2025-09-14 17:52:49, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS XM_074158680 4449 bp mRNA linear VRT 27-MAY-2025 DEFINITION PREDICTED: Numenius arquata ATPase copper transporting beta (ATP7B), transcript variant X3, mRNA. ACCESSION XM_074158680 VERSION XM_074158680.1 DBLINK BioProject: PRJNA1265768 KEYWORDS RefSeq. SOURCE Numenius arquata (Eurasian curlew) ORGANISM Numenius arquata Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Numenius. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133576) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_964106895.1-RS_2025_05 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 05/22/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4449 /organism="Numenius arquata" /mol_type="mRNA" /db_xref="taxon:31919" /chromosome="1" gene 1..4449 /gene="ATP7B" /note="ATPase copper transporting beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins" /db_xref="GeneID:141471923" CDS 49..4449 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X3" /protein_id="XP_074014781.1" /db_xref="GeneID:141471923" /translation="
MPGTVFSRRNLRSFMYTALSDTDSLPDCKLDPTMKHNFAFDNMGYEESFETVPSPSSQEHTVTVSIVGMTCQSCVQSIEGRISKVKGIVNIKVSLEQDNAVIKYQQSEISPEQICQEIQDMGFDTNIAEERLTTATTNLSCLREAVVKLRVEGMTCQSCVTNIEGKVRKLHGVARIKVSLGNREAIIAYYPYIIQPDDLKNHISNLGYECTIKSKSAPLKLGVLDLERLQNANPKETPASLESDGVDSLVVEMSGTATVAVRIEGMHCKSCVRNIEGNISDLPGIQSIKVSLEHKRAVVQYSPNLITLSALQQAIESLPPGNFKVGLLNGSEANKGASPSPALRCDLSREPLQDTTCTAVIRIDGMTCNSCVQSIEGTISQRQGVQRIAVSLAGRTGTIHYDPAVTNGEELRAAIEDMGFDASVLTDTAAGGRRHQPDAINAVVQPRAPERPSQGCASDAFPDRPHLDGPNQPSGATAEKCFLQITGMTCASCVSTIERNLQKEHGIISVLVALMAGKAEIKYKPEFIQPLEIAQLIQNLGFEATVIEDHAGTEGNVELLITGMTCASCVHSIESKLMRTNGIFYASVALATCKAHIQFDPEITGPRDIIKIIEEIGFHASVARRVPNTHNLDHKKEIQQWRKSFLCSLLFGIPVLILMIYMLIPDGEHHGSMVLEQNLIPGLSILNLLFFILCTFVQFLGGWYFYVQAYKSLKHRTANMDVLIVLATTIAYVYSCVILMVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKTSEALAKLISLQATEATVVTLGPDHSIVREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGSSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVTATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIISTVTLIAWITIGFINFDIIQKYFPNQNKHVSKTELILRFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITCGVPKVMRVLLLGETAVLSLKKVLAVVGTAEASSEHPLGVAVTKYCREELSTQSLGFCTDFQAVPGCGISCKVGGVEAVLATAEKGLDKLDANRSTDSNASLGDNELIALPESQKGPSASHTYSVVIGNREWMRRNGLHIANDVNDAMTDHEMKGQTAILVAIDGVLCGMIAIADTVKQEAALAVHTLKNMGIDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVQELQSGRRKVAMVGDGVNDSPALARADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLILALIYNLLGIPIAAGVFMPVGLVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDTESYEAQAQGRMKPLTPSQISVHIGMDDRRRDSSRPAPWDQISQVSLSSLTSDKLPRRNGFVEEEGDKWSLLMNGEDDEEQYI"
ORIGIN
tgtgtagccctgagtcagtcatccagggctgctgtcttagctactgaaatgcctgggactgtttttagcagaaggaatcttagatcattcatgtacacagctttgtccgacactgattctcttcctgactgtaagctggatcctacaatgaaacataattttgcttttgacaacatgggctatgaggagagctttgaaaccgtgccctctccatcttcccaagagcacactgtgacagtcagcattgtgggaatgacttgccagtcgtgtgtgcagtcgatagaaggccgaatttccaaggtgaagggcattgtgaatattaaagtctcccttgaacaggacaacgctgtaataaagtatcagcagtcggaaataagtcctgaacagatttgccaggaaattcaggatatgggctttgacaccaacatagcagaagagaggttgacaacagcgaccacgaatttgtcatgcttgagagaagcagtagttaaacttcgggtagaaggcatgacatgccagtcctgtgtcaccaacattgaaggaaaggttaggaaactgcacggtgtggcgagaatcaaggtgtcacttggtaaccgggaagcaattattgcttattatccttacatcattcagcctgacgacctcaagaatcatatcagtaacctagggtatgaatgcaccattaaaagtaaatcagcccctttgaagctgggtgtcctcgatctcgagcggttgcagaatgcaaaccccaaggagacaccggcaagtcttgagagtgatggggtggattcgctggtcgttgagatgagtggcacagctacggtggctgtacggatagaaggcatgcactgcaagtcctgtgtcagaaacattgaaggaaatatatcagatcttcccggcatacaaagtattaaagtgtctttggagcataaacgtgctgtggtacagtatagtccaaatttaattaccctgtcagctttgcaacaagctatagaatcccttccacctggaaactttaaagtaggcctcctgaatggatcagaagcaaataaaggagcatctccatcacctgctttgcgctgtgatctctccagagagccgctgcaggacacgacatgcacagctgtcattaggattgatggcatgacctgcaattcttgcgtacagtccatagaagggaccatatcacagagacaaggagtgcaacgtatagcagtttctctagctggcagaactgggaccatacattatgatccagctgttactaatggagaagagctaagagctgccatagaagacatggggtttgatgcttctgtgctgacagatactgctgctggaggacgtaggcaccaacctgacgccatcaatgctgtcgtgcagcctcgagctccagaacgtccttcccaaggctgtgcctcggatgcttttccagacagacctcaccttgatggaccaaaccagcccagtggagcaacagctgaaaagtgttttttacaaatcacaggcatgacctgtgcgtcgtgcgtgtctaccattgaaagaaatttgcagaaagaacacggaattatttcagtgttggtagcactgatggcaggtaaagcggagataaaatacaaaccagaattcatacagccccttgaaatagcacagctgatccagaatttgggttttgaagctactgtcatagaagatcatgcaggaacagaaggaaacgtggagcttcttattacagggatgacttgtgcttcctgtgttcacagtattgaatccaagctcatgagaacaaatggcatattctacgcctcagttgcacttgctacttgcaaagctcacatccagtttgatcctgaaattactggacctcgagatattataaaaataattgaggaaattggctttcatgcttctgtggctagaagagttccaaatacacataacctggatcataaaaaggaaatacagcagtggaggaaatctttcttgtgcagcctgctgtttggtatccctgtcttaatcctaatgatttatatgctaatacctgacggtgagcaccacgggtctatggtgctggaacagaatctcatccctggattatctattttaaatctactcttctttatcctgtgcacttttgttcagtttcttggtggatggtatttttatgtacaagcttacaaatcactgaagcacaggacggccaatatggatgtgctcatcgtactggccacgacgattgcttacgtgtattcctgtgtgatcctgatggtagcgataattgaaaaggcagagaaaagccctgtcactttcttcgacactcctccgatgctgttcgtgttcattgccctggggagatggctggaacacatagcaaagagtaagacctcagaagctcttgctaaacttatatctcttcaagccactgaagccactgtggtgactcttggaccggaccactctatcgtcagggaggagcaggtagctgttgaactggttcaaaggggtgatattgtaaaggttgttcctggtggaaagttcccggtggatggaaaggtcattgaaggcagttctatggcggatgagtctctcattactggggaagctatgccagtcactaaaaagcctgggagcacagtgattgctggttctataaatgcacatggctcagttcttgttactgcaactcatgttggtaatgataccactctggcacaaatcgtgaagttggtggaagaagctcaaatgtcgaaggcacccatccagcaactggcagataagtttagcggatattttgttccatttatcatcatcatttcaacagtgacattgatagcatggatcacaattggttttataaattttgatattattcaaaaatattttcctaatcagaacaaacacgtttcaaaaactgaactaatactgaggtttgcgtttcaaacctcaatcaccgtgctgagcattgcatgcccctgttctttaggcttggccacccccacagctgtgatggtgggcacaggagttgctgcacagaatgggattctcatcaaaggcggaaaacccctggaaatggcacacaagatcaagactgtgatgtttgataaaactgggaccatcacctgtggcgttcctaaagtcatgagggtgcttttgctgggcgagacagctgtgctctctctgaagaaggttctggcggtggtcggcactgcagaagccagcagcgagcatcccttaggagtggcagtcactaaatattgcagagaggagctcagcactcagagcctgggtttctgcaccgatttccaggcagtcccaggctgtggcatcagctgcaaagtcggaggtgttgaggccgtcctggccacggccgagaagggtcttgataagctggacgccaacaggagcacggacagcaatgcttctctgggagataacgagctgatcgcactccccgaatcacagaaaggtccatcagcttctcatacctactcagtggtgattggaaatcgtgagtggatgcgacgcaacggcttgcatattgcaaatgacgtaaatgatgcaatgacagaccatgaaatgaaaggacagactgccatactagtggctatagatggtgtgctgtgtggaatgatcgcaatagcagacactgtcaagcaggaggcagcccttgctgtgcacacgctgaaaaacatgggaatagatgtggtgctgataacgggggacaacagaaaaactgcaaaagccattgctactcaggttgggatcaaaaaagtctttgctgaggttcttccttctcacaaggttgcaaaggtccaggagctccaaagtggaaggaggaaggttgcgatggttggtgatggagtcaatgattcccctgcgctagccagggccgacgttggaattgcaattggaacgggcaccgatgttgccattgaagcagcggatgttgttcttatccgaaatgacttgctggatgtagttgccagtattcacttatcaaagagaacagttcggagaatacgaataaatctgattcttgccttaatttataatctgctcggaatacccatagcagcaggtgtgttcatgcctgtcggcctcgtgcttcagccttggatgggatcggctgcaatggcagcttcttctgtgtctgtcgtgctgtcttccctgcagctgaaatgttataagaagccagacacagaaagttatgaagcacaagctcaaggccgcatgaagccacttactccttcccaaatcagtgttcatattggaatggatgataggaggagggattcatccagaccggctccttgggatcagattagccaagtgtctctctcttccttgacttcagacaagctgccgagacgtaatggttttgttgaggaggaaggggacaagtggtcattgctcatgaatggagaagatgatgaagaacagtacatctga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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