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2025-09-14 17:58:33, GGRNA.v2 : RefSeq release 231 (Jul, 2025)

LOCUS       XM_075046293            5016 bp    mRNA    linear   VRT 04-JUL-2025
DEFINITION  PREDICTED: Buteo buteo ATPase copper transporting beta (ATP7B),
            transcript variant X5, mRNA.
ACCESSION   XM_075046293
VERSION     XM_075046293.1
DBLINK      BioProject: PRJNA1284932
KEYWORDS    RefSeq.
SOURCE      Buteo buteo (common buzzard)
  ORGANISM  Buteo buteo
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae;
            Buteo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_134184) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_964188355.1-RS_2025_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/02/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5016
                     /organism="Buteo buteo"
                     /mol_type="mRNA"
                     /db_xref="taxon:30397"
                     /chromosome="14"
     gene            1..5016
                     /gene="ATP7B"
                     /note="ATPase copper transporting beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:142039585"
     CDS             711..4802
                     /gene="ATP7B"
                     /codon_start=1
                     /product="copper-transporting ATPase 2 isoform X3"
                     /protein_id="XP_074902394.1"
                     /db_xref="GeneID:142039585"
                     /translation="
MMKLVCLPADLKRSLWPLPWKALSNTDSPPGCELEPTMKHNFAFDNMGYEEGFETVPSPSSQEHTMAVNIVGMTCQSCVQSIEGRISKVKGIVSIKVSLEQNNAVIKYLQSEISPEQICQEIQDMGFDANIAEERLTPGTVSLPCLREAVVKLRVEGMTCQSCVTNIEGKIRKLHGVAKIKVSLDNQEAIIAYYPYIIQPDDLKSHISNLGYDCTIKSKSAPLKLGVFDLGRLQSANPRETPASLESDGVDPPVTKMSGTATVTVRIEGMHCKSCVRNIEGNISDLPGIQSIKVSLEHKRAVVQYSPNLITVSALQQAIESLPPGNFKVRLINGSEVNKGASPSPALLCDLFREPLQDMTCMAVIRIDGMTCNSCVQSIEGTISQRQGVQQIAVSLADRTGNIHYDPAVTNGEELRAAIEDMGFDASVLKDTAAGEGRHQPDASNAARQPRAAEPPRQGCASDALPDSPHLDGPNQASGATAEKCFLQITGMTCASCVSTIERNLQKEDGIISVLVALMAGKAEIKYKPEFIQPLEIAQLIQNLGFEATVIEDHAETEGNVELLITGMTCASCVHNIESKLMRTNGIFYASVALATCKAHIQFDPEITGPRDIIKIIEEIGFHASVARRVPNAHNLDHKKEIQQWRKSFLCSLLFGIPVLILMIYMLIPDGEHHGSMVLEQNLIPGLSILNLLFFVLCTFVQFLGGWYFYVQAYKSLKHKTANMDVLIVLATTIAYVYSCVILMVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKTSEALAKLISLQATEATVVTLGPDHSIVREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGSSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIISISTVTLIAWITIGFINFDVIQKYFPNQNKHVSKAELILRFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITCGVPKVMRVLLLGDTAVLSLKKVLAVVGTAEASSEHPLGVAVTKYCKEELGTQSLGYCTDFQAVPGCGISCKVGGVEAVLGMADEGLDKLDANRSRDSSAPLGDNTLIALPESHGPSASHTYSVLIGNREWMRRNGLHIANDVNDAMTDHETKGQTAILVAIDGVLCGMIAIADTVKQEAALAVHTLKNMGIDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVQELQNGRRKVAMVGDGVNDSPALARADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIRLSKRTVRRIRINLILALIYNLLGIPIAAVIRSQTQKVMKHKLKAA"
ORIGIN      
atctctttcatgtcacagccacctgttaattttgaggtcttgaagcttagggatgtttttgaaggtcaccctgtgtcttcttcatcagaagagtgctggttggaaaatgctgaatcgttagtttatttggccattgccatagcccgaagcagagacgcaaaagtctctgctgtagtgggagtgagaagagttcagcttaagtaatggttatttgattctgacttgcctggattgagttttccacttataaggactcaccatgtgggaatagaattggaaatgtgtcaggccctcaaagttagagttttattggttattttactggtgtttgtaattaaatctcttgactgtcttaactactactgactataggttttaccagggcatctctgcctttatgtaagcaggtaaattggaagagttctgttgggaggtccagcaagcatgacctaacatttcatttctgaaccaacagccctcataagtagggtgccacaggcactggtttctctcccttaatcttttttcctcttccctgacagagcagttgcctgagaaccatgtgggatgtttgcagaagagacctttgctggattcacatctctcaactcaagacacttctgttgtaatgtcaatgtttgaagataattgcctggtttcagagaagaggcacggttcttctagggcacaagacatccagtctattttagatgatgaaacttgtgtgtctccctgctgacttgaaaaggagcttatggccactcccttggaaggctttgtccaacactgattctcctcctggctgtgagctggagcctacaatgaaacacaattttgcttttgacaacatgggctatgaggagggctttgaaacagtgccctctccatcttcccaagaacacaccatggcagtcaacattgtgggaatgacttgccaatcttgtgtgcagtcgatagaaggccgaatttccaaggtgaagggcattgtgagtattaaagtctcccttgaacagaacaatgctgtaataaagtatctgcagtcagaaataagtcctgaacagatttgccaagaaattcaggatatgggttttgatgccaacatagcagaagagagactgacaccagggactgtaagtttgccgtgcttgagagaagcagtagttaaacttcgggtagaaggcatgacatgccagtcctgtgtcaccaacattgaaggaaagattaggaaactgcatggtgtggcgaaaatcaaggtgtcgcttgataaccaggaagcaattattgcttactatccttacatcattcagcctgatgacctcaagagccatatcagtaacctggggtatgactgcaccattaaaagtaaatcagcccctttgaagcttggtgtgttcgatctcgggcgcctgcagagtgcaaaccccagggagacaccagcaagtcttgagagtgatggggtggatccaccggtcaccaagatgagtggcacagctacagtgactgtacggatagaaggcatgcactgcaagtcctgtgtcagaaacattgaaggaaatatatcagatcttcccggcatacaaagtattaaagtgtctttggagcataaacgtgctgttgtacagtatagcccaaatttaattaccgtgtcagctctgcagcaagctattgaatcccttccacctggaaactttaaagtacgtctcataaatggttcagaagttaataagggagcatctccatcacctgctttgctatgcgatctcttcagagagccgctgcaagacatgacatgcatggctgttattaggattgatggcatgacctgcaattcctgtgtacagtccatagaagggaccatatcacagagacaaggagtgcaacaaatagcagtttctctagctgacagaactgggaacatacattatgatccagctgtcactaatggagaagagttaagagctgctatagaagacatggggtttgatgcttctgtgctgaaagataccgccgctggagaaggtaggcaccagcctgacgccagcaatgctgccaggcagcctcgagctgcagagcctcctcgccaaggctgcgcctcggatgctcttccagacagtcctcaccttgatgggccaaaccaggccagtggagcgacggctgaaaagtgttttctacaaatcacaggcatgacctgtgcgtcgtgtgtgtctaccattgaaagaaatttgcagaaagaagacggaattatttcagtgttggtagcactgatggcaggtaaagcagagataaaatacaagccagaattcatacagcctcttgaaatagcacagctgatccagaatttgggttttgaagctaccgtcatagaagatcatgcagaaacagaaggaaatgtggagcttcttattacagggatgacttgtgcttcttgtgttcacaatattgaatccaaactcatgagaacaaatggcatattctacgcctcagtagcacttgctacatgcaaagctcacatccagtttgatcctgagattactggacctcgagatattataaaaataattgaggaaattggctttcatgcttccgtggctagaagagttccaaatgcacataacctggatcataaaaaagaaatacagcagtggaggaaatctttcttgtgcagcctactgtttggtatccctgtcttaatcctaatgatttatatgctgatacctgacggtgagcaccacgggtctatggtgctggaacagaatctcattcctggattatctattttaaatcttctcttctttgtcctgtgcacttttgttcagtttcttggtggatggtatttttacgtacaagcttacaaatcactgaagcacaagacagccaatatggatgtgctcatcgtactggccacgacaattgcttacgtgtattcttgtgtgatcctgatggtagcgataattgaaaaggcagagaaaagccctgtcactttctttgacactcctccaatgctgtttgtgttcattgcccttgggagatggctggaacacatagcaaagagtaagacctcagaagctcttgctaaacttatatctcttcaagccacagaagccactgtagtgactcttggacctgaccactctatcgtcagggaggagcaggtagctgttgaactggttcaaaggggtgatattgtaaaggtagttcctggtggaaagttcccagtggatggaaaggtcattgaaggcagttctatggcagatgagtctctcattactggggaagctatgccagtcactaaaaagcccgggagcacagtgattgctggttctataaatgcacacggctcagttcttgttaatgcaactcatgttggtaatgataccactctggcacaaatcgtgaaattggtggaagaagctcaaatgtcaaaggcacccatccagcaactggcagataagtttagtggatattttgttccatttatcatcagcatttcaacagtcacattgatagcatggatcacaattggttttataaattttgatgttattcaaaaatattttcctaatcagaacaaacacgtttcaaaagctgaactaatactgaggtttgcatttcaaacctcaatcactgtgctgagcattgcatgcccctgttctttaggcttggctacccccacagctgtcatggtgggcacaggagttgctgcgcagaatggtattctcatcaaaggcggaaaacccctggaaatggcacacaagatcaagactgtgatgtttgataaaactgggaccatcacatgtggagttccaaaagtcatgagggtgcttttgctgggagacacagctgtgctctccctgaagaaggtactggcggtggttggcactgcagaggccagcagcgagcatcctttaggagtggcagttactaaatattgcaaagaggagcttggcactcagagcctgggatactgcactgacttccaggcggtcccaggctgtggcatcagctgcaaagtgggaggcgttgaggctgtcctgggcatggctgatgagggtctcgataagctggatgctaacaggagcagggacagcagtgctcctctgggagataacacgctgatcgctctcccagaatcacacggtccatcagcttctcatacatactcggtgttgattggaaatcgtgagtggatgcgacgcaatggcttgcatattgcaaatgatgtaaatgatgcaatgacagaccatgaaacgaaaggacagactgccatactagtggctatagatggtgtgttgtgtggaatgattgcaatagcagacactgtcaagcaggaggcagcccttgctgtgcacacgctgaaaaacatgggaatagatgttgtgctgataacgggggacaacagaaaaactgcaaaagccattgctactcaggttgggatcaaaaaagtctttgctgaggttcttccttctcacaaggttgcaaaggtccaggagctccaaaatggcaggaggaaggttgcgatggttggtgatggagtcaatgattcccctgcactagccagggccgatgttggaattgcaattggaacgggcaccgatgttgccattgaagcagcagatgttgttcttatccgaaacgacttgctggatgtagttgccagtattcgtttatcaaagagaacagttcgaagaatccgaataaatctgattcttgccttaatttataatctgcttggaatacccatagcagcagttataagaagccagacacagaaagttatgaagcacaagctcaaggccgcatgaagccacttactccttcccaaatcagtgttcatattggaatggatgataggaggagggattcatccagaccggctccttgggatcagattagccaagtgtctctctcttccttgacttcagacaagctgccaagacgtaatggttttgttgaggaggaaggggacaagtggtcgttgctcatgaatggaggagacgaagaacagtacatctgaag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]