LOCUS       XM_074304797            6148 bp    mRNA    linear   MAM 03-JUN-2025
DEFINITION  PREDICTED: Sminthopsis crassicaudata ATPase copper transporting
            beta (ATP7B), transcript variant X4, mRNA.
ACCESSION   XM_074304797
VERSION     XM_074304797.1
DBLINK      BioProject: PRJNA1266204
KEYWORDS    RefSeq.
SOURCE      Sminthopsis crassicaudata (fat-tailed dunnart)
  ORGANISM  Sminthopsis crassicaudata
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_133619) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_048593235.1-RS_2025_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/29/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6148
                     /organism="Sminthopsis crassicaudata"
                     /mol_type="mRNA"
                     /isolate="SCR6"
                     /db_xref="taxon:9301"
                     /chromosome="3"
                     /sex="female"
                     /tissue_type="fibroblast"
                     /geo_loc_name="Australia: Melbourne"
     gene            1..6148
                     /gene="ATP7B"
                     /note="ATPase copper transporting beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 26 long SRA reads, 4 Proteins, and 94% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:141563543"
     CDS             336..4703
                     /gene="ATP7B"
                     /codon_start=1
                     /product="copper-transporting ATPase 2 isoform X2"
                     /protein_id="XP_074160898.1"
                     /db_xref="GeneID:141563543"
                     /translation="

MLSKVSSAPCVEELPIKQEFAFDNIGFEGSLDTLPAALSSTSTGTINILGMTCQSCVKSIEDKISKLKGIVSIKVSLEQSNATVKYVPLTINLPQICSEIGDMGFDAYIAEGKAASWPPKPSSADEAVTKLRVEGMTCQSCVNTIEGKVGKLQGVLKIKVSLSNQEAVITYQPYIIQPGDLRDHINDMGFEATIKSKMAPLSLGMIDVGRLQDNNPKKMSTQLSCNNIEVCGDQFSPATSLQLGVEGMHCKSCVLNIERNIAGLSGVQNIKVSLENKSADVRFYPAYVTPLSLKQAIEALPPGNFKVTLPNETEGSELENSLDKWPSKLPLSTRSQGNQTEGIRTTVVIGIEGMTCASCVQSVESLLSQREGVGKVSVSLAERIGTIHYNTSLVSPEELKAAIEDMGFEASIVTETSSRKHVGNCYAVDSNAQTELKDSVSLLEEEIDVKGCHKTNILGHSPKPFPSEYPLHPKAVTSEKCFLCITGMTCASCVSNIERNLLKEDGVLSVLVALMAGKAEVKYNPQIIQPLEIAQLVQNLGFEATIMEDYTGSDGNIELIVTGMTCASCVHNIESKLTRTNGILYASVALATSKAHIKFDPEIVGPRDIIKIIEGIGFHASLAQRNPNAHHLDHKMEIKQWKKSFLSSLVFGIPVLCLMIYMLIPSSQPHESMILEHNLIPGLSILNLIFFVLCTFVQFLGGWYFYVQAYKSLKHRTANMDVLIVLATSIAYAYSLVILVVAIAEQAEKSPVTFFDTPPMLFVFIALGRWLEHVAKSKTSEALAKLMSLQATEATVVTLGNDNLIIREEQVPMELVQRNDVIKVVPGGKFPVDGKVLEGSTMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVIATHVGSDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIISTVTLVVWIVIGFIDFGVVQKYFPSANKHISQAEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMSHRIKTVMFDKTGTITYGVPKVMRVLLLVDMVSLPLKKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCMDFQAVPGCGIGCKVSNVEAILGQSKDPLNEQRSHLNGVGSLPTEKGAAASQTYSVLIGNREWMRRNGLTISTDVSDAMTNHEMKGQTAILVAIDGVLCGMVAIADSVKQEAALAVHTLKSMGVDVVLITGDNRKTAKAIATQVGINKVFAEVLPSHKVAKVQELQNQGKKVAMVGDGVNDSPALARADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLVLALIYNLIGIPIAAGVFMPIGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDMEKYEAQAHGHMKPLTPSQVSVHIGMDDRRRDKVSPWDQVSYISQVSLSSLTSDRGSRHSILGEDRGDKWSLLPEDHDEEQSI"

     polyA_site      6148
                     /gene="ATP7B"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ggaatgagaatccgggcctgactgtgccgcctgctgcctcagaagctgctcccctctctgggtctcaggttcttcctccatgagcggggggaggggggttaaatggtcacaaaagacttcgcagcgactgaattatcatagtgaagtcccggacagggacacaagaaactcaggataagctcagagcaagaggaagcgaagctgctgctcagataagttcccggccccgtcacggtatcagacagccctccgcggccccgaggagcagagctccccagagccgggacccccaccaagttagcccgggatcctcacctcataaatttgagcatataatgttgtccaaagtttcttctgctccttgtgttgaagaattaccaataaaacaggaatttgcttttgacaacataggctttgaaggcagcttggatactttacctgcagcattatcttcaacaagcactggtactatcaacattttgggcatgacatgccagtcatgtgtgaagtctatcgaggataagatttctaagttgaaaggtattgtaagcataaaagtttcccttgaacagagcaatgccactgtgaaatatgtaccactgaccataaatctaccacaaatttgctctgaaattggggatatgggatttgatgcatacatagctgaaggaaaggctgcatcatggccccctaaaccctcatctgctgatgaagcagtgaccaagcttcgtgtggagggcatgacttgtcagtcatgtgtcaatactatagaagggaaggttggaaaacttcaaggagttctgaaaatcaaagtctcccttagcaatcaggaggctgtcattacttatcagccttacatcattcaacctggagatctcagggaccatataaatgacatgggatttgaagccaccatcaagagcaaaatggcacccttaagcttgggaatgattgatgttggaaggttacaggacaataacccaaaaaaaatgtcaactcaactctcctgtaataacattgaagtatgtggggaccagtttagcccagctactagtctacagctaggagtagaaggaatgcactgcaaatcctgtgtcttgaatattgaaagaaatatagctggactctcaggtgtgcagaatattaaagtgtctctggaaaacaaaagtgcagatgttcggttttacccagcctatgtcaccccactatccttgaagcaagccattgaggctcttccacctgggaatttcaaagtcactcttcctaatgaaacagaaggcagtgagttggagaattcattagacaagtggccttcaaaacttcctctttctacacgatcccaaggaaaccaaacagagggaattcggactactgttgtgattggcattgagggcatgacctgtgcttcctgtgtgcagtctgttgagagcttactatcccaaagggaaggggtagggaaagtttcagtctctttagctgaacggattggaactatccattataatacctcactagtgagccctgaagagctaaaagctgctattgaagacatgggatttgaggcatccattgtaactgaaaccagttccagaaagcatgttggaaattgttatgctgtggattctaatgcccaaacagagcttaaggactcagtttctcttctagaggaagaaattgatgttaaggggtgtcacaaaacaaacatcttgggccactctccaaagccttttccctcagaatacccacttcaccctaaggcagtgacctcagaaaaatgctttttatgtataacaggcatgacgtgtgcatcctgtgtttccaacatagaaagaaatctactaaaagaagatggtgtactttcggttctggtcgctttaatggctggaaaagcagaggtcaagtataatccacaaatcatccagcctcttgaaatagcccagcttgtccagaacttgggctttgaagcaacaataatggaagattacactggctcagatggcaacatagagctgattgtcacaggaatgacctgtgcttcatgtgttcacaatattgaatccaagttaactagaaccaatggcattctctatgcctctgtggcccttgctactagcaaggctcacatcaagtttgatcctgaaatcgtgggtcctcgggatattataaaaattattgagggaatcggctttcatgcttccttggctcagagaaatcccaatgctcatcatttggatcacaagatggaaatcaaacaatggaagaagtctttcttgtccagtctggtgtttggcatccctgtcttgtgcttgatgatttacatgttgatacctagcagccagcctcacgagtccatgatattggagcacaacctcatccctggattatccattttaaatctcatcttctttgtgctgtgcacttttgtccagttcctaggtgggtggtatttctatgtccaggcctacaaatcattgaaacacaggactgccaacatggatgtgctcattgtgctggcaacaagcattgcttatgcctactctcttgtgatcttggtggtagccattgctgaacaggcggagaagagtcctgtcaccttctttgatacacctcccatgctttttgtattcattgcactggggaggtggttggaacatgtggcaaagagcaaaacatctgaagcccttgcgaaactaatgtctcttcaagccacagaagctactgttgtgacgttaggcaatgacaacctaatcatcagggaggaacaagtgcctatggagctggtccagcggaatgatgtgatcaaggtagtccccgggggaaagttcccagtggatggaaaagtcctagaaggcagcaccatggcagatgagtccctcatcacaggagaagcgatgccggtcactaagaaaccagggagcacagtgattgctggttcaatcaatgcgcatggctcggtgctagttattgctactcatgttgggtctgacaccacattagcacaaattgtgaaactggtagaggaagctcaaatgtcaaaggcacccattcagcaactggctgacaaatttagtggatattttgtcccattcatcatcatcatttcaactgtgacattggtggtatggattgtaatcggttttatcgattttggtgttgttcaaaaatactttcctagtgctaacaaacatatctcccaggcagaagtgatcattcggtttgcattccagacatctatcacggtattgtgtattgcctgtccttgctctctgggcttggctacaccaacagcagtaatggttggaacaggcgtggctgcccaaaatgggattctcatcaaaggaggaaagcctcttgaaatgtcacacaggatcaagacagtgatgtttgacaaaactggaaccatcacctatggtgtccccaaagtcatgagagttcttctgctggtcgatatggtttccttacccttgaagaaagttctggctgtggttgggactgctgaagccagcagtgagcatcccctgggtgtggctgtcactaagtactgtaaagaggaacttggaactgaaaccctaggatactgcatggacttccaagctgtccctgggtgtggaattggctgtaaagtcagcaatgtggaagccatcctgggccagagcaaagaccctttaaatgaacagagaagtcatctgaatggtgttggcagccttcccactgaaaaaggtgcagcagcatcccagacctactctgtgctaattgggaaccgggaatggatgcgacgaaatggtttgactatatcaactgatgtcagtgatgccatgacaaaccatgaaatgaaggggcagactgccatattggtggctattgatggtgtgctctgtgggatggtggccatagcagattctgtcaagcaggaggcagcattggctgtccatacccttaaaagtatgggtgtggatgtcgttctgataactggggacaacaggaaaactgcaaaagccatcgccacacaggtgggcattaacaaagtgtttgcagaggtcctcccctctcacaaggttgccaaggtccaggagcttcaaaatcaagggaagaaagtggccatggtaggagatggagtgaatgactctccagccttggcgagggccgatgtcggcattgccatcggcacggggacagacgtggctatcgaagctgccgatgtcgtcctgattaggaacgatttgctagatgtggttgctagcattcatctttccaagaggactgtccggagaatacggataaacctggtcttggccttgatttataacctaattgggatacccatcgcagcaggtgtgttcatgcccattggcattgtgctgcaaccctggatgggatccgccgccatggccgcctcctccgtgtctgtggtactctcctcgctacagctgaagtgctacaagaaaccagatatggaaaagtatgaagcccaagcccatggccacatgaagccccttactccctcccaagtgagtgttcacattgggatggatgaccggcgaagggacaaggtctccccatgggaccaggtcagctacatcagccaggtgtcactgtcctccctgacatcggatcggggctctcggcacagcatcctgggagaggatagaggggacaaatggtccctgctcccagaagatcacgacgaagaacagtccatctgaaagtcagcaatcatcgcagagcatcagcagcatgatcagggtgccgtatttctcaggagatcaatgagttcccacacacatgaaaggagggggagaggaattcttttgcttcagctcagctaaacaactatagcatcatttctcctttgttgggatgaactgaaatcgtctctggcattgggagcagttctgatacacttattcttggcaaacaattttaggcctaggaaaagagttctggcccctggcaactgtcttcaacactggtttgaaatatacaaagagaaaaccttcagcctccaccatttcatcaagtctttgtttttggagaaggaaaaacaatcccctacaaatgggaggaaagccagtgttcctggggtttcccttttatcatttggtatgaatagtagtagtaaaatatgggaactcacactaggactaaaaagctggccaagcttttttgtagagtctatgtaaaaacttcacatatcatattttttattaatgcaaatctttacgtttatcatattgttgagagcacagtttacctcaaaatgtcattttctaacagcatgtgacctgttttccagttctcatctctcctgcctttgtggtcatgagcctttggtcctttgttccctacctctggaatccctgtatctgctactgtctattctgtctcctttctgatgtttctccttttgacttgactagtgtacttcctggctgaggggtgcattcatacttatgtgccagatggctttgggtgatgaggaatgcttttgtcacctaaggcccctcaatcattgcttctcactgcagaggagggggtgcactgttctgtagcagcagctgctgctgggaacctgagattttagagcaaataataattttcttttcctagaggttgtagggtcctggtaaaagggcatagtggtgccattgtactaagcccaagaccctattacggtgcttgtgattggcaagcagtgaggagggaagaagaaatgagcattttctgttgaaaacagttactcaaagtcactgtttaggaaaccttaataaatcattgcctcctcagctacttcatggtcttcagtagacctacatcagtcctgccaaaaatgggaggaaagtattctgggggagtggaagagggacaactggaccctcaaataaaacatgcatattttttatattcaacagctatttgcaaatggcatccatatcaagaaggcagatggatcttgttttatttgtctgagttaatttcctacagctgataattgaaaggaccatatggaagtgggctggtggaaagactccactggtggaagtagttatgtggatcctttggagggtggaattggaagatttgaaagaacaaagggtccatgactaatagatattatgctatttcaagccatgatcaatatttgccgccc

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