2025-09-18 08:31:08, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS XM_073662634 6559 bp mRNA linear VRT 01-MAY-2025 DEFINITION PREDICTED: Phyllobates terribilis ATPase copper transporting beta (ATP7B), transcript variant X7, mRNA. ACCESSION XM_073662634 VERSION XM_073662634.1 DBLINK BioProject: PRJNA1254268 KEYWORDS RefSeq. SOURCE Phyllobates terribilis ORGANISM Phyllobates terribilis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Dendrobatidae; Dendrobatinae; Phyllobates. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_027362762) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_046119375.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/25/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6559 /organism="Phyllobates terribilis" /mol_type="mRNA" /strain="yellow" /db_xref="taxon:111132" /chromosome="Unknown" /sex="female" /tissue_type="liver" /dev_stage="adult" /geo_loc_name="USA" /collection_date="2023-04-17" /collected_by="Neil M Khosla" gene 1..6559 /gene="ATP7B" /note="ATPase copper transporting beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins" /db_xref="GeneID:141197116" CDS 193..4602 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X3" /protein_id="XP_073518735.1" /db_xref="GeneID:141197116" /translation="
MMSQKTFLKEEDEEEEVRLLDTTEDENAHQSSISHHYTSKNYGILKTNHTPPPRKPRFAFDNRGYDGSHNDLTDPCLEVSSVVVGIIGMTCQSCAQSIEGRISKIPSVVNIKVYLDKANAEVCYIPSEITPQKICEEIEDMGFDTNLDKCKELKGGLYKEEVVKMRVEGMTCQSCVNTIEGKIGKIQGVEKIKVSLANQEAMIVYCPQYIQPEDLRKQIDFMGFMASVKSKPDPTKLGPINIEHLQSISTDPKLKNTGRPIDNIIARTIHIEGMHCKSCVHNIEGSISGIPGVQNIKVSLENKNAVISLAEDVTSLLMLKKAIEALPPGHFKVTLPEDNERSPALQSKSNLCSSPNQSQRTSTRTASIRIGGMTCGSCVSTIENMISQRKGVQSISVSLPEGMGTILYIHTETTSEELRAAIEDMGFDATLISDSLLATSSDQLSSTLKPKLLETTKNANLHQDYIVDVPPKKPHPDIPLMENSSPQKCVLQVTGMTCASCVSTIERNLKKKDGIISVLVALMAGKAEVKYIANQIEPSEIAQLIENLGFGAVVLEDCTASHGSIELVITGMTCASCVHNIESRLMRTPGILQASVALATCKAQVKFDPEIVGPRDIIQIIEGIGFQASLSRREPSVHNLDHKEEIRQWRKSFLFSLIFGIPVICIMVYMLIANNNHHGQSVLDNNILPGLSIMNLIFFILCTLVQTFGGWYFYVQAYKSLKHKATNMDVLIVLATTIAYIYSVVILIVAIVEKSAQSPETFFDTPPMLFMFIALGRWLEHIAKSKTSEALAKLISLQATEATVLTLGPNHSVLREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGTSMADESLITGEPMPVRKKPGSMVIAGSINAHGSVLVEATHVGSDTTLAQIVKLVEEAQMSKAPIQQLADKISGYFVPFIISISIVTLIGWTTVGFVNFDVILKYFPDYSKTISKAEIIIRVGFQTAITVLSIACPCALGLATPTAVMVGTGVAAQNGILIKGGEPLEMAHKINTVMFDKTGTITHGVPKVMRVLLLGDVVRMPLKRMLAVVGTAEASSEHPLGMAMTNYCKEELGTQSLGYCTDFQAVPGCGISCKVNNVESVLVLSEEGINEQNVYISGLTHPQEDGSSIIAPELQGASAPQPHSVLIGNREWMRRNGLHISSDVDETMTSHEMKGQTAVLIAIDGTLCGMIAIADTVKQEAALAVHTLKAMGVDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVEALQNEGKKVAMVGDGVNDSPALARADIGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINFMFALIYNLVGIPIAAGVFLPVGLVLQPWMGSAAMAASSVSVVLSSLQLKCYRKPDSDRYEARAQGLMKPLTPSQISVHVGMDDRRRDIPMTSTWDQISYISQVSSSRNSRQDSPTGDRQDKWSLLINEAEDDQYM"
ORIGIN
tgagcgcagcctgcccggctgccggggaaaccaatgcctcactcataaaggctgacatgtgctcagcactgatggcagaggcggcggcggcggcggggtgcgggagtccagaggtcaccggctctgcacacactagtcaatggcagcagcgctgacgttgtgctggagcagagcggggactcgctagcaaagatgatgtctcaaaagacctttctgaaagaggaggatgaggaggaagaagtgcgattacttgacactacggaagatgaaaatgcccatcaatccagtatatctcaccattataccagcaagaactatggcatactcaagacaaaccatacaccaccaccaagaaaaccaagatttgctttcgacaacagaggctatgatggtagccacaatgacctcaccgacccatgccttgaagttagttcggttgtggtaggaattataggtatgacctgccagtcatgcgcccagtccattgaaggaagaatctcaaagataccaagtgtggttaacataaaggtttaccttgataaagccaatgcagaagtatgttacataccttccgaaataacaccacagaagatttgtgaggaaattgaagatatgggttttgataccaacctagataaatgcaaagaactgaaaggtggtctttataaagaggaagtagtaaaaatgagggtagagggtatgacgtgccagtcatgtgtcaataccattgaagggaaaattggaaaaattcaaggagtagaaaaaataaaggtttctcttgcaaaccaagaagcaatgattgtttattgtcctcagtatatccagccagaagacttacgaaagcagattgattttatggggtttatggcttctgtcaaaagcaaaccagatccaacaaaactcggaccaattaatattgaacatctacaaagtatctctacagaccccaagcttaagaatactggcagacctatagacaatataatagcaagaactattcatatagaagggatgcattgtaaatcatgtgtacacaacatagagggctccatctctggtatacctggtgttcagaacattaaagtctctctggagaacaaaaatgctgtaatatctcttgctgaggatgttactagcctactgatgttaaaaaaagcaattgaagctcttccaccaggacattttaaggttacccttccagaagataatgaacgcagtcctgcattacaatcaaaatcaaacctttgttcatctcctaatcaaagccaaagaacctccacaaggacggcgtcaatcaggatcggaggaatgacttgtgggtcttgtgtgtcaacgattgaaaatatgatctctcaaagaaagggagtccaatccatatcagtgtcattacctgaggggatgggaacaattctctatattcatacggaaactacctctgaggaattaagagcggctatagaagacatgggctttgacgctactcttatttctgattcactattggctactagcagtgaccagttaagctctacattgaagccaaagttactagagacaaccaagaatgcaaatctccatcaagattacattgtggatgttccccctaaaaagcctcacccagatatccctctgatggaaaatagttcaccgcagaaatgtgtcttacaagtcacagggatgacatgtgcctcatgtgtctccaccatcgagaggaacctgaagaagaaagatggtattatttccgtgctggttgcattgatggctggtaaagctgaggtcaaatacattgcaaaccagattgaaccatctgaaattgcacaacttattgaaaatctgggctttggagctgttgttttggaagattgcactgcatcccatggcagtatcgaactggtgattacaggtatgacatgtgcctcatgtgtccacaatattgaatcacgactgatgagaacgccaggtattctgcaagcctctgtggctcttgccacctgcaaagctcaagtcaagtttgatcctgaaattgttggtccccgagacatcatacaaatcattgaggggattggatttcaagcctctttatctagaagagagccatcagttcacaacctggaccataaagaagaaataagacagtggagaaagtccttcttgttcagcctcatatttggcatccccgtcatctgcatcatggtgtacatgttaatcgccaacaataatcaccacggacagtctgtgctggacaacaacatcctccctggtttatccataatgaacctcattttctttatactttgcacattagtccagacctttggtggatggtacttctatgtccaggcttacaagtctctgaaacacaaggcaaccaatatggatgtactcattgtcctggctaccaccattgcctatatttactctgtagttatcctgattgtggccattgtggagaagtcagcccagagcccagagaccttcttcgataccccccccatgttgttcatgttcatcgctctggggagatggcttgaacatatagcaaagagtaaaacttcagaagctcttgccaagctaatatccctgcaagctacagaggcgacagttctgacactaggacctaatcactcagtactaagggaagaacaagtggccgtggagcttgttcagaggggagatattgtgaaggttgttcccgggggcaaatttcctgtggatgggaaagttattgaagggacctctatggcggatgagtccttaatcacaggcgaacctatgcctgtgaggaagaagccaggaagcatggtcatcgctgggtccattaatgcccatggatcagtccttgtagaagcgacacacgtgggctccgacaccaccctggcgcaaatagttaagctggtagaagaggctcagatgtccaaggcgccaatccaacaactggcagataagataagtggctacttcgtccccttcataattagtatttccattgtgacattgattggatggactaccgttggctttgtgaattttgatgtcattctgaaatatttcccagattacagtaaaaccatctcgaaggctgagataatcatacgggttggcttccagactgccatcactgtgctgtctattgcctgtccttgtgctttaggtctggctacccccacggcagtgatggtgggtactggagtagctgcacaaaatggcatccttatcaaaggtggagagccgctggagatggcacataagataaatacagtgatgtttgataagactggaacaataacacatggggtccctaaagtgatgagagtgctgctgctgggtgatgtagtcaggatgccgctgaaacgaatgcttgccgtggtcggtactgcagaagccagcagtgagcatcccctgggaatggccatgacgaactactgcaaggaggagcttgggacacagtcactgggatattgtacagattttcaggcagtcccgggatgcggaatcagctgtaaagtgaataatgtagaaagtgtcctggtgctgagtgaggagggcataaatgagcagaatgtctacataagtggcctcacccatccacaggaggacggatcctcaatcattgctcccgagctacaaggtgcctcagctcctcaaccgcattctgtgttaattggaaaccgggaatggatgagacgcaatggactgcacatttccagtgatgtagatgaaaccatgactagtcatgaaatgaaaggacagactgcagtgctaatagctatagatggtacattatgtggaatgatcgctattgccgatacagtaaagcaggaggcagcgcttgctgtgcatacactaaaagcaatgggagtggatgtagtactgatcacaggagacaaccggaagactgccaaggcaatcgccactcaggttgggatcaagaaggtgtttgcagaagttcttccttctcacaaggtggccaaagtcgaagcattacaaaacgaagggaagaaagtagccatggtgggcgacggcgtcaatgactcccctgcattggccagagctgatattggcattgccattggcacaggaacagatgttgccattgaagctgcagatgttgtccttatcagaaatgatttgcttgatgttgtcgccagcattcacctctcaaagaggacggtgagaagaataagaattaacttcatgtttgcgctcatctataatcttgtcggcattcccattgcagcaggtgtattcctgccggtgggattggtgttacagccatggatgggatcagcagctatggcagcctcctctgtctcagtggttttgtcctctctacaactgaagtgctacaggaaaccagactctgatagatatgaagctcgagcccaggggctcatgaagccacttaccccatcacagataagtgttcatgtcgggatggatgaccggagaagagatatcccaatgaccagcacctgggatcagatcagctacatcagccaagtgtcatccagcagaaactcccgacaagattcaccaacaggcgacagacaagacaagtggtctcttctcatcaatgaggctgaggatgatcagtacatgtagcatcttgggtatacaccaggagatgaagaaccattgtctgtaataatgagacaatcattacggtctgcagtcatcacattcagcaatgatctgtagtgttaatggaataatgagcaaaattgctacactgaaacactataggaagagcagaatggatataagtgtatgggtgataacattctgatgttcttagcttgtattttcaagttctttaatgcttaaaattgcaaagtgcttgcaaaaaaaaggtactttgttcttgacagaatataagaagttaattatagagagatttttatttctatagtttactgctcgctggccatgttaccacttctgtagtctatcagcggtggttggtctccttcctaaaagagcttgtaagcactgctcagaagaggacagcatctcgctgcttccaatctgctttagtgtccatgtgtatctgcgacagtgcagagacaaaactgcatgtttgcagcacggcgcagtgcacatgttgtgccagtggtggcgctatgctgcagcttaggacaatcaatttagcaggagcgcatcgcctcccaacaagcaggaagctgcgaggctggggagcgatgccctcctggaaggttgtaatgagacaaaaccttttaggaattacacaataaggagattgagcctcggtgtaatggatactttattaggaggcaatgaaaatctccactaataattagaagccagataacgccattaccgaaatcatgtctgatatgaagataagtcggattcacccatccgtgtttcgtggtccaagtatgtaccgtgatgcacaggctggcaaccgggctgctcacccaaactatgcacccccatatatgcctatgaggcttttggaagtcaggtcaggagaccagcggctggtcggatgtgtgaatctgaggctatgtgcccacgatgcagagatgaagcagaaaatttccgcttcatttctgcatgtccttgcccggaaaaacgtgtgcggaatttgacacgcgtttttcacatgcggaattgccttgcgtttttctaatgcattgagaaggcaattctgcatgcgtaaacgcacaaataatgaacatgctgcggatttttccgcacatcaaaaacgctgcggaaaaatccgcagcatgggcattgaaagtgcgcattgtcattggggaccatggggggtggattaccaagcgtttcccaagcgtttacgctgcgcaaaaacgcttgaaaaacgcatcgtgggcacggaccctgaccctagagacaaatgatatgctggaagcgtttgaggtgccgcacagtatactgtcattatatataggggttgtccaggattacaaaaacatggctgctttcttccaaaaactatgagttgtgtagtacggcacctcaactccactgaagtgactggatctgagctgcaatatcatacaccacctttagacaagggtggccctggttttctaattctggttatccccctttatgaagaataacagattgggtcagttgagtgagtgcagtttactgttttttgtatctcaccttaaaccttgggattatagttatatcagtcggcccaaatgataagaaatttatggtaaaacctatcaacatgccataattgtctatgaagggaaaactcataggtcagcgcctcgtaacacgctccggctactgtactggcgaaggaattatagtaaacacatagtaatataattcattaacttgtgtagcaaaaggttaaaccaccaagcacttgaagggttaaactacaaagtcacatttatatagcgatctacaaaaaaaagctacgaaaatgtatagagtatagtgttgagagagtatgttctattaaccctttcgccgggtatgctcgggccgagctccgattatttatagctgctcggtgataaggttaaattgtgcctgtgtgcatgatttg
//
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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