LOCUS       XM_075139692            6661 bp    mRNA    linear   VRT 11-JUL-2025
DEFINITION  PREDICTED: Calonectris borealis ATPase copper transporting beta
            (ATP7B), mRNA.
ACCESSION   XM_075139692
VERSION     XM_075139692.1
DBLINK      BioProject: PRJNA1289127
KEYWORDS    RefSeq.
SOURCE      Calonectris borealis (Cory's shearwater)
  ORGANISM  Calonectris borealis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes;
            Procellariiformes; Procellariidae; Calonectris.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_134312) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_964195595.1-RS_2025_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/10/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6661
                     /organism="Calonectris borealis"
                     /mol_type="mRNA"
                     /db_xref="taxon:1323832"
                     /chromosome="1"
     gene            1..6661
                     /gene="ATP7B"
                     /note="ATPase copper transporting beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 long SRA reads, 8 Proteins, and 76% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:142077701"
     CDS             432..4838
                     /gene="ATP7B"
                     /codon_start=1
                     /product="copper-transporting ATPase 2"
                     /protein_id="XP_074995793.1"
                     /db_xref="GeneID:142077701"
                     /translation="

MMKFVCLPTDLKRSLWPLPWKALSNSDSPPGCELEPTMKHNFAFDNMGYEESFETVPSPSSQEHTVAVNIVGMTCQSCVQSIEGRISKVKGIASIKVSLEQNNAVITYLQSEISPEQICQEIQDMGFDANIAEERLTTATVNLSCLREAVVKLRVEGMTCQSCVTNIEGKIRKLHGVTKIKVSLGNQEAIVAYYPYIIQPEDLKSHISNLGYECTIKSKSAPLKLGVLDLGRLQNTNPKGTPASLKSDGMDPAVAKMSGTATVAVRIEGMHCKSCVRNIEGNISDLPGIQSIKVSLEHKHAVVQYSPNLITLSALQQAIESLPPGNFKVCLLNGLEVNKGASPSPTLLCDLFREPLQDTTRTAVIRIDGMTCNSCVQSIEGTISQRQGVQCISVSLADRTGTIHYDPAVTNGEELKIAIEDMGFDASVLTDTAAGERRHQPDASNVAVQPQAPEPPRQACASDALPDSPHLDGPNQPSGVTAEKCFLQITGMTCASCVSTIERNLQKEDGIVSVLVALMAGKAEIKYKPEFIQPLEIAQLIQNLGFEATIIEDHAETEGTVELLITGMTCASCVHNIESKLMRTNGIFYASVALATCKAHIQFDPEITGPRDIIKIIEEIGFRASVARRVPNAHNLDHKKEIRQWRKSFLCSLLFGIPVLILMIYMLIPDGAHHGSMVLEQNLIPGLSILNLLFFVLCTFVQFLGGWYFYVQAYKSLKHKTANMDVLIVLATTIAYVYSCVILMVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKTSEALAKLISLQATEATVVTLGPDHSIVREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGSSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIISTVTLIVWITIGFINFDVIQKYFPNQNKHVSKAELILRFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITCGVPKVMRVLLLGDTDVLSLKKVLAVVGTAEASSEHPLGVAVTKYCKEELGTQSLGYCTDFQAVPGCGISCKVGGVEAVLGMAEEGLDKLDTNSSRDSSAPLGDKTLIMLSGSHGPSASHTYSVLIGNREWMRRNGLHIANDVNDAMTDHETKGQTAILVAIDGVLCGMIAVADTVKQEAALAVHTLKNMGIDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVQELQNGKRKVAMVGDGVNDSPALARADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLILALIYNLLGIPIAAGVFMPVGLVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDTESYEAQAQGRMKPLTPSQISVHIGMDDRRRDSSRLAPWDQISQVSLSSLTSDKLPRRNGFVEEEGDKWSLLMNGGDEEQYI"

     polyA_site      6661
                     /gene="ATP7B"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ctccgcggcggcgggtctcctcaggggacagcgcctcccgcccgtccctccgggcagagcccaggcccggggcaccgcgacccctgcggcggggggcatacggtgtggtgtgtgaggagcagaggcctctctgggacaggggctttcttctcctgcatccaccacgttcaaattttgtctctgtaagtactggcccctctctttggccagaagaggatggtattcgatgtcttgtcttccagccctgcgttaatctccagcttaacatttgcctgagaagcatgtgggatgtttgcagaagagatctttgctggattcacatctctcaactcaaaacacctctcttgtaatgtcaacatttgaagataattgcctgggttcagagaagagacacagttcttctagggaacaaggagtccggtctattttagatgatgaaatttgtgtgtctccccacagacttgaaaaggagcttatggccactcccttggaaggctttgtccaacagtgattctcctcctggctgtgagctggagcctacaatgaaacacaattttgcttttgacaacatgggctacgaggagagctttgaaactgtgccctctccatcttcccaagaacacactgtggcagtcaacattgtgggaatgacttgccaatcttgtgtgcagtcgatcgaaggccgaatttcgaaggtgaagggcattgcgagtattaaagtctcccttgaacagaacaacgctgtaataacgtatctgcagtcagaaataagtcctgaacagatttgccaggaaattcaggatatgggctttgacgccaacatagcagaagagaggttgacaacagcgactgtaaatttgtcgtgcttgagagaagcagtagttaagcttcgggtagaaggcatgacatgccagtcctgtgtcactaacatcgaaggaaagattaggaaactgcacggtgtgacgaaaatcaaggtgtcactaggtaaccaggaagcaattgttgcctactatccttatatcattcagcctgaggacctcaagagccatatcagtaacctggggtatgaatgcaccattaaaagtaaatcagcccctttgaagcttggtgtccttgatctcgggcgcctgcagaatacaaaccccaaggggacaccggcaagtctcaagagtgatgggatggatccagcagtcgccaagatgagtggcacagctacggtggctgtacggatagaaggcatgcactgcaaatcctgtgttagaaacattgaaggaaatatatcagatcttcctggcatacaaagtattaaagtgtctttggagcataaacatgctgtggtacagtatagcccaaatttaattaccctgtcagctttgcagcaagctattgaatcccttccacctggaaactttaaagtatgtctccttaatggtttggaagtaaataagggagcatctccatcacctactttgctatgtgatctcttcagagagccgctgcaagacacgacacgcacagctgttattaggattgatggcatgacctgcaattcctgtgtacaatccatagaagggaccatatcacagagacaaggagtgcaatgtatatcagtttctctagctgacagaactgggaccatacattatgatccagctgtcactaatggagaagagttaaaaattgccatagaagacatggggtttgatgcttctgtgctgacagataccgccgccggagaacggaggcaccagcctgatgccagcaatgttgccgtgcagcctcaagctccagagcctcctcgccaagcctgtgcctcagatgctcttccagacagtcctcaccttgatgggccaaaccagcccagcggagtgacagctgaaaagtgttttttacaaatcacaggcatgacctgtgcatcctgtgtgtctaccattgaaagaaatttgcagaaagaagatggaattgtttcagtgttggtagcactgatggcaggtaaagcagagataaaatacaagccagaattcatacagcctcttgaaatagcacagctgatccagaacttgggttttgaagctaccatcatagaagatcatgcagaaacagaaggaactgtggagcttcttattacagggatgacttgtgcttcttgtgttcacaatattgaatccaaactcatgagaacaaatggcatattctacgcctcagttgcacttgctacttgcaaagctcacatccagtttgatcctgaaattactggacctcgagatattataaaaataattgaggaaattggctttcgtgcttctgtggctagaagagttccaaatgcacataacctggatcataaaaaggagatacggcagtggaggaaatctttcttgtgcagcctactgtttggtatccctgtcttaatcctaatgatttatatgctaatacccgacggtgcacaccatgggtctatggtgctggaacagaatctcattcctggactatctattttaaatcttctcttctttgtcctgtgcacttttgttcagtttcttggtggatggtatttttatgtacaagcttacaaatcactgaagcacaagacggccaatatggatgtgctcatcgtactggccacgacgattgcttatgtgtattcgtgtgtcatcctgatggtagcgataattgaaaaggcagagaaaagccctgtcactttctttgacactcctccgatgctgttcgtgttcattgcccttggaaggtggctggaacacatagcaaagagtaagacctcagaagctcttgctaaacttatatctcttcaagccacagaagccactgtggtgactcttggacctgaccactctatcgtcagggaggagcaggtagctgttgaactggttcaaaggggtgatattgtaaaggttgttcctggtggaaagttcccagtggatggaaaggtcatcgaaggaagttctatggcagatgagtcactcattaccggggaagctatgccagtcactaaaaagcctgggagcacagtgattgctggttctataaatgcacatggctcagttcttgttaatgcaactcatgttggtaatgataccactctggcacaaatcgtgaaattggtggaagaagctcaaatgtcaaaggcacccatccagcaactggcagataagtttagtggatattttgttccatttatcatcatcatttcaacagtgacattgatagtatggatcacaattggttttataaattttgatgttattcaaaaatattttcctaatcagaacaaacacgtttcaaaagctgaactaatactgaggtttgcatttcaaacctcaatcactgtgctgagcattgcatgcccctgttctttaggcttggctacccccacagctgtgatggtgggcacaggagttgctgcgcagaatggtattctcatcaaaggcggaaaacccctggagatggcacacaagatcaagactgtgatgtttgataaaactgggaccatcacctgtggagttcctaaagtcatgagggtgcttttgctgggagacacggatgtgctctctctgaagaaggtactggcagtggttggcactgcagaagccagcagcgagcatcctttaggagtggcagtcactaaatactgcaaagaggagcttggcactcagagcctgggatactgcactgacttccaggcagtcccgggctgtggcatcagctgcaaagtcggaggtgttgaggctgtcctgggcatggccgaggagggtcttgataagctggatactaacagcagcagggacagcagtgctcctctgggagataagacgctgatcatgctctctggatcacatggtccatcagcttctcatacatactcggtgttgattggaaatcgtgagtggatgcgacgcaatggcttgcatattgcaaatgacgtaaatgatgcgatgacagaccatgaaacgaaaggacaaactgccatactagtggctatagatggcgtgttgtgtggaatgatcgcagtagcagacactgtcaagcaggaggcagcccttgctgtgcacacgctgaaaaacatgggaatagatgtggtgctgataacgggggacaacagaaaaactgcaaaagccattgctactcaggttgggatcaaaaaagtctttgctgaggttcttccttctcacaaggttgcaaaggtccaggagctccaaaatgggaagaggaaggttgcgatggttggtgatggagtcaatgattcccctgcactagccagagccgacgttggaattgcaattggaacgggcaccgatgttgccattgaagcagcagatgttgttcttatccgaaatgacttgctggatgtagttgccagtattcacttatcaaagagaacagttcgaagaatacgaataaatctgattcttgccttaatttataatctgcttggaatacccatagcagcaggtgtgttcatgcctgttggcctcgtgcttcagccttggatgggatcagctgcaatggcagcttcttctgtgtctgtcgtgctgtcttccctgcagctgaaatgttataagaaaccagacacagaaagttatgaagcacaagctcaaggccgcatgaagccacttaccccttcccagatcagtgttcatattggaatggatgataggaggagggattcatccagactggctccttgggatcagattagccaagtgtctctttcttccttgacttcagacaagctgccgagacgtaatggttttgttgaggaggaaggggacaagtggtcattgctcatgaatggaggagatgaagaacagtacatctgaagcactgtattcttagtccaggaggaagcgttcctcctacccagagctgggagggactgacttatgtcatcaagagcgtcaaggttgtgagtgaagtcattccttcagctcagaaaacaattgcaacttagctcaatgttgggttgtatggattgtggatttttttcaggtcatcagttatttctagtcacggaaagaatctgtggctctataatgaactggctcctttgcacacagaaattagtgacataatgtaaaattgtaattttcagagtctaaaagagtttctcccttttagactgtttgcttggcaccaaatttcatactttcctctctttctaactttattctttcaagagcacgtgaagcaaaagtattttcagagctgccaaatcttaatttctgtgtccaagtgaaaatagccacggcataaggagctctgtggttggaaattgtatttttacacataatcctaattagtcacgtcactgtgagagcactttttatttaggattcacgtgtgtcttcttggaccaaaaatgctttggtgtttcactgactatagctctctgaaaggtctctttcaaagattttcacttgctttcaggtatcgcatccttttgatgcacgtttccattgctaaacttgttctgtcattctcactgctctcctagattttctcttttgttccatatgggctctttttttcccctttctttgcacgagatgtcttctgtgagttattattatgtttacagatattcctgtttgggaccaactcctttaagtcaccaggaacttttctgttcctattgaagtccacaaaggcagagcaattcctggtccaagttagcataccattttcctgtggataccttgtgggaccccgtgaagctcctgacaattgggcagttgtctgtctcttatgccagtgtgagcgaaggtggtatttaccatcgtgtgactgaaagcagaactagcactggttcatgctggtgactccagcatagctgaatggagtgagtttattgcataagttaaccccagcttgcttgttgcttaaaatggagccaaaagtttaaatggtaaaggtggaaaaatgaccttaaaatgtggggcttctatttgctatcatataaataacgttttctgatgacaaaaggacttgaactaagaagatttgtaatagcttgaattttaatgcaaatttgtattcatgttttgaattggttttaattttcctctttgctctagttccatgagaaatcaaggtgctgaacaacccttttttcactttaacgtctttaccaaagcttgcagtaactttatcactgtgaatgtcaaattcatcccttaacagttgggacagtaggaatcaacagctttggtgcactgaatccagtcccggggtgctgcattgctcaactgtggggctctgaagcaagcagtccggagttttatagtctaatctaaaaagtgaaagatcgagaattactgtgctaagcaatgtgaaagaaccacttaatttcactgacttaaatacagaaccgtttccaacatgggtccaaatcctgctcctcctaatgtaaaaatgaaaaacaagtcagagaggaaaagaacaaatcagttttaaaactgtaaaatctctttacatgtgtagagatcactttcacagcacacacacttttcaaacatgccgtaggttcctatacatgtccctgtggggaagatggtctactgtttcactgttttatgttttcttacgagtgcttacagtaaaaatattgtgtatttttaaaacaaacaaacaaacaaacaaataa

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