LOCUS       XM_074566506            6223 bp    mRNA    linear   VRT 21-JUN-2025
DEFINITION  PREDICTED: Larus michahellis ATPase copper transporting beta
            (ATP7B), transcript variant X3, mRNA.
ACCESSION   XM_074566506
VERSION     XM_074566506.1
DBLINK      BioProject: PRJNA1279210
KEYWORDS    RefSeq.
SOURCE      Larus michahellis (yellow-legged gull)
  ORGANISM  Larus michahellis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae;
            Larus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_133896) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_964199755.1-RS_2025_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/20/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6223
                     /organism="Larus michahellis"
                     /mol_type="mRNA"
                     /db_xref="taxon:119627"
                     /chromosome="1"
     gene            1..6223
                     /gene="ATP7B"
                     /note="ATPase copper transporting beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 long SRA reads, 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:141734584"
     CDS             22..4416
                     /gene="ATP7B"
                     /codon_start=1
                     /product="copper-transporting ATPase 2 isoform X3"
                     /protein_id="XP_074422607.1"
                     /db_xref="GeneID:141734584"
                     /translation="

MPGTVFSRRNLRSFIYTALSNTDSPPDCELEPTMKHNFAFDNMGYEESFETVPSASSQEHTVTLNIVGMTCQSCVQSIQGQISKVKGIVNIKVSLEQSNAVIKYLQSEISPVQICQEIQDMGFDTNIAEERLTTATVNSSCSREAVVKLRVEGMTCQSCVTHIEGKIRKLHGVARIKVSLGNQEAIIAYYPYIIQPDDLKSHISNLGYECTIKSKSAPLKLGVLDLERLQNANPKETPASLEGDGVNSLVVEMSSTATVAVQIEGMHCKSCVRNIEGNISDLPGIQSIKVSLEHKRAVVQYSPNLITLSALQQAIESLPPGNFKVCLLSGSEANKGASPSRALLCDLFREPLQDMTCMAVVRIDGMTCNSCVQSIEGTISQRKGVQHIAVSLAGRTGTIHYDPAVTDGEELKAAIEDMGFDASVLTDTTAGGRRHQPDASNAAVQPQAPEPPPQGCALDALPDSPHLDGPNQPSGATAEKCFLQITGMTCASCVSTIERNLQKEDGIVSVLVALMAGKAEIKYKPELVQPLEIAQLIQNLGFEATILEDHTETEGNVELLITGMTCASCVHSIESKLMRANGVFYASVALATCKAHIQFDPEITGPRDIIKIIEEIGFHASVARRVPNAHNLDHKKEIQQWRKSFLCSLLFGIPVLILMIYMLIPNGEHHGSMVLEKNLIPGLSILNLLFFVLCTFVQFLGGWYFYVQAYKSLKHKTANMDVLIVLATTIAYVYSCVILMVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKTSEALAKLISLQATEATVVTLGPDHSIVREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGSSMADESLITGEAMPVTKKPGSTVIAGSINAQGSVLVNATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIVSTVTLIAWITIGFINFDIIQKYFPNQNKHVSKTELILRFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITCGVPKVMRVLLLGDTAVLSLKKVLAVVGTAEASSEHPLGVAVTKYCREELGTQSLGYCTDFQAVPGCGISCQVGGVEAVLGMAEEDLDKLDANRRRNGNAALGDNELIPLSESHGPSASHRYSVLIGNREWMRRNGLHIANDVNDAMTDHETKGQTAILVAIDGVLCGMIAVADTVKQEAALAVHTLKNMGIDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVQELQNGRRKVAMVGDGVNDSPALARADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLILALIYNLLGIPIAAGVFMPVGLVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDTESYEAQAQGRMKPLTPSQISVHIGMDDRRRDSSRPAPWDQISQVSLSSLTSDKLPRRNGFVEEEGDKWSLLMNGEDEEQYI"

ORIGIN      

gctgctgtcttagcttccaaaatgcctgggactgtttttagcagaaggaatcttagatcattcatatacacagctttgtccaacactgattctcctcctgactgtgagctggaacctacaatgaaacacaattttgcttttgacaacatgggctatgaggagagctttgaaaccgtgccctccgcatcttcccaagaacacactgtgacactcaacattgtgggaatgacttgccaatcgtgtgtgcagtcaatacaaggccaaatttccaaggtgaagggcattgtgaatattaaagtctcccttgaacagagcaatgctgtaataaagtatctgcagtcggaaataagtcctgtacagatttgccaggaaattcaggatatgggctttgacaccaacatagcagaagagaggctgacaacagcgactgtaaattcgtcatgctcgagagaagcagtagtgaagcttcgggtagaaggcatgacatgccagtcctgtgtcacccacattgaaggaaagattaggaaactgcatggtgtggcaagaatcaaggtgtcacttggtaaccaggaagcaattattgcttactatccttacatcattcagcctgacgacctcaagagccatatcagtaacctggggtacgaatgcaccattaaaagtaaatcagcccctttgaagctgggtgtccttgatcttgagcgcttgcagaatgcaaaccccaaggagacaccagcaagtctcgagggagatggggtgaattcactggttgttgagatgagtagcacagctacagtggctgtacagatagaaggcatgcactgcaagtcctgtgtcagaaacattgaaggaaatatatcagatcttcctggcatacaaagtattaaagtgtctttggagcataaacgtgctgtggtacagtatagcccaaatttaattaccctgtcagctttgcagcaagctattgaatcccttccacctggaaactttaaagtttgcctccttagtggatcagaagcaaataaaggagcatctccatcacgtgctttgctatgtgatctcttcagagagccgctgcaagacatgacatgcatggctgttgttaggattgatggcatgacctgcaattcttgtgtacagtccatagaagggaccatatcacagagaaaaggagtgcaacatatagcagtttctctagctggcagaactgggacgatacattatgatccagctgttactgatggagaggagttaaaagctgccatagaagacatggggtttgatgcttctgtgctgacagataccactgctggaggacgtagacaccagcctgatgccagcaatgctgctgtgcagccgcaagctccggagcctcctccccagggctgtgccttggatgctcttccagacagtcctcaccttgatgggccaaaccagcccagcggagcgacagctgaaaagtgttttttacaaatcacaggcatgacctgtgcatcgtgtgtgtctaccattgaaagaaatttgcagaaagaagacggaattgtttcagtgttggtagcactgatggcaggtaaagcagagataaaatacaaaccagaactcgtacagcctcttgaaatagcacagctgatccagaatttgggttttgaagctaccatcttagaagatcatacagaaacagaaggaaatgtggagcttcttattacagggatgacttgtgcctcctgtgttcacagtattgaatccaaactcatgagagcaaatggcgtattctacgcctcagttgcacttgctacttgcaaagctcacatccagtttgatcctgaaattaccggacctcgagatattataaaaataattgaggaaattggctttcatgcttccgtggctagaagagttccaaatgcacataacctggatcataaaaaggaaatacagcagtggaggaagtctttcttgtgcagcctactgtttggtatccctgtgttaatcctaatgatttatatgctaatacccaacggtgagcaccatgggtctatggtactggaaaagaatctcattcctggattatctattttaaatcttctcttctttgtcctgtgcacttttgttcagtttcttggtggatggtatttttatgtacaagcttacaaatcactgaagcacaagacagccaatatggatgtgctcatcgtactggccacgacgattgcttacgtgtattcatgtgtgatcctgatggtagcaataattgaaaaggcagagaaaagccctgtcactttcttcgacactcctccgatgctgttcgtgttcattgccctagggagatggctggaacacatagcaaagagtaagacctcagaagctcttgctaaacttatatctcttcaagccacagaagccactgtggtgactcttggacctgaccactctatcgtcagggaggagcaggtagctgttgaactggttcaaaggggtgatattgtaaaggttgttcctggaggaaagttcccagtggatggaaaggtcattgaaggcagttctatggcagatgagtctctcattactggggaagctatgccagtcactaaaaagcctgggagcacagtgattgctggttctataaatgcacagggctcagttcttgttaatgcaactcatgttggtaatgataccactctagcacaaatcgtgaaattggttgaagaagctcaaatgtcaaaggcacccatccagcaactggcagataagtttagtggatattttgttccatttatcatcatcgtttcaacagtgacattgatagcatggattacaattggttttataaattttgatattattcaaaaatattttcctaatcagaacaaacacgtttcaaaaactgaactaatactgaggtttgcgtttcaaacctcaatcactgtgctgagcattgcatgcccctgttctttaggcttggctacccccacggctgtgatggtgggcacaggagttgccgcgcagaatggtattctcatcaaaggtggaaaacccctggaaatggcacacaagatcaagactgtgatgtttgataaaacgggtaccatcacctgtggagttcctaaagtcatgagggtgcttttgctgggagacacggctgtgctctctctgaagaaggtactggcggtggttggcactgcagaagccagcagcgagcatcctttaggagtggcagtcactaaatattgcagagaggagcttggcactcagagcctgggatactgcactgacttccaggcagtcccgggctgtggcatcagctgccaagttggaggtgttgaggctgtcctgggcatggccgaggaggatctcgataagctggacgctaacaggaggaggaacggcaatgctgctctgggagataacgagctgatcccactctccgaatcccatggtccatcagcttctcatagatactcggtgttgatcggaaatcgtgagtggatgcgacgcaatggcttgcatattgcaaatgacgtaaatgatgcaatgacagaccatgaaacaaaaggacaaactgccatactagtggctatagatggcgttttgtgtggaatgatcgcagtagcagacactgtcaagcaggaggcagcccttgctgtgcacacgctgaaaaacatgggaatagatgtggtgctgataacgggagacaacagaaaaactgcgaaagccattgccactcaggttgggatcaaaaaagtctttgctgaggttcttccttctcacaaggttgccaaggtccaggagctccaaaatgggaggaggaaggttgcgatggttggcgatggagtcaatgattcccctgcactagccagggccgacgttggaattgcaattggaacgggtaccgacgttgccattgaagcagcagatgttgttcttatccgaaatgacttgctggatgtagttgccagtattcacttatcaaagagaacagttcgaagaatacgaataaatctgattcttgccttaatttataatctgctcggaatacccatagcagcaggtgtgttcatgcctgttggcctcgtgcttcagccttggatgggatcagctgcaatggcagcttcttctgtgtctgtcgtgctgtcttccctgcagctcaaatgttataagaagccagacacagaaagttatgaagcacaagctcaaggccgcatgaagccacttactccttcccaaatcagtgttcatattggaatggatgataggaggagggattcatccagaccggctccttgggatcagattagccaagtgtctctctcttccttgacttcagacaagctgccgagacgtaatggttttgttgaggaggaaggggacaagtggtcattgctcatgaatggagaagatgaagaacagtacatctgaagcactgtattctcagtacaggaggaaatgttcctcctcaccagtgaagggagggactgacttatgtcatcaagagcttcaaggttgtaagtgaagtcattccttcagctcacaaaacaactgcaactcagatccacgttgggttgtgtggattgtggatttttttcaggtcaccagttatttctagtcgtggaaagaatctgtggctctataatgaactggctcctttgcacacagcaattagtgaaataatgtaaagttataattttcagagtctaaaagagtttctgtcttctagactgtttgcttggcaccaaatttcatacttttcagtctttctaacttaattctttcaagagcacatgaagcaaaagtactttcagggctgccaaatcctaatttcggtgtccaagtgaaaatagccatagcataaggagctctgtggtcagaagctgtatttttacacagaatcctaactagtcacatcactgtgagagcactttgtatttaggattcatgtgtgtctccttggaccaaaaatgctttggtgtttcactgactgtaattctctgaaaggtctgtttcaaagatttttacttgctttcaggtatcgcatccttttgatgcacatttccagtgctaaacttgttctgtcattcccactgctctcctagattttctcttttgctccataagagctctttccttgcacaagatatcctctatgaattattattatgtttacagatattcctgtttgggacaaactcctttaagtcaccaggaacttttccgttcctattgaagtccacaaaggcagagcaattcctggtctaagttagcatataattttcctgtggataccttgcaggaccctgtgaagctccttgacaattgggcagttgtctgtctctgaatttacgccagtgtgagtgaaggtggtatttaccatggtgtgactgagagcagaactaggtggaaaaacatccttaaaatgcggggcttctgtttgctatcacataaataaccttttctgacgacagaaggagtcaaactaagaagaatttgtaatagcttgaatttgtgatgtaaatttgtattcatgttttgaattggttttaatttccctctttgctctagtttcatgagaaatcaaggtgctgaacaaccctttttccactgtaacgtctttaccaaagcttgcagtaactttgtcactgtgaacgttaaattcatcccttaacactttttagtcaaaacagtaggaatcaatggctttgatgcactaaatccagtcccagggtgctgtgttgctccacggtgggactctgaagcaagcggattgaagttttatagtgcaatctaaaaagtgaatgaacaggaattactatgctaagcaatgtgaaataaccacttagttttactgacttaaatacagaaatgtttccaacatgggttcaaatcctgctcctcctaatgtaaaaatgaaaagcaagtcagagaggaaaagaactgtgctgaaagcatggagcaggtcttcctgttctctcttcctcttagtattataattgagctcttagaaacattgacagcgctgtcttaaatgtaaatacaaatcagttttaaaactgtaaaatctttttacatgtgtagagattacggtcacagcacacacacttttcaagcatgctgtaggtttctatacatggccctgtggggaagatgctctgctgtttcactgttttatgttttcttaccagtgcttacagtaaaaatactgtgtttttaaaaaaaaccaaaccatcaa

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