2025-10-15 04:19:00, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_075199066 4323 bp mRNA linear VRT 13-JUL-2025 DEFINITION PREDICTED: Mixophyes fleayi ATPase copper transporting beta (ATP7B), transcript variant X3, mRNA. ACCESSION XM_075199066 VERSION XM_075199066.1 DBLINK BioProject: PRJNA1289907 KEYWORDS RefSeq. SOURCE Mixophyes fleayi (Fleay's barred frog) ORGANISM Mixophyes fleayi Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Myobatrachoidea; Limnodynastidae; Mixophyes. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_134403) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_038048845.1-RS_2025_07 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.4 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 07/11/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4323 /organism="Mixophyes fleayi" /mol_type="mRNA" /isolate="aMixFle1" /db_xref="taxon:3061075" /chromosome="2" /sex="male" /tissue_type="muscle" /dev_stage="juvenile" /geo_loc_name="Australia: New South Wales" /lat_lon="28.37763 S 153.06856 E" /collection_date="2019-02-23" /collected_by="Laura Grogan (The Frog Research Team)" gene 1..4323 /gene="ATP7B" /note="ATPase copper transporting beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:142141009" CDS 146..4210 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X2" /protein_id="XP_075055167.1" /db_xref="GeneID:142141009" /translation="
MMPRRTFLEDEEEEEVRLLRTEEEYVKKPSANLSPHRYVSKTSSYGVSKSNHAPASTKPRFAFDNRGYEGSLDNLTHSSSDVSSLVVGIEGMTCQSCVQSIEGRISKIPSIIRIKVYLEQSNATIYFIPSEITPQKICEEIEDMGFDANIQECKETSTFTKGMQYREDLVKIRVEGMTCQSCVNTIEGKIGKIQGVEKIKVSLTSQEAVIMYYPQYIHPEELRKHIDDMGFVASVKSKPDPSKIGTIDIERLQTLSTQHKVTNSGGAAIAGSKEEITIHIDGMHCKSCVHSIEGSISDLPGVGSIKVSLENKTAVICFLKSITDLLTLKKTIEELPPGNFKVTLPVGGDLSPTSRSKSNLHLSYKQNQLAATDKAVISIGGMTCGSCVSSIESMISQRKGIQSISVSLPGGVGTIYYSHTETNSEELRTTIEDMGFDATLVSDSPLSVSNNQPSSTEPEVKKNSPDMTKTLNLHQDYILDVLPKKPDPDIPLRDNTTAQKCVLQITGMTCASCVSNIERNLKKKDGIISVLVALMAGKAEVKYIANIIEPSEIAQLIENLGFGAVVLDGCTATHGSIELVIIGMTCASCVHNIESRLMRTRGILQASVALATCKAQVKFDPEMIGLRDIIQVIEVIGFQASLPKRDLTAHNLDHKQEIRQWRKSFLFSLIFGIPVICIMIYMLFAHNNHYGPSAMDTNIIPGLSITNLLFFILCTLVQSFGGWYFYVQAYKSLKHKATNMDVLIVLATTIAYIYSVCILIVAIAEESQQSPETFFDTPPMLFMFIALGRWLEHIAKSKTSEALAKLISLQATEATVVTLGSNHSVVREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGTSMADESLITGEPMPVRKKPGSMVIAGSINAHGSVLVEATHVGSDTTLAQIVKLVEEAQMSKAPIQQLADKISGYFVPFIICVSILTLMAWMTVGFVNFDVIIKYFPSYSKIISKAEVIIRVAFQTSITVLSIACPCALGLATPTAVMVGTGVAAQNGILIKGGEPLEMAHKINTVMFDKTGTITQGVPKVMRVLLLGDVVRMPLKRMLAVVGTAEASSEHPLGMAVTKFCREELGTESLGYCTDFQAVPGCGIRCKVNNVESVLMQSEEGLNEQNIYKSGFTHPQEDTFLIMAPDLQGAAAPEPHSVLIGNREWMRRNGLHISSDVDEAMTDHERKGQTAVLVAIDGALCGMIAIADMVKQEAALAVHTLKAMGVDVVLITGDNRKTAKAIATQVGIRKVFAEVLPSHKVAKVQELQNEGKRVAMVGDGVNDSPALARADIGIAIGTGTDVAIEAADIVLIRVSFCHWGWCYSHGWGQQQWQLPLSLWCYLHCS"
ORIGIN
tgcatgttataataaaggcatcacaggctggctcctagtcatcacaaagtttatgagtccatagtccaagtctctgcatacaacactgaatggcagaagtgcacaacttgtcctggagggagctcagagggaactgcctgtaaagatgatgcctagaagaacatttctggaggatgaggaggaggaggaagtacgattattacgtactgaagaggaatatgtaaagaaacctagtgcgaatctttcacctcaccgctacgtgagcaagacttcaagttatggtgtttccaagagtaaccatgcaccagcatcaacaaaaccaagatttgctttcgacaacaggggctacgaaggtagcctagataaccttacccactcctcttctgatgtcagttccttggtggtgggaatagaaggcatgacctgtcaatcgtgtgttcagtccattgagggaaggatctccaaaataccaagtattattagaataaaggtgtatctggaacaaagcaatgccacaatatacttcataccttcagaaataacaccacaaaagatttgtgaggaaattgaagatatgggttttgatgcaaacatacaagagtgcaaagagacctcaacctttaccaaaggcatgcagtatagagaagatcttgtaaagataagagtagagggcatgacgtgtcagtcttgtgtcaacaccattgaagggaaaattgggaaaattcagggagtagagaaaataaaagtgtctcttacaagccaggaagctgtgattatgtattatccacagtacattcatccagaagagctgaggaaacacatagatgatatgggatttgtggcatcagtcaaaagcaagccagatccatcaaagattggaacgattgacatagagcgtttgcagactctctctactcaacacaaggtcacaaactctggtggagctgcaatagcaggcagtaaagaggaaataactattcatatagatgggatgcattgtaaatcttgtgtgcacagtatagaaggatccatatctgacctccctggtgtagggagtatcaaagtctcccttgaaaacaaaactgctgtaatttgttttctcaaaagcatcactgacctgttgactttaaaaaaaacaattgaagaacttcctccaggaaattttaaggttacccttccagtggggggagatctgagccctacatcacgatcaaagtctaaccttcacttatcctataaacaaaaccagcttgcggctacagacaaggctgttatcagcatcggaggaatgacctgtggatcctgtgtctcatcaatcgaaagcatgatctcacaaaggaaaggcatacagtccatatcggtttcattacctggaggggtaggaacaatttactatagtcatacggaaacaaactctgaggaattaagaacaaccatagaagacatgggctttgacgctacacttgtttctgattccccattgtctgtcagcaataaccagccaagctccacagagcctgaagtaaagaaaaattccccagatatgaccaagactttaaatcttcatcaagattatattttagatgttctccctaagaagcctgacccagacatccctctgagagacaacactacagctcagaaatgtgttttacagatcacagggatgacgtgcgcttcttgtgtgtccaacattgagaggaacctgaagaaaaaagatggtataatttcagtgctagttgcacttatggctggtaaagcagaggtcaagtacatagcgaacataattgagccaagtgaaattgcacaacttattgaaaacctggggttcggagcagtggtcttggatggttgcacagcgacacatggcagcattgagcttgttatcatagggatgacctgcgcatcatgcgttcacaacattgagtcccgactgatgagaacaaggggcattctgcaggcctctgtggctcttgctacctgcaaagctcaagtcaagtttgatccagaaatgattggtctaagagacatcatccaagttattgaggtgattggttttcaagcttccttacctaaaagagatctaacagctcacaacctggatcataaacaggaaataagacagtggagaaagtccttcttgttcagtcttatatttgggatccctgtcatctgcattatgatctacatgttatttgctcacaataatcactatggcccttcagcgatggacacaaacattatccccgggctatccatcacgaacctcctcttctttatactgtgtacactagtccagtcctttggaggatggtacttttatgtccaggcttacaagtctctgaaacacaaagcaaccaacatggacgtactcatcgtcctagccaccaccatcgcctacatttactcggtgtgtatcctgattgtggccattgcagaggagtctcagcagagcccagagaccttctttgatacaccccctatgctgttcatgttcattgctctggggagatggctggagcacatagcaaagagtaaaacatcggaggctcttgccaagctcatatccttgcaagctaccgaggcgacagtagtaactcttggatccaatcactcagttgtgagggaagagcaggtggctgtggaactggtccagagaggagatattgtgaaggttgtacctgggggcaagtttccagttgatgggaaagtaattgaagggacatctatggcggatgagtctcttattacgggtgagcctatgcctgtcaggaagaagccgggaagcatggttattgccgggtccattaatgctcatggttctgtgcttgtggaagcaactcatgttggctctgacaccacattggcacaaatcgttaagttagtggaagaagcgcaaatgtccaaggctccgatccaacagttggcggataaaataagtggatactttgtcccgtttataatttgcgtttccattttgacactgatggcctggatgacagttggctttgtgaattttgatgtcataattaaatattttcctagttacagcaaaataatctcaaaggctgaagtgataattcgggtggcgttccagacttccatcactgtgctgtctattgcctgcccttgtgctttaggtctggctacacccactgcggtgatggtgggcactggagtggctgcacaaaacggtatcctcatcaaaggtggagaacctctggagatggcgcacaagataaatacggtaatgtttgataaaactgggaccataacacaaggggtccctaaagtcatgagggtcctgctattgggtgatgtagtcaggatgcctctgaaaaggatgctggccgtggttggaaccgcagaggccagcagtgagcatcccctggggatggcagtcacaaaattctgcagagaggagctgggtacagaatccctgggatattgtacagatttccaggctgtcccaggatgtgggatccgttgtaaagtgaacaatgtagaaagtgtcctgatgcagagtgaagagggtttgaatgagcagaatatctacaagagtggcttcacccatccacaagaagacacatttttgatcatggcaccagacctacaaggtgccgcagccccagaacctcactctgttttaatcgggaaccgggaatggatgagacgcaacggcttacacatatccagcgatgtggatgaggcaatgactgatcatgaaaggaaaggacagacagcagtgctagtagctatagatggtgcattgtgtggaatgatcgctatagcggacatggtgaagcaggaggcagctcttgctgtgcacacactgaaagccatgggagtggacgtggtactgatcactggggacaaccggaaaactgccaaagcaattgctacccaggttgggatcaggaaggtgtttgcagaagtccttccctctcacaaggtggccaaagtccaagaactacagaacgaggggaagagagtggccatggtgggagatggcgtcaatgactccccagcgctggccagagctgatatcggtatcgccattggaactggaactgacgtggccatcgaagctgcagatatcgtcctcatcagagtgtctttctgccactggggttggtgttacagccatggatggggtcagcagcaatggcagcttcctctgtctctgtggtgttatcttcactgcagctgaagtgctacagaaaaccagactcagacagatatgaagcacaagcccagggcctcatgaagccactcaccccatcacagataagtgttcatattgggatggatgataggagaagg
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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