:7368"
                     /chromosome="3"
                     /tissue_type="0-1 hour egg"
                     /dev_stage="0-1 hour embryo in egg"
                     /geo_loc_name="USA: Kerrville, Texas"
                     /collected_by="Pia Olafson"
     gene            1..4742
                     /gene="ATP7"
                     /note="copper-transporting ATPase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 27 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:142227920"
     CDS             267..4079
                     /gene="ATP7"
                     /codon_start=1
                     /product="copper-transporting ATPase 1"
                     /protein_id="XP_075154259.1"
                     /db_xref="GeneID:142227920"
                     /translation="

MEEKTPFTSGNNSLQEIELLESKNMATIEEVRLDIVGMTCQSCVRNIETNISSKAGIIKCRVELEENAGYFTYDTSITNPTQIANDVDDMGFDCTYDEKESADSGSGHCVVRVLGMTCQSCVRNIEGNIGTKEGIKAIKVSLEDKKADVEYDSTKLTPDLIAEMIDDMGFDASLIEPTSRSLPDTKSLSSSPIKKSPTKSLDDNNQKVSKSPSKMVESNGHATSIPIENELLSKCFLHIRGMTCASCVAAIEKHCKKIYGIDSILVALLAAKAEVKYNGNAITPESIAKSITELGFPSEIIEEPNSGEAEVEIEILGMTCASCVNKIETHVKRMKGISEACVTLLTKRGKFRYNTEITGPRNICEAIEHLGFQAHLLSGKDKMAHSYLEHKEEIRKWRTAFLISLLFGGPCMVAMIYFMVEMGDKGHAAMCCLVPGLSMENLVMFLLSTPVQFFGGWHFYVQSYKAIKHGTTNMDVLISMVTTISYLYSVGVVIAAVLMEQNSSPLTFFDTPPMLLIFISLGRWLEHIAKGKTSEALSKLLSLKAAEAVLVEISEDFEILSEKVISVDYVQRGDTLKVIPGAKVPVDGKVLYGHSTCDESLITGESMPVAKRKGAVVIGGSINQNGVLLISATHTGENTTLAQIVRLVEEAQTSKAPIQQLADRIAGYFVPFVVVVSSVTLIGWIIAGFIDPSLVPVAMEHKAHMDTNTIVVSYAFKCALSVLAIACPCALGLATPTAVMVATGTGAINGVLVKGATALENAHKVKTVVFDKTGTITHGTPMTSKVIMFVKPAICSLARALTIIGAAESNSEHPIASAIVRFAKDMLSQESLGKSANFQAVPGCGIKVTVSHYENALRQAFNAEKIINFENSYRSHGNNIQKAPIQLDNGVSIAELLPSKSAIQRSQENQQEQHLQLLQLDDDHITTSAEEVVGDVVSILGSEINVLIGNREWMLRNAIQVSSEINNAMAEEESKGRTAVLCALNGQLICMFAVSDMVKPEAHLAVYTLKKMGIDVILLTGDNKNTAATIAREVGINRVFAEVLPSHKVAKIQRIQDAGNRVAMVGDGVNDSPALAQADVGIAISAGTDVAAEAADVVLMRNDLLDVVACLDLSRKTVKRIRYNFLFASMYNLLGIPLASGIFSPFGITLQPWMASVAMAASSVSVVCSSLLLKLYRKPTAAKLRTAEYMEYVATAKEREPDELSLHRGLEDLPRRRSSSSLLSRIFLRSGSVKMDPNEDSLLAGEDIDFIKPKIVKNKQLHDVTELQKL"

     polyA_site      4742
                     /gene="ATP7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

atctgctgggagttggtgtagtgtttggatgtcgtcggggtgaatgttgaaatgttgtttcaaaaaaatacgaaaaaacacaaagaaaattaatgaagtgtaacaaaagtccatgtaaatatattaagaaaaatttaaattttccaatgtgaatcgatatcgcaaattaacgaatgtgaagtaaattttaaagtaaatagaaatttacaattgaagtgtaataacaggcaggcaataaagcaataacaacaagtgtgacgacgacgatggaagaaaaaacgcctttcacttcaggcaataatagcctgcaagaaattgaactactggaaagtaaaaatatggctacaatcgaagaagtacgcttggatatagtgggtatgacatgtcaaagctgtgtacgaaatatagaaacaaatatcagttcaaaggccggaataataaaatgcagagtagaattagaagaaaatgcaggttatttcacttacgacacttccataacaaatcccacgcaaattgctaatgatgtagatgatatgggtttcgattgtacctacgatgagaaggagtcggcagattccggttccggacattgcgtggtacgtgttctgggcatgacctgtcaaagttgtgttcgaaatattgaaggcaatattggaacaaaggaaggtattaaagcgatcaaagtaagtttggaggacaagaaggctgatgtggaatatgacagcactaaacttacaccagatcttatagcagaaatgatagatgatatgggctttgatgcctctttaatagaaccaacatctcgttccttgccagacaccaagtcactctcatcatctccaataaaaaaatctccaacaaaatcgcttgacgacaataaccaaaaggtttctaaaagcccttcgaaaatggtggaatccaatggtcacgctacttctataccaattgaaaatgaacttttgtccaaatgtttcttgcacatacgtggaatgacctgtgccagctgtgtggctgccattgaaaaacattgtaaaaaaatatatggaattgatagtatattggtggcattgttagcggctaaagcggaagtaaagtacaacggcaatgcaatcacacctgaaagcatagccaaatccattacagagttgggatttccctccgagataatagaagagcccaatagtggagaagctgaggtggaaatcgaaatattgggtatgacctgtgcatcatgtgtaaataaaatagaaacacatgttaaaaggatgaaaggcatatccgaggcctgtgttactttactaactaaacgaggaaaatttcgttacaataccgaaatcactggaccccgtaacatatgtgaagccatcgaacatttgggctttcaggctcatcttctctctggcaaagataaaatggctcacagctatttggaacacaaggaagaaatacgaaaatggcgtacagcttttttaatctctcttctatttggtggaccttgtatggtagccatgatttattttatggttgaaatgggcgataaaggacatgctgcaatgtgttgtctagtaccaggattatctatggaaaatttagtaatgttcctattgtcaacgcctgtacaattttttggtggatggcatttttatgtacaatcctacaaggccataaaacatggcaccaccaacatggatgtcctgatatcaatggtaaccacaatttcatatctgtattcggtgggtgtggtaattgccgctgtattaatggaacaaaactcatcgcctttaacatttttcgatactccaccaatgcttttgattttcatttcattgggaagatggctggaacatattgcaaaggggaaaacatcggaagctctatcgaaactgttatcattgaaagctgcggaagcggtgctagtggaaatttccgaagattttgaaatactttctgaaaaagtaatatctgtggattatgtacagagaggtgacacattgaaagttatacccggtgccaaggtgcccgttgatggcaaagtcctctatggacactcaacatgtgatgagtctctgataactggtgaatccatgccagttgcaaagcgaaaaggtgctgtcgtcattggcggttccattaatcaaaacggtgttttattgatatcagccactcacacgggcgagaacactacactggcacaaattgtccgactagtagaagaagcacaaacatctaaagctcctatccagcagttagctgatcgtatagctggatattttgtgccttttgttgtagtagtctccagtgtgaccttaataggttggataatagcgggtttcatagaccctagtctagtaccagtggccatggaacacaaagcccatatggacacaaataccatagttgtaagttatgcatttaaatgtgccctgagcgttttggctatagcttgtccatgtgctttgggcttggcaacaccaactgctgttatggtggccactggtactggggctataaacggtgttttggtgaaaggagccacggcattggagaatgctcacaaagttaagactgttgtctttgacaagactggtacaatcactcacggtacacctatgacttcgaaagtaatcatgtttgtcaagcccgccatatgtagtttagcccgtgcccttacaataattggggctgctgaatcgaatagtgaacatccaattgcttccgccattgtgagatttgccaaagatatgctctctcaggaatccttaggcaaatcagcaaacttccaagctgtaccaggctgtggtatcaaagttactgtttctcactatgaaaatgctcttagacaagcttttaatgcagagaaaataattaattttgaaaatagctatcgttctcatggaaataatattcaaaaggctcccatccaattggataatggagtttcgatagcagaacttttgccctccaaaagtgctattcaacgatcacaagaaaatcaacaagaacaacatttgcaattacttcaactggatgatgatcacataacaacatctgccgaagaagttgttggtgatgttgtttctatactgggtagcgaaatcaatgtacttattggcaatcgagaatggatgctgcgaaatgccatacaagtctcttcggaaatcaataatgccatggctgaagaggaatcgaaaggtcgcactgcagttttatgtgctttaaatggacaattgatatgtatgtttgctgtttcggatatggttaaaccggaggctcatcttgccgtttacacattgaagaaaatgggaatagacgttatactcttgacgggagataataagaatacagcagctactatagcacgagaggttggtataaatcgtgtctttgccgaagttttaccctcccataaagtggccaaaattcaacgtattcaagatgccggaaatcgtgtggctatggtaggtgatggcgtcaatgatagccccgcgttggctcaagcagatgttggtattgctatctcggcgggcaccgatgtagctgccgaagctgccgatgtagtactaatgcgtaatgatcttctcgatgttgtagcctgtcttgatctatcacgaaaaactgttaaacgtatacgctataattttctctttgcaagtatgtacaatctattgggcataccacttgcttctggaatattttctccattcggcattacactacaaccatggatggcctcggttgcaatggctgctagttccgtctcggttgtctgttcctcattactattgaaactatatcgaaaaccaactgcagcgaaattgcgcaccgcagaatatatggaatatgtggccacagccaaagaacgagaacccgatgaattatctctacatcggggattggaggatttaccacgtcgtcgctcaagttcttctttattgtcgcgcatatttttacgttctggtagtgtgaaaatggatcccaatgaagattctttattggctggtgaagatattgattttattaaacctaaaattgttaaaaataaacaattacacgatgttaccgaattgcaaaagttataggttcaatagatcagaaacaaaaacttttgcgtttatatttagacaaaatcacaaggagattgattgttgatcatttgattgttatgtgcatacgtccttcgagtatgtatactgtccgttacgataaaagtacgattccttaattttctatttgtttgttaaatgaatataaatttatgcattagtatcatttttgtttgtttttttattttattaaaatttatttactacgaaatgcgccttcattagaatgtatttataagaccaaaaaacgaaagttctatacataaactgtgaaaactaagtttgatttcatcgaacccccttatatacacaactgtataaatcatttcctaatgatattctaaaaacatatactatataaatatatattttttttgtaaaggaaattgatgaaacatatagaccatgtttgtgaaaatctatttgtaatatataaatttatagaaatcattgtaactaagtgaccaggcattgtgtttttgttttggcaaacatatgctcaaaaatatttctatgtattctataaatcaatatacatatactataaataaaaattatacttttttcctgttattgataattataattatttttatacgaatcattaaatatataaaaatgaccccatataaccagaaa

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