2025-09-14 17:52:48, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS XM_073894610 4696 bp mRNA linear MAM 09-MAY-2025 DEFINITION PREDICTED: Callorhinus ursinus ATPase copper transporting beta (ATP7B), transcript variant X4, mRNA. ACCESSION XM_073894610 VERSION XM_073894610.1 DBLINK BioProject: PRJNA481736 KEYWORDS RefSeq. SOURCE Callorhinus ursinus (northern fur seal) ORGANISM Callorhinus ursinus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_027397069) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_003265705.2-RS_2025_05 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 05/07/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4696 /organism="Callorhinus ursinus" /mol_type="mRNA" /isolate="GAN/ISIS: 27379988/994484" /db_xref="taxon:34884" /chromosome="Unknown" /sex="female" /tissue_type="blood" /dev_stage="adult" gene 1..4696 /gene="ATP7B" /note="ATPase copper transporting beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:112826796" CDS 297..4565 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X4" /protein_id="XP_073750711.1" /db_xref="GeneID:112826796" /translation="
MVVKGMTVDTAMEEAGGETSGSPEPSFLATLGDPQVTLVSVHKRRSFMRNAGARGSTRPVTSEEEGEFSQKVLNGTRGIRSNQILSKLSLPTRAGEPAMKQSFAFDNVGYEGGLDGVCPPQMTSSTISISGMTCQSCVKSIEGRISSLKGVVSIKVSLEQGSATVKYVPSILSLPQICRHIEDMGFEASIAEGKAASWPSRSSPGLEAVVKLQVEGMTCQSCVSSIEGRLGKLQGVVRVRVSLGTQEAVITYQPYLIQPQDLRDHVNDMGFEAVIKNRVAPVSLGPIDIGRLQRTDPKTPSASDNQNLNNSEPSGHHGSHVATLQLRVDGMHCKSCVLNIEENIGQLPGVQNIQVSLENRIAQVQYDPSRVTAGALQRAIEALPPGNFKVSPPDGAAGSGTGSRSSNCGAPGPASRTQAPGVCNTVVLVIAGMTCASCVQSIEGLISQREGVRQISVSLADGTGVVLYDPSVINPEELRAAVEDMGFETSVLFENCYSNHVGNHSAGNSSAHPTAGVPVSAQEGAPHAGGLPKSHNPSSSSQSLQASTTAAPQKCFLQIRGMTCASCVSNIERNLQKEAGILSVLVALMAGKAEVKYNPEVIQPLEIAQLIQDLGFEAAVMEDYTDSDGDLELIITGMTCASCVHNIESKLTRTNGITYASVALATSKAHVKFDPEVIGARDIVRIIEEIGFHASPAQRNPNAHHLDHKVEIKQWKKSFLCSLVFGIPVMGLMIYMLVPSNKPHESMVLDHNIIPGLSILNLIFFILCTFVQLLGGWYFYVQAYRSLRHRAANMDVLIVLATSIAYTYSLVILVVAMAEKAERSPVTFFDTPPMLFVFIALGRWLEHVAKSKTSEALAKLLSLQATEATVVTLGEDNLIIREEQVPMELVQRGDIIKVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIISTLTLVVWIIIGFIDFGVVQKYFPTPNKHISQTEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPKVMRVLLLVDVATMPLRKVLAVVGTAEASSEHPLGMAVTKYCKEELGTKTLGYCTDFQAVPGCGIGCKVSSVEGILAHSEHQQSKQAAPLSRTGGVPEAIDATPQTFSVLIGNREWMRRNGLTISSDISDAMKDHEMKGQTAILVAIDGVLCAMIAIADAVKQEAALAVHTLKSMGVDVVLITGDNRKTARAIATQVGINKVFAEVLPSHKVAKVQELQNEGKKVAMVGDGVNDSPALAQADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVWRIRLNLVLALIYNLIGIPIAAAIRSPTWRGMRRRPRAA"
ORIGIN
ggcacgtgtgagaccatgtgcaaagactcccagtgccagatgcggtgtgatgagtgagagtgtgccagttggctggaaggatgtaagtaaacaagaacaaatatctacccagcggtgtgcagcctccccgagttccgaagctgactgcagcctctcagcggactgtctccggagcagaggggagtccgcaggacagagcacagaaggtgcctccccctgctagttaggaggacacttttaaagcatttccttctcacatgaccacgtagtgtggtgcgggtgaactgcttgctcaaatggtggttaaaggtatgaccgtggacacagcgatggaggaagctgggggtgagacatccgggagccctgagccgtccttcctggcgaccctgggtgacccacaggtgacccttgtgtccgtccacaagcggaggtccttcatgaggaatgctggggccaggggctccaccaggccggtgacttcggaggaggaaggagagttttcccagaaggttttgaatggaacacggggaatccgttccaatcagatcctgtctaaactttctctgcccactcgtgccggggagccagcaatgaagcagagtttcgcctttgacaatgttggctatgaaggcggcctggatggcgtgtgcccccctcagatgaccagcagcaccatcagcatttcgggcatgacttgccagtcgtgtgtgaagtctatcgagggcaggatttccagcttgaaaggcgtcgtgagcattaaggtttccctggaacaaggcagcgcgaccgtcaagtacgtgccgtccatcctgagcctgccacagatttgccggcacattgaggacatgggctttgaggccagcatcgcagaaggaaaggccgcctcctggccttcaaggtcctcgcctggcctggaggccgtggtcaagctccaggtggagggcatgacctgccagtcctgcgtcagctccatcgaaggcaggcttgggaaactgcaaggggtagtgagggtccgagtgtccctcggcacccaggaagcagtcattacctaccagccttatcttatccagccccaggacctcagggaccatgtcaatgacatgggctttgaagctgtcatcaagaacagagtggcgcccgtaagcctgggaccaattgatattgggcggttacagaggacggacccaaagacaccttcggcttctgataaccagaatctcaataactctgagccctcggggcaccatgggagccatgtggccaccctgcaactgagagtggatggaatgcactgtaagtcttgtgtcctgaatattgaagaaaacataggccaactccccggggttcaaaatattcaagtgtccttggagaacagaatcgcccaagtacagtacgacccttctcgtgtcactgcaggcgccctgcagagggccattgaagctcttccacctgggaacttcaaggtctctcctcctgatggagcagcagggagtgggacaggtagcaggtcttccaactgtggggcccccggccccgcctcgagaacccaggcgccgggcgtgtgcaatactgtggtgctcgtcattgctggcatgacctgcgcatcctgtgtccagtccatcgaaggcctgatctcccaaagggaaggggtgcggcaaatatcagtctctctggctgacgggaccggagtggtgctctatgatccctctgtaattaacccagaagaactccgagctgctgttgaagacatgggatttgagacttcagttctttttgaaaactgttatagcaaccatgttggaaatcatagcgcggggaattcctcagcgcaccccacagctggcgtacctgtgtctgcgcaggaaggggctccccatgctggggggctccctaaaagccacaaccccagctcctcgtcacagtccctgcaagcctctaccacagcggcaccccagaagtgctttttacagatcaggggcatgacctgtgcatcctgtgtgtccaatatagagagaaacctgcagaaagaagcaggtattctctcggtgctggttgccctgatggccggaaaggcagaggttaagtataacccagaagtcatccagccactggagatagctcagctcatccaggacttgggctttgaggcagcagtaatggaagactacacagactcagatggcgacctcgagctgatcatcacggggatgacctgcgcgtcctgtgttcacaacatagagtccaaactcacaaggacaaacggcatcacctatgcctctgtggcccttgccaccagcaaagcccacgtgaagttcgatcctgaagttatcggtgcacgggatattgtccgaattattgaggaaatcggctttcatgcttccccggcccagagaaaccccaacgcgcatcacttggaccacaaggtggaaataaagcagtggaagaagtctttcctgtgcagcctggtgttcggcatccctgtcatgggtctgatgatctatatgttggtgcccagcaacaagccccacgagtctatggtcctggaccacaacatcattccaggactgtccattctaaatctcatcttctttatcttgtgtacctttgtccagctccttggcgggtggtacttctacgtccaggcctacagatctctgaggcacagggcagccaacatggacgtgctcatcgtgctggccaccagcatcgcctacacctactcgctcgtcatcctggtggtggccatggctgagaaggcggagaggagccctgtgaccttcttcgacaccccccccatgctctttgtgttcattgccctgggtcggtggctggaacacgtggcaaagagcaaaacctcagaagcccttgccaaactcttgtctctccaagccacagaagccactgttgtgacccttggcgaggacaacttgatcatcagagaggagcaagtacccatggagctggtgcagcggggtgatatcatcaaagttgtccccgggggaaagttcccagtggatgggaaagtcctggaaggcaacaccatggccgacgagtccctcatcacaggagaagccatgccggtcacaaagaaacctggaagcacagtgattgctgggtctatcaatgcacacggctctgtgctcgttaatgccacccatgtgggcaatgacaccacgttggctcagattgtgaaattggtggaagaggctcagatgtcaaaggcacccattcagcaactggctgaccggtttagtggatattttgtcccatttatcatcatcatttcaacattgacgttggtggtatggattataatcggttttatcgattttggtgttgttcagaaatactttcctacccccaacaagcatatctcccagacagaggtgatcatccggtttgcattccagacatccatcacggtgctgtgcatcgcctgcccctgctccctgggcttggccacgcccacggcggtcatggtgggcaccggggtggccgcccagaatggcatcctcatcaaaggaggcaagcctctggagatggcccacaagataaagaccgtgatgtttgacaaaactggcaccattacccacggggtccccaaagtcatgagggtcctcctgcttgtggatgtggccacgatgcccctcaggaaggttcttgctgtggtggggactgcggaggccagcagcgagcaccctttgggcatggcagtcaccaagtactgtaaagaggaattgggaaccaagaccttgggatactgcacggacttccaggcagtgccgggctgtggcatcggctgcaaagtcagtagcgtggagggcatcctggcccacagcgagcaccagcagagcaaacaggctgctcccctgagcaggactggcggcgttcccgaggcaatagatgcgaccccccagaccttctctgtgctgattgggaaccgcgaatggatgaggcgcaacggcctaaccatttccagcgacatcagtgacgcgatgaaagatcatgagatgaaaggccagacggccatcctggtggccattgacggtgtgctctgcgccatgattgccatcgcggacgcagtcaagcaggaggcagccctggctgtgcacacgctgaagagcatgggtgtggacgtggttctgatcacaggggacaaccggaagacagccagagccatcgccacccaggttggcatcaacaaagtctttgcagaggtgctaccttctcacaaggtggccaaggtccaggagctccagaatgaagggaagaaagtcgccatggtgggagacggggtcaatgactcaccggccttggcccaggccgatgtgggcatcgccatcgggacaggcacggacgtcgccattgaggccgctgacgttgtcctcatcagaaacgatctgctcgatgtggtggctagcattcacctctccaagaggaccgtctggagaatacgcctcaatctggtgctggcgttgatttacaacctgatcggaatacccattgctgcagctataagaagcccgacctggagaggtatgaggcgcaggcccagggccgcatgaagcccctgacagcatcacaggtgagcgtgcacatcggcatggatgaccggcgacgggactccccaaggaccacgccctgggaccaggtcagcttcatcagtcaggtgtctctgtcctccttgaagtctgac
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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