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Previous release (v1)
2025-11-04 05:16:00, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_074617982 1128 bp mRNA linear VRT 25-JUN-2025
DEFINITION PREDICTED: Sebastes fasciatus uncharacterized LOC141757475
(LOC141757475), mRNA.
ACCESSION XM_074617982
VERSION XM_074617982.1
DBLINK BioProject: PRJNA1276069
KEYWORDS RefSeq; includes ab initio.
SOURCE Sebastes fasciatus (Acadian redfish)
ORGANISM Sebastes fasciatus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Eupercaria; Perciformes; Scorpaenoidei;
Sebastidae; Sebastinae; Sebastes.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_133813) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_043250625.1-RS_2025_06
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.4
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 06/12/2025
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 6% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..1128
/organism="Sebastes fasciatus"
/mol_type="mRNA"
/isolate="fSebFas1"
/db_xref="taxon:394691"
/chromosome="19"
/sex="male"
/tissue_type="muscle"
/dev_stage="adult"
/geo_loc_name="Canada: Gulf of St. Lawrence"
/lat_lon="48.183022 N 61.151193 W"
/collection_date="2022-08"
/collected_by="Eric Parent"
gene 1..1128
/gene="LOC141757475"
/note="uncharacterized LOC141757475; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 93%
coverage of the annotated genomic feature by RNAseq
alignments"
/db_xref="GeneID:141757475"
CDS 1..1128
/gene="LOC141757475"
/codon_start=1
/product="uncharacterized protein LOC141757475"
/protein_id="XP_074474083.1"
/db_xref="GeneID:141757475"
/translation="
MEVVLLFQSVIMEVVLVFQSVIMEVVLVFQSVIMEVVLVVFQSVIMEVVLLFQSVIMEVVLLVFQSVIMEVVLVFQSVIMEVVLLVFQSVIMEVVLLFQSVIMEVVLVFQSVIMEVVLVFQSVIMEVVLLVFQSVIMEVVLVFQSVIMEVLLVFQSVIMEVVLLVFQSVIMEVVLLVFQSVIMEVVLLVFQSVIMEVVLVVFQSVIMEVLLVFQSVIMEVVLVFQSVIMEVVLLVFQSVIMEVVLLVFQSVIMEVVLVFQSVIMEVVLLFQSVIMEVVLVFQSDHGGGVGGVSECDHGGGVGVSECDHGGGVGVSECDHGGGVVVSECDHGGGVGGVSECDHGGGVGVSECDHGGGVGGVSECDHGGGVGGVSEL"
ORIGIN
atggaggtggtgttgttgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttggtggtgtttcagagtgtgatcatggaggtggtgttgttgtttcagagtgtgatcatggaggtggtgttgttggtgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttgttggtgtttcagagtgtgatcatggaggtggtgttgttgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttgttggtgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtgttgttggtgtttcagagtgtgatcatggaggtggtgttgttggtgtttcagagtgtgatcatggaggtggtgttgttggtgtttcagagtgtgatcatggaggtggtgttgttggtgtttcagagtgtgatcatggaggtggtgttggtggtgtttcagagtgtgatcatggaggtgttgttggtgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttgttggtgtttcagagtgtgatcatggaggtggtgttgttggtgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttgttgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgatcatggaggtggtgttggtggtgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttgttgtttcagagtgtgatcatggaggtggtgttggtggtgtttcagagtgtgatcatggaggtggtgttggtgtttcagagtgtgatcatggaggtggtgttggtggtgtttcagagtgtgatcatggaggtggtgttggtggtgtttcagaattgtga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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