2025-09-14 17:53:31, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS XM_074022092 2564 bp mRNA linear PRI 16-MAY-2025 DEFINITION PREDICTED: Macaca fascicularis ATPase copper transporting beta (ATP7B), transcript variant X30, mRNA. ACCESSION XM_074022092 VERSION XM_074022092.1 DBLINK BioProject: PRJNA1105996 KEYWORDS RefSeq. SOURCE Macaca fascicularis (crab-eating macaque) ORGANISM Macaca fascicularis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_088391) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_037993035.2-RS_2025_03 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 03/31/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2564 /organism="Macaca fascicularis" /mol_type="mRNA" /isolate="582-1" /db_xref="taxon:9541" /chromosome="17" /sex="female" /tissue_type="parthenogenetic embryonic stem cells" gene 1..2564 /gene="ATP7B" /note="ATPase copper transporting beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 136 long SRA reads, 1 Protein" /db_xref="GeneID:101866907" misc_feature 1 /gene="ATP7B" /experiment="COORDINATES: cap analysis [ECO:0007248]" /note="transcription start site" CDS 172..2427 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X17" /protein_id="XP_073878193.1" /db_xref="GeneID:101866907" /translation="
MDSAMEKARGDVPQSPEQSFLATLSDPHVTLLSVHKQWSFRKSPGVRHSARPVSTMEEGTSLSEEGEFPQRVLNGTWEMSSNQILSKLSLPTRAWEPAMKKSFAFDNVGYEGGLDGLGPSSQVDTSTIRILGMTCQSCVKSIENRISSLKGIVSMKVSLEQGSATVKYVPSVVSLQQVCHQIGDMGFEASIAEGKAASWPSRSLPAQEAVVKLRVEGMTCQSCVGSIEGKVRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLRDHVNDMGFEAAIKNKVAPLSLGPIDIERLESTNPKRPLSSANQNFNNSETLGHQGRNVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVQYDPSRTSPVALQTAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSSPRNQVQSTCSTTLIAIAGMTCASCVHTIEGMISQLEGVQQISVSLAEGIGTVLYNPSVISPEELRAAIEDMGFEASVVSENCSTSPLGNHSAGNSMVQTTGGTPTSVQEVALHAGSLPTNHLPDIWAKSPQSTRAVAPQKCFLQIKGMTCASCVSNIERNLQKEAGPVSPWRSCPPRVLQVMCHPGGPAHPECYSRDLMVPGVLSVLVALMAGKAEVKYDPEVIQPLEIAQLIQDLGFEAAVMEDSAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLAQRIPNAHHLDHKMEIKQ"
ORIGIN
aaagcttgctgccagactgaagactgccggcagcctctcctgggctgggtcgggagtagaagggtgtcttccccttgctaattaggagggcacttctaaagcgtttctctctaacacaacaaaatggtctgctgaaggtgaactgctttagtgaggagggaaggcgtgaccatggactcagcgatggagaaagccaggggtgatgtgccccagagccccgagcagtccttcctggcaactctgagtgacccacatgtgaccctgctgtctgtccacaagcagtggtcctttaggaagagccctggggttaggcactcagccaggccagtgtctaccatggaggaaggcacttcactgtcagaggaaggagaatttccacagagagttttgaatggaacctgggaaatgagttccaatcagatcttatctaagctttctttgcctacccgtgcctgggaaccagcaatgaagaagagttttgcttttgacaatgttggctacgaaggtggtctggatggcctgggcccttcttctcaggtggacaccagcacaatcaggatcttgggcatgacttgccagtcatgtgtgaagtccattgagaacagaatttccagtttgaaaggcatcgtgagcatgaaggtttccctggaacaaggcagtgccactgtgaaatatgtgccatcagttgtgagcctgcaacaggtttgccatcaaattggggacatgggcttcgaggccagcattgcagaaggaaaggcagcctcctggccctcaaggtccttgcctgcccaggaggctgtggtcaagctccgggtggagggcatgacctgccagtcctgtgtcggctccattgaaggcaaggtccggaaactgcaaggagtagtgagagtcaaagtctcactcagcaaccaagaggctgtcatcacttatcagccttatctcattcagcctgaagacctcagggaccatgtaaatgacatgggatttgaagctgccatcaagaacaaagtggctcccttaagcctgggaccaattgatattgagcggttagaaagcactaacccaaagagacctttatcttctgctaaccagaattttaataattctgagaccttgggacaccaaggaaggaatgtggtcaccctccaactgagaatagatggaatgcactgtaagtcttgtgtcttgaatattgaagaaaatattggccaactcctaggggttcaaagtattcaagtgtccttagagaacaaaactgcccaagtacagtatgacccttctcgtaccagcccagtggctctgcagacggctatcgaggcacttccacctgggaactttaaagtttctcttcctgatggagccgaagggagtgggacagatcacaggtcttccagttctcattcccctggctcctccccaagaaaccaggtgcagagcacatgcagtaccactctgattgccattgccggcatgacctgtgcatcctgtgtccataccattgaaggcatgatctcccaactggaaggggtgcagcaaatatcggtgtctttggccgaagggattggaacagttctttataatccctctgtaattagcccagaagaactcagagctgctatagaagacatgggatttgaggcttcagtcgtttctgaaaactgttctactagccctcttggaaaccacagtgctgggaattccatggtgcaaactacaggtggtacacctacatctgtgcaggaagtggctctccacgctgggagtctccctacaaaccatctcccggacatctgggcaaagtccccacaatcaaccagagcagtggcaccgcagaagtgcttcttacagatcaaaggcatgacctgtgcgtcctgtgtgtccaacatagaaaggaatctgcagaaggaagctggtcctgtgtcaccctggaggtcctgcccacccagagtgttacaggttatgtgtcaccctggaggtcctgcccacccagagtgttacagccgtgacctgatggttccaggtgttctctccgtgttggttgccttgatggcaggaaaggcagaggtcaaatatgacccggaggtcattcagccgctcgagatagctcagttgatccaggacctgggctttgaggcagcagtcatggaggactccgcaggctccgatggcaacattgagctgacaatcacagggatgacctgcgcgtcctgtgtccacaacatagagtccaaactcacgaggacgaatggcatcacttatgcctccgttgcccttgccaccagcaaagcccttgttaagtttgacccggaaattatcggtccacgggatattatcaaaattattgaggaaattggctttcatgcatccctggcccagagaatccccaacgctcatcacttggaccacaagatggaaataaagcagtaggtggaagaagtctttcctgtgcagcctggtgtttggcatccctgtcatggctttaatgatctatatgctgatacccagcaaccagccccaccagtctatggtcctggaccgcaacatcattccaggactgtccattc
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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